RNA–Protein interactions for RNA: ENST00000497964.1

MACF1-226, Transcript of microtubule-actin crosslinking factor 1, humanhuman

TSL 2

Gene MACF1, Length 4,160 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MACF1-226ENST00000497964 LCA10Q71F78 164 aa4.39□□□□□ -1.71
MACF1-226ENST00000497964 SSBP3-AS1Q7Z2R9 100 aa4.39□□□□□ -1.71
MACF1-226ENST00000497964 PLA2G1BP04054 148 aaKnown RBP4.38□□□□□ -1.71
MACF1-226ENST00000497964 IGLV7-43P04211 117 aa4.38□□□□□ -1.71
MACF1-226ENST00000497964 PRAC1Q96KF2 57 aa4.38□□□□□ -1.71
MACF1-226ENST00000497964 LINC01558Q9Y6Z2 57 aa4.38□□□□□ -1.71
MACF1-226ENST00000497964 SPRR1BP22528 89 aa4.37□□□□□ -1.71
MACF1-226ENST00000497964 PANO1I0J062 215 aa4.37□□□□□ -1.71
MACF1-226ENST00000497964 KRTAP11-1Q8IUC1 163 aa4.37□□□□□ -1.71
MACF1-226ENST00000497964 Q8N1X5 172 aa4.36□□□□□ -1.71
MACF1-226ENST00000497964 OTOGQ6ZRI0 2925 aa4.35□□□□□ -1.71
MACF1-226ENST00000497964 NBPF19A0A087WUL8 3843 aa4.35□□□□□ -1.71
MACF1-226ENST00000497964 A0A0A0MQY5 61 aa4.35□□□□□ -1.71
MACF1-226ENST00000497964 LCE6AA0A183 80 aa4.35□□□□□ -1.71
MACF1-226ENST00000497964 VPS13CQ709C8 3753 aa4.33□□□□□ -1.72
MACF1-226ENST00000497964 FLG2Q5D862 2391 aaPredicted RBP4.33□□□□□ -1.72
MACF1-226ENST00000497964 A0A087X002 238 aa4.33□□□□□ -1.72
MACF1-226ENST00000497964 NOTCH2NLQ7Z3S9 236 aa4.33□□□□□ -1.72
MACF1-226ENST00000497964 WWC2-AS2Q96NR7 200 aa4.32□□□□□ -1.72
MACF1-226ENST00000497964 TENM2Q9NT68 2774 aa4.32□□□□□ -1.72
MACF1-226ENST00000497964 C9orf92A6NGG3 77 aa4.32□□□□□ -1.72
MACF1-226ENST00000497964 ZFHX3Q15911 3703 aa4.31□□□□□ -1.72
MACF1-226ENST00000497964 Q5W150 140 aa4.29□□□□□ -1.72
MACF1-226ENST00000497964 SMR3BP02814 79 aaPredicted RBP4.29□□□□□ -1.72
MACF1-226ENST00000497964 Q6ZR54 194 aa4.28□□□□□ -1.72
MACF1-226ENST00000497964 SRRM2Q9UQ35 2752 aaKnown RBP4.28□□□□□ -1.72
MACF1-226ENST00000497964 LINC00304Q8N9R0 145 aa4.27□□□□□ -1.73
MACF1-226ENST00000497964 PLAC8Q9NZF1 115 aa4.26□□□□□ -1.73
MACF1-226ENST00000497964 TGP01266 2768 aa4.26□□□□□ -1.73
MACF1-226ENST00000497964 LINC01554Q52M75 96 aa4.26□□□□□ -1.73
MACF1-226ENST00000497964 CSAG1Q6PB30 78 aa4.24□□□□□ -1.73
MACF1-226ENST00000497964 SPINT4Q6UDR6 99 aa4.23□□□□□ -1.73
MACF1-226ENST00000497964 TRRAPQ9Y4A5 3859 aa4.23□□□□□ -1.73
MACF1-226ENST00000497964 A6NN06 94 aa4.22□□□□□ -1.73
MACF1-226ENST00000497964 LINC00483Q53H64 154 aa4.22□□□□□ -1.73
MACF1-226ENST00000497964 A0A0D9SG42 100 aa4.22□□□□□ -1.73
MACF1-226ENST00000497964 DMAC1Q96GE9 116 aa4.22□□□□□ -1.73
MACF1-226ENST00000497964 ADM2Q7Z4H4 148 aa4.21□□□□□ -1.74
MACF1-226ENST00000497964 CRIPTQ9P021 101 aa4.21□□□□□ -1.74
MACF1-226ENST00000497964 A0A1B0GU33 70 aa4.2□□□□□ -1.74
MACF1-226ENST00000497964 KRTAP13-1Q8IUC0 172 aa4.18□□□□□ -1.74
MACF1-226ENST00000497964 KRTAP10-2P60368 255 aa4.18□□□□□ -1.74
MACF1-226ENST00000497964 Q6ZRN7 208 aaPredicted RBP4.17□□□□□ -1.74
MACF1-226ENST00000497964 KRTAP10-1P60331 282 aa4.13□□□□□ -1.75
MACF1-226ENST00000497964 SPATA8Q6RVD6 105 aa4.13□□□□□ -1.75
MACF1-226ENST00000497964 COL7A1Q02388 2944 aa4.13□□□□□ -1.75
MACF1-226ENST00000497964 FBN3Q75N90 2809 aa4.12□□□□□ -1.75
MACF1-226ENST00000497964 ZNF469Q96JG9 3925 aaPredicted RBP4.11□□□□□ -1.75
MACF1-226ENST00000497964 KRTAP13-2Q52LG2 175 aa4.09□□□□□ -1.75
