RNA–Protein interactions for RNA: ENST00000497567.1

ATP13A3-210, Transcript of ATPase 13A3, humanhuman

TSL 4

Gene ATP13A3, Length 532 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP13A3-210ENST00000497567 IGF2RP11717 2491 aa0.36□□□□□ -2.35
ATP13A3-210ENST00000497567 CEP350Q5VT06 3117 aa0.35□□□□□ -2.35
ATP13A3-210ENST00000497567 H3BUX3 64 aa0.35□□□□□ -2.35
ATP13A3-210ENST00000497567 TNP1P09430 55 aa0.35□□□□□ -2.35
ATP13A3-210ENST00000497567 APELAP0DMC3 54 aa0.35□□□□□ -2.35
ATP13A3-210ENST00000497567 DEFB110Q30KQ9 67 aa0.35□□□□□ -2.35
ATP13A3-210ENST00000497567 CLPSL2Q6UWE3 100 aa0.35□□□□□ -2.35
ATP13A3-210ENST00000497567 USF3Q68DE3 2245 aa0.35□□□□□ -2.35
ATP13A3-210ENST00000497567 HIVEP3Q5T1R4 2406 aa0.35□□□□□ -2.35
ATP13A3-210ENST00000497567 A0A096LNI7 61 aa0.34□□□□□ -2.36
ATP13A3-210ENST00000497567 C9orf92A6NGG3 77 aa0.34□□□□□ -2.36
ATP13A3-210ENST00000497567 PTPN13Q12923 2485 aa0.34□□□□□ -2.36
ATP13A3-210ENST00000497567 U3KQA8 63 aa0.34□□□□□ -2.36
ATP13A3-210ENST00000497567 TNRC18O15417 2968 aaPredicted RBP0.34□□□□□ -2.36
ATP13A3-210ENST00000497567 VWFP04275 2813 aa0.34□□□□□ -2.36
ATP13A3-210ENST00000497567 CELSR3Q9NYQ7 3312 aa0.34□□□□□ -2.36
ATP13A3-210ENST00000497567 NCOR1O75376 2440 aa0.34□□□□□ -2.36
ATP13A3-210ENST00000497567 SPTA1P02549 2419 aa0.34□□□□□ -2.36
ATP13A3-210ENST00000497567 GVINP1Q7Z2Y8 2422 aa0.34□□□□□ -2.36
ATP13A3-210ENST00000497567 APC2O95996 2303 aa0.33□□□□□ -2.36
ATP13A3-210ENST00000497567 ACACAQ13085 2346 aa0.33□□□□□ -2.36
ATP13A3-210ENST00000497567 SETXQ7Z333 2677 aaKnown RBP0.33□□□□□ -2.36
ATP13A3-210ENST00000497567 PCNTO95613 3336 aa0.33□□□□□ -2.36
ATP13A3-210ENST00000497567 CSPG4Q6UVK1 2322 aa0.33□□□□□ -2.36
ATP13A3-210ENST00000497567 PCNX1Q96RV3 2341 aa0.33□□□□□ -2.36
ATP13A3-210ENST00000497567 ZFYVE26Q68DK2 2539 aa0.33□□□□□ -2.36
ATP13A3-210ENST00000497567 COL6A5A8TX70 2615 aa0.33□□□□□ -2.36
ATP13A3-210ENST00000497567 TEP1Q99973 2627 aaKnown RBP0.33□□□□□ -2.36
ATP13A3-210ENST00000497567 RYR1P21817 5038 aa0.32□□□□□ -2.36
ATP13A3-210ENST00000497567 WNK1Q9H4A3 2382 aa0.32□□□□□ -2.36
ATP13A3-210ENST00000497567 HYDINQ4G0P3 5121 aa0.32□□□□□ -2.36
ATP13A3-210ENST00000497567 EP300Q09472 2414 aaPredicted RBP0.32□□□□□ -2.36
ATP13A3-210ENST00000497567 HECTD1Q9ULT8 2610 aa0.32□□□□□ -2.36
ATP13A3-210ENST00000497567 STATHP02808 62 aa0.32□□□□□ -2.36
ATP13A3-210ENST00000497567 CD52P31358 61 aa0.32□□□□□ -2.36
ATP13A3-210ENST00000497567 DEFB136Q30KP8 78 aa0.32□□□□□ -2.36
ATP13A3-210ENST00000497567 DEFB108BQ8NET1 73 aa0.32□□□□□ -2.36
ATP13A3-210ENST00000497567 CHD9Q3L8U1 2897 aa0.31□□□□□ -2.36
ATP13A3-210ENST00000497567 CEP290O15078 2479 aa0.31□□□□□ -2.36
ATP13A3-210ENST00000497567 KMT2DO14686 5537 aa0.31□□□□□ -2.36
ATP13A3-210ENST00000497567 EPPK1P58107 5090 aaKnown RBP0.31□□□□□ -2.36
ATP13A3-210ENST00000497567 NBASA2RRP1 2371 aa0.31□□□□□ -2.36
ATP13A3-210ENST00000497567 SSPOA2VEC9 5147 aa0.31□□□□□ -2.36
ATP13A3-210ENST00000497567 DEFB133Q30KQ1 61 aa0.31□□□□□ -2.36
ATP13A3-210ENST00000497567 Q9Y3F1 56 aa0.31□□□□□ -2.36
ATP13A3-210ENST00000497567 OTOGQ6ZRI0 2925 aa0.31□□□□□ -2.36
ATP13A3-210ENST00000497567 MAP1BP46821 2468 aaKnown RBP0.31□□□□□ -2.36
ATP13A3-210ENST00000497567 CSMD3Q7Z407 3707 aa0.31□□□□□ -2.36
ATP13A3-210ENST00000497567 PIEZO2Q9H5I5 2752 aa0.31□□□□□ -2.36
ATP13A3-210ENST00000497567 CHD8Q9HCK8 2581 aa0.31□□□□□ -2.36
ATP13A3-210ENST00000497567 WDFY4Q6ZS81 3184 aa0.31□□□□□ -2.36
ATP13A3-210ENST00000497567 TENM4Q6N022 2769 aa0.3□□□□□ -2.36
ATP13A3-210ENST00000497567 STAB1Q9NY15 2570 aa0.3□□□□□ -2.36
ATP13A3-210ENST00000497567 MAST4O15021 2626 aa0.3□□□□□ -2.36
ATP13A3-210ENST00000497567 A0A096LPF7 62 aa0.3□□□□□ -2.36
ATP13A3-210ENST00000497567 CHD6Q8TD26 2715 aa0.3□□□□□ -2.36
ATP13A3-210ENST00000497567 MTORP42345 2549 aa0.3□□□□□ -2.36
ATP13A3-210ENST00000497567 KMT2CQ8NEZ4 4911 aaKnown RBP0.3□□□□□ -2.36
ATP13A3-210ENST00000497567 FAM186AA6NE01 2351 aa0.3□□□□□ -2.36
ATP13A3-210ENST00000497567 RNF213Q63HN8 5207 aa0.3□□□□□ -2.36
ATP13A3-210ENST00000497567 NCOR2Q9Y618 2525 aa0.29□□□□□ -2.36
ATP13A3-210ENST00000497567 USP9XQ93008 2570 aaPredicted RBP0.29□□□□□ -2.36
ATP13A3-210ENST00000497567 SETD2Q9BYW2 2564 aaPredicted RBP0.29□□□□□ -2.36
ATP13A3-210ENST00000497567 HTN3P15516 51 aa0.29□□□□□ -2.36
ATP13A3-210ENST00000497567 DEFB1P60022 68 aa0.29□□□□□ -2.36
ATP13A3-210ENST00000497567 DEFB124Q8NES8 71 aa0.29□□□□□ -2.36
ATP13A3-210ENST00000497567 LAMA2P24043 3122 aaKnown RBP0.29□□□□□ -2.36
ATP13A3-210ENST00000497567 CEP250Q9BV73 2442 aa0.29□□□□□ -2.36
ATP13A3-210ENST00000497567 DMBT1Q9UGM3 2413 aaPredicted RBP0.29□□□□□ -2.36
ATP13A3-210ENST00000497567 KALRNO60229 2985 aa0.29□□□□□ -2.36
ATP13A3-210ENST00000497567 RYR2Q92736 4967 aa0.29□□□□□ -2.36
ATP13A3-210ENST00000497567 SZT2Q5T011 3432 aa0.29□□□□□ -2.36
ATP13A3-210ENST00000497567 BSNQ9UPA5 3926 aa0.29□□□□□ -2.36
ATP13A3-210ENST00000497567 ZNF292O60281 2723 aa0.29□□□□□ -2.36
ATP13A3-210ENST00000497567 NBEAL2Q6ZNJ1 2754 aa0.28□□□□□ -2.36
ATP13A3-210ENST00000497567 ABCA13Q86UQ4 5058 aa0.28□□□□□ -2.36
ATP13A3-210ENST00000497567 LINC01556Q5JQF7 62 aa0.28□□□□□ -2.36
ATP13A3-210ENST00000497567 RIF1Q5UIP0 2472 aaKnown RBP0.28□□□□□ -2.36
ATP13A3-210ENST00000497567 CCDC168Q8NDH2 2452 aa0.28□□□□□ -2.36
ATP13A3-210ENST00000497567 RYR3Q15413 4870 aa0.28□□□□□ -2.37
ATP13A3-210ENST00000497567 DNHD1Q96M86 4753 aa0.28□□□□□ -2.37
ATP13A3-210ENST00000497567 CSMD1Q96PZ7 3565 aa0.27□□□□□ -2.37
ATP13A3-210ENST00000497567 COL12A1Q99715 3063 aa0.27□□□□□ -2.37
ATP13A3-210ENST00000497567 PDZD2O15018 2839 aa0.27□□□□□ -2.37
ATP13A3-210ENST00000497567 ZANQ9Y493 2812 aa0.27□□□□□ -2.37
ATP13A3-210ENST00000497567 VCANP13611 3396 aa0.26□□□□□ -2.37
ATP13A3-210ENST00000497567 EYSQ5T1H1 3165 aa0.26□□□□□ -2.37
ATP13A3-210ENST00000497567 COX14Q96I36 57 aa0.26□□□□□ -2.37
ATP13A3-210ENST00000497567 HERC1Q15751 4861 aa0.26□□□□□ -2.37
ATP13A3-210ENST00000497567 SPG11Q96JI7 2443 aa0.26□□□□□ -2.37
ATP13A3-210ENST00000497567 ANKHD1Q8IWZ3 2542 aaKnown RBP0.26□□□□□ -2.37
ATP13A3-210ENST00000497567 MYO18BQ8IUG5 2567 aa0.26□□□□□ -2.37
ATP13A3-210ENST00000497567 CFAP47Q6ZTR5 3102 aa0.25□□□□□ -2.37
ATP13A3-210ENST00000497567 BOD1L1Q8NFC6 3051 aa0.25□□□□□ -2.37
ATP13A3-210ENST00000497567 SONP18583 2426 aaKnown RBP0.25□□□□□ -2.37
ATP13A3-210ENST00000497567 BIRC6Q9NR09 4857 aa0.25□□□□□ -2.37
ATP13A3-210ENST00000497567 PRM1P04553 51 aa0.25□□□□□ -2.37
ATP13A3-210ENST00000497567 RPS29P62273 56 aaKnown RBP0.25□□□□□ -2.37
ATP13A3-210ENST00000497567 KRTAP20-1Q3LI63 56 aa0.25□□□□□ -2.37
ATP13A3-210ENST00000497567 UBR5O95071 2799 aaPredicted RBP0.25□□□□□ -2.37
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms