RNA–Protein interactions for RNA: ENST00000496840.1

TARDBP-210, Transcript of TAR DNA binding protein, humanhuman

TSL 3

Gene TARDBP, Length 692 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-210ENST00000496840 H3BUA1 57 aa-0.36□□□□□ -2.47
TARDBP-210ENST00000496840 K7EMI3 77 aa-0.36□□□□□ -2.47
TARDBP-210ENST00000496840 M0R1W7 72 aa-0.36□□□□□ -2.47
TARDBP-210ENST00000496840 ANKRD36CQ5JPF3 1778 aa-0.37□□□□□ -2.47
TARDBP-210ENST00000496840 IGLV5-48A0A075B6I7 105 aa-0.37□□□□□ -2.47
TARDBP-210ENST00000496840 A0A087WWC5 75 aa-0.37□□□□□ -2.47
TARDBP-210ENST00000496840 MXRA5Q9NR99 2828 aa-0.37□□□□□ -2.47
TARDBP-210ENST00000496840 KMT2CQ8NEZ4 4911 aaKnown RBP-0.38□□□□□ -2.47
TARDBP-210ENST00000496840 VPS13BQ7Z7G8 4022 aa-0.38□□□□□ -2.47
TARDBP-210ENST00000496840 TOGARAM1Q9Y4F4 1720 aa-0.38□□□□□ -2.47
TARDBP-210ENST00000496840 MROH1Q8NDA8 1641 aa-0.38□□□□□ -2.47
TARDBP-210ENST00000496840 SERF2P84101 59 aa-0.39□□□□□ -2.47
TARDBP-210ENST00000496840 NMES1Q9C002 83 aa-0.39□□□□□ -2.47
TARDBP-210ENST00000496840 NOP10Q9NPE3 64 aaKnown RBP-0.39□□□□□ -2.47
TARDBP-210ENST00000496840 ANK3Q12955 4377 aaKnown RBP-0.39□□□□□ -2.47
TARDBP-210ENST00000496840 PKD1L2Q7Z442 2459 aa-0.39□□□□□ -2.47
TARDBP-210ENST00000496840 HTTP42858 3142 aa-0.39□□□□□ -2.47
TARDBP-210ENST00000496840 DNAH6Q9C0G6 4158 aa-0.39□□□□□ -2.47
TARDBP-210ENST00000496840 PKHD1L1Q86WI1 4243 aa-0.4□□□□□ -2.47
TARDBP-210ENST00000496840 FASNP49327 2511 aaKnown RBP-0.4□□□□□ -2.47
TARDBP-210ENST00000496840 AKAP9Q99996 3911 aa-0.4□□□□□ -2.47
TARDBP-210ENST00000496840 MMP24-AS1A0A0U1RRL7 71 aa-0.4□□□□□ -2.47
TARDBP-210ENST00000496840 S100ZQ8WXG8 99 aa-0.4□□□□□ -2.47
TARDBP-210ENST00000496840 CLASP1Q7Z460 1538 aa-0.4□□□□□ -2.47
TARDBP-210ENST00000496840 HIVEP1P15822 2718 aa-0.4□□□□□ -2.47
TARDBP-210ENST00000496840 ZZEF1O43149 2961 aa-0.4□□□□□ -2.47
TARDBP-210ENST00000496840 MTORP42345 2549 aa-0.4□□□□□ -2.47
TARDBP-210ENST00000496840 EPG5Q9HCE0 2579 aa-0.41□□□□□ -2.47
TARDBP-210ENST00000496840 APOBP04114 4563 aaKnown RBP-0.41□□□□□ -2.48
TARDBP-210ENST00000496840 TACC2O95359 2948 aa-0.41□□□□□ -2.48
TARDBP-210ENST00000496840 GCN1Q92616 2671 aaKnown RBP-0.41□□□□□ -2.48
TARDBP-210ENST00000496840 NBPF19A0A087WUL8 3843 aa-0.42□□□□□ -2.48
TARDBP-210ENST00000496840 BPTFQ12830 3046 aa-0.42□□□□□ -2.48
TARDBP-210ENST00000496840 ANKRD11Q6UB99 2663 aaPredicted RBP-0.42□□□□□ -2.48
TARDBP-210ENST00000496840 CEP290O15078 2479 aa-0.43□□□□□ -2.48
TARDBP-210ENST00000496840 KRTAP20-2Q3LI61 65 aa-0.43□□□□□ -2.48
TARDBP-210ENST00000496840 HERC1Q15751 4861 aa-0.43□□□□□ -2.48
TARDBP-210ENST00000496840 STARD9Q9P2P6 4700 aa-0.43□□□□□ -2.48
TARDBP-210ENST00000496840 TIAM1Q13009 1591 aa-0.44□□□□□ -2.48
TARDBP-210ENST00000496840 EEA1Q15075 1411 aa-0.44□□□□□ -2.48
TARDBP-210ENST00000496840 ABCA6Q8N139 1617 aa-0.44□□□□□ -2.48
TARDBP-210ENST00000496840 TNP1P09430 55 aa-0.44□□□□□ -2.48
TARDBP-210ENST00000496840 TMEM167BQ9NRX6 74 aa-0.44□□□□□ -2.48
TARDBP-210ENST00000496840 ABRACLQ9P1F3 81 aa-0.44□□□□□ -2.48
TARDBP-210ENST00000496840 ANKHD1Q8IWZ3 2542 aaKnown RBP-0.44□□□□□ -2.48
TARDBP-210ENST00000496840 VPS13DQ5THJ4 4388 aa-0.45□□□□□ -2.48
TARDBP-210ENST00000496840 SACSQ9NZJ4 4579 aa-0.45□□□□□ -2.48
TARDBP-210ENST00000496840 TEP1Q99973 2627 aaKnown RBP-0.45□□□□□ -2.48
TARDBP-210ENST00000496840 SMIM31A0A1B0GVY4 71 aa-0.45□□□□□ -2.48
TARDBP-210ENST00000496840 IGIPA6NJ69 53 aa-0.45□□□□□ -2.48
TARDBP-210ENST00000496840 KALRNO60229 2985 aa-0.45□□□□□ -2.48
TARDBP-210ENST00000496840 SMIM5Q71RC9 77 aa-0.45□□□□□ -2.48
TARDBP-210ENST00000496840 LINC00308Q8TCZ7 52 aa-0.45□□□□□ -2.48
TARDBP-210ENST00000496840 FAT1Q14517 4588 aa-0.45□□□□□ -2.48
TARDBP-210ENST00000496840 CCDC180Q9P1Z9 1646 aa-0.46□□□□□ -2.48
TARDBP-210ENST00000496840 UTP20O75691 2785 aaKnown RBP-0.46□□□□□ -2.48
TARDBP-210ENST00000496840 DNAH3Q8TD57 4116 aa-0.46□□□□□ -2.48
TARDBP-210ENST00000496840 GLI2P10070 1586 aa-0.46□□□□□ -2.48
TARDBP-210ENST00000496840 DOPEY1Q5JWR5 2465 aa-0.46□□□□□ -2.48
TARDBP-210ENST00000496840 TRIOO75962 3097 aa-0.47□□□□□ -2.48
TARDBP-210ENST00000496840 LAMA1P25391 3075 aa-0.47□□□□□ -2.48
TARDBP-210ENST00000496840 MT4P47944 62 aa-0.47□□□□□ -2.48
TARDBP-210ENST00000496840 KAAG1Q9UBP8 84 aa-0.47□□□□□ -2.48
TARDBP-210ENST00000496840 CROCC2H7BZ55 1655 aa-0.47□□□□□ -2.48
TARDBP-210ENST00000496840 CPS1P31327 1500 aa-0.48□□□□□ -2.49
TARDBP-210ENST00000496840 DNAH11Q96DT5 4516 aa-0.48□□□□□ -2.49
TARDBP-210ENST00000496840 LY75O60449 1722 aa-0.48□□□□□ -2.49
TARDBP-210ENST00000496840 CDC42BPAQ5VT25 1732 aa-0.49□□□□□ -2.49
TARDBP-210ENST00000496840 LRRK2Q5S007 2527 aa-0.49□□□□□ -2.49
TARDBP-210ENST00000496840 SMIM27A0A1W2PRY6 76 aa-0.49□□□□□ -2.49
TARDBP-210ENST00000496840 M0QY20 66 aa-0.49□□□□□ -2.49
TARDBP-210ENST00000496840 MUC17Q685J3 4493 aa-0.49□□□□□ -2.49
TARDBP-210ENST00000496840 NBEAQ8NFP9 2946 aa-0.49□□□□□ -2.49
TARDBP-210ENST00000496840 RNF213Q63HN8 5207 aa-0.49□□□□□ -2.49
TARDBP-210ENST00000496840 UGGT1Q9NYU2 1555 aa-0.49□□□□□ -2.49
TARDBP-210ENST00000496840 MGAM2Q2M2H8 2515 aa-0.49□□□□□ -2.49
TARDBP-210ENST00000496840 USH2AO75445 5202 aa-0.5□□□□□ -2.49
TARDBP-210ENST00000496840 ACACAQ13085 2346 aa-0.5□□□□□ -2.49
TARDBP-210ENST00000496840 H0YGX0 51 aa-0.5□□□□□ -2.49
TARDBP-210ENST00000496840 DEFB1P60022 68 aa-0.5□□□□□ -2.49
TARDBP-210ENST00000496840 KRTAP19-5Q3LI72 72 aa-0.5□□□□□ -2.49
TARDBP-210ENST00000496840 CLPSL2Q6UWE3 100 aa-0.5□□□□□ -2.49
TARDBP-210ENST00000496840 MYO18BQ8IUG5 2567 aa-0.5□□□□□ -2.49
TARDBP-210ENST00000496840 ABCA10Q8WWZ4 1543 aa-0.5□□□□□ -2.49
TARDBP-210ENST00000496840 RYR3Q15413 4870 aa-0.5□□□□□ -2.49
TARDBP-210ENST00000496840 UBR4Q5T4S7 5183 aa-0.51□□□□□ -2.49
TARDBP-210ENST00000496840 ACACBO00763 2458 aa-0.51□□□□□ -2.49
TARDBP-210ENST00000496840 DNAH2Q9P225 4427 aa-0.52□□□□□ -2.49
TARDBP-210ENST00000496840 NBEAL2Q6ZNJ1 2754 aa-0.52□□□□□ -2.49
TARDBP-210ENST00000496840 WFDC10BQ8IUB3 73 aa-0.52□□□□□ -2.49
TARDBP-210ENST00000496840 WDR87Q6ZQQ6 2873 aa-0.52□□□□□ -2.49
TARDBP-210ENST00000496840 FAM186AA6NE01 2351 aa-0.53□□□□□ -2.49
TARDBP-210ENST00000496840 EFCAB6Q5THR3 1501 aa-0.53□□□□□ -2.49
TARDBP-210ENST00000496840 RANBP2P49792 3224 aaKnown RBP-0.53□□□□□ -2.49
TARDBP-210ENST00000496840 MT1HP80294 61 aa-0.53□□□□□ -2.49
TARDBP-210ENST00000496840 DNAH1Q9P2D7 4330 aa-0.53□□□□□ -2.49
TARDBP-210ENST00000496840 MAST1Q9Y2H9 1570 aa-0.53□□□□□ -2.49
TARDBP-210ENST00000496840 PRXQ9BXM0 1461 aa-0.54□□□□□ -2.5
TARDBP-210ENST00000496840 M0QZ58 72 aa-0.54□□□□□ -2.5
TARDBP-210ENST00000496840 SMR3BP02814 79 aaPredicted RBP-0.54□□□□□ -2.5
Retrieved 100 of 20,778 RNA–protein pairs in 69.8 ms