MACF1-226ENST00000497964 ASB16-AS1Q495Z4 193 aa4.07□□□□□ -1.76
MACF1-226ENST00000497964 CSMD3Q7Z407 3707 aa4.06□□□□□ -1.76
MACF1-226ENST00000497964 H1FX-AS1Q4G0G2 97 aa4.04□□□□□ -1.76
MACF1-226ENST00000497964 ANK3Q12955 4377 aaKnown RBP4.02□□□□□ -1.77
MACF1-226ENST00000497964 RPL37P61927 97 aaKnown RBP4.01□□□□□ -1.77
MACF1-226ENST00000497964 MEGF8Q7Z7M0 2845 aa4.01□□□□□ -1.77
MACF1-226ENST00000497964 ROMO1P60602 79 aa3.98□□□□□ -1.77
MACF1-226ENST00000497964 COX6B2Q6YFQ2 88 aa3.98□□□□□ -1.77
MACF1-226ENST00000497964 KRTAP25-1Q3LHN0 102 aa3.98□□□□□ -1.77
MACF1-226ENST00000497964 S4R3F8 94 aa3.97□□□□□ -1.77
MACF1-226ENST00000497964 AKAP9Q99996 3911 aa3.96□□□□□ -1.77
MACF1-226ENST00000497964 Q6ZSA8 131 aa3.96□□□□□ -1.78
MACF1-226ENST00000497964 KRTAP13-3Q3SY46 172 aa3.94□□□□□ -1.78
MACF1-226ENST00000497964 KRTAP1-4P0C5Y4 121 aa3.93□□□□□ -1.78
MACF1-226ENST00000497964 LCE2BO14633 110 aa3.92□□□□□ -1.78
MACF1-226ENST00000497964 KRTAP16-1A8MUX0 517 aa3.92□□□□□ -1.78
MACF1-226ENST00000497964 H0YAA0 97 aa3.92□□□□□ -1.78
MACF1-226ENST00000497964 A8MUU9 505 aa3.9□□□□□ -1.79
MACF1-226ENST00000497964 R4GN34 69 aa3.88□□□□□ -1.79
MACF1-226ENST00000497964 LCE2AQ5TA79 106 aaPredicted RBP3.87□□□□□ -1.79
MACF1-226ENST00000497964 CAMK2N1Q7Z7J9 78 aa3.87□□□□□ -1.79
MACF1-226ENST00000497964 RPS29P62273 56 aaKnown RBP3.86□□□□□ -1.79
MACF1-226ENST00000497964 Q5VSD8 79 aa3.86□□□□□ -1.79
MACF1-226ENST00000497964 C20orf166-AS1Q96NR2 134 aa3.85□□□□□ -1.79
MACF1-226ENST00000497964 LUZP6Q538Z0 58 aa3.85□□□□□ -1.79
MACF1-226ENST00000497964 M0QZ58 72 aa3.85□□□□□ -1.79
MACF1-226ENST00000497964 NDUFAF8A1L188 74 aa3.84□□□□□ -1.79
MACF1-226ENST00000497964 C10orf95Q9H7T3 257 aa3.84□□□□□ -1.79
MACF1-226ENST00000497964 SEC61BP60468 96 aaKnown RBP3.83□□□□□ -1.8
MACF1-226ENST00000497964 LCE2CQ5TA81 110 aa3.79□□□□□ -1.8
MACF1-226ENST00000497964 P0C880 135 aa3.75□□□□□ -1.81
MACF1-226ENST00000497964 LORP23490 312 aaPredicted RBP3.75□□□□□ -1.81
MACF1-226ENST00000497964 KRTAP3-1Q9BYR8 98 aa3.73□□□□□ -1.81
MACF1-226ENST00000497964 HUWE1Q7Z6Z7 4374 aaKnown RBP3.72□□□□□ -1.81
MACF1-226ENST00000497964 DNAH10Q8IVF4 4471 aa3.72□□□□□ -1.81
MACF1-226ENST00000497964 XP32Q5T750 250 aa3.71□□□□□ -1.82
MACF1-226ENST00000497964 M0R2T5 61 aa3.65□□□□□ -1.82
MACF1-226ENST00000497964 TPRXLQ17RH7 258 aa3.64□□□□□ -1.83
MACF1-226ENST00000497964 KRTAP12-2P59991 146 aa3.63□□□□□ -1.83
MACF1-226ENST00000497964 KRTAP13-4Q3LI77 160 aa3.62□□□□□ -1.83
MACF1-226ENST00000497964 PLECQ15149 4684 aaKnown RBP3.61□□□□□ -1.83
MACF1-226ENST00000497964 KRTAP10-8P60410 259 aa3.61□□□□□ -1.83
MACF1-226ENST00000497964 PLAC4Q8WY50 150 aa3.6□□□□□ -1.83
MACF1-226ENST00000497964 KRTAP10-6P60371 365 aaPredicted RBP3.59□□□□□ -1.83
MACF1-226ENST00000497964 DNAH11Q96DT5 4516 aa3.58□□□□□ -1.84
MACF1-226ENST00000497964 ANK2Q01484 3957 aa3.58□□□□□ -1.84
MACF1-226ENST00000497964 DNAH9Q9NYC9 4486 aa3.56□□□□□ -1.84
MACF1-226ENST00000497964 KRTAP12-1P59990 96 aa3.56□□□□□ -1.84
MACF1-226ENST00000497964 DNAH1Q9P2D7 4330 aa3.55□□□□□ -1.84
MACF1-226ENST00000497964 A0A1B0GVY2 172 aa3.54□□□□□ -1.84
MACF1-226ENST00000497964 LYSTQ99698 3801 aa3.53□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms