RNA–Protein interactions for RNA: ENST00000495910.6

NF1-216, Transcript of neurofibromin 1, humanhuman

TSL 2

Gene NF1, Length 8,223 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NF1-216ENST00000495910 LAMA3Q16787 3333 aa2.72□□□□□ -1.97
NF1-216ENST00000495910 TNRC18O15417 2968 aaPredicted RBP2.72□□□□□ -1.97
NF1-216ENST00000495910 SPTBN5Q9NRC6 3674 aaKnown RBP2.72□□□□□ -1.97
NF1-216ENST00000495910 FLNCQ14315 2725 aa2.72□□□□□ -1.97
NF1-216ENST00000495910 KRTAP10-10P60014 251 aa2.71□□□□□ -1.98
NF1-216ENST00000495910 CDH23Q9H251 3354 aa2.71□□□□□ -1.98
NF1-216ENST00000495910 DNAH14Q0VDD8 3507 aa2.7□□□□□ -1.98
NF1-216ENST00000495910 KRTAP13-1Q8IUC0 172 aa2.69□□□□□ -1.98
NF1-216ENST00000495910 ITPR1Q14643 2758 aa2.67□□□□□ -1.98
NF1-216ENST00000495910 KRTAP13-4Q3LI77 160 aa2.66□□□□□ -1.98
NF1-216ENST00000495910 KALRNO60229 2985 aa2.66□□□□□ -1.98
NF1-216ENST00000495910 TACC2O95359 2948 aa2.66□□□□□ -1.98
NF1-216ENST00000495910 KRTAP15-1Q3LI76 137 aa2.66□□□□□ -1.98
NF1-216ENST00000495910 NBEAQ8NFP9 2946 aa2.65□□□□□ -1.98
NF1-216ENST00000495910 ZZEF1O43149 2961 aa2.65□□□□□ -1.99
NF1-216ENST00000495910 XP32Q5T750 250 aa2.65□□□□□ -1.99
NF1-216ENST00000495910 CELSR3Q9NYQ7 3312 aa2.65□□□□□ -1.99
NF1-216ENST00000495910 KRTAP7-1Q8IUC3 87 aa2.64□□□□□ -1.99
NF1-216ENST00000495910 NBEAL2Q6ZNJ1 2754 aa2.64□□□□□ -1.99
NF1-216ENST00000495910 UBR5O95071 2799 aaPredicted RBP2.63□□□□□ -1.99
NF1-216ENST00000495910 ASH1LQ9NR48 2969 aaKnown RBP2.63□□□□□ -1.99
NF1-216ENST00000495910 ZFHX3Q15911 3703 aa2.62□□□□□ -1.99
NF1-216ENST00000495910 CRYBG3Q68DQ2 2970 aa2.62□□□□□ -1.99
NF1-216ENST00000495910 NBPF19A0A087WUL8 3843 aa2.61□□□□□ -1.99
NF1-216ENST00000495910 DMXL2Q8TDJ6 3036 aa2.61□□□□□ -1.99
NF1-216ENST00000495910 SZT2Q5T011 3432 aa2.61□□□□□ -1.99
NF1-216ENST00000495910 REV3LO60673 3130 aa2.6□□□□□ -1.99
NF1-216ENST00000495910 TPRXLQ17RH7 258 aa2.6□□□□□ -1.99
NF1-216ENST00000495910 BOD1L1Q8NFC6 3051 aa2.6□□□□□ -1.99
NF1-216ENST00000495910 NIPBLQ6KC79 2804 aaeCLIP2.59□□□□□ -1.99
NF1-216ENST00000495910 COL6A3P12111 3177 aa2.59□□□□□ -1.99
NF1-216ENST00000495910 KRTAP17-1Q9BYP8 105 aa2.59□□□□□ -2
NF1-216ENST00000495910 TENM1Q9UKZ4 2725 aa2.58□□□□□ -2
NF1-216ENST00000495910 VCANP13611 3396 aa2.58□□□□□ -2
NF1-216ENST00000495910 HIVEP1P15822 2718 aa2.58□□□□□ -2
NF1-216ENST00000495910 HRNRQ86YZ3 2850 aaPredicted RBP2.57□□□□□ -2
NF1-216ENST00000495910 DMXL1Q9Y485 3027 aa2.57□□□□□ -2
NF1-216ENST00000495910 UNC80Q8N2C7 3258 aa2.57□□□□□ -2
NF1-216ENST00000495910 NF1P21359 2839 aa2.56□□□□□ -2
NF1-216ENST00000495910 ATMQ13315 3056 aa2.56□□□□□ -2
NF1-216ENST00000495910 KRTAP23-1A1A580 65 aa2.56□□□□□ -2
NF1-216ENST00000495910 ZANQ9Y493 2812 aa2.55□□□□□ -2
NF1-216ENST00000495910 CELSR2Q9HCU4 2923 aa2.55□□□□□ -2
NF1-216ENST00000495910 ADGRG4Q8IZF6 3080 aa2.54□□□□□ -2
NF1-216ENST00000495910 COL12A1Q99715 3063 aa2.54□□□□□ -2
NF1-216ENST00000495910 KRTAP12-1P59990 96 aa2.54□□□□□ -2
NF1-216ENST00000495910 SPENQ96T58 3664 aaKnown RBP2.53□□□□□ -2
NF1-216ENST00000495910 FREM2Q5SZK8 3169 aa2.52□□□□□ -2.01
NF1-216ENST00000495910 CELSR1Q9NYQ6 3014 aa2.52□□□□□ -2.01
NF1-216ENST00000495910 WDFY3Q8IZQ1 3526 aa2.51□□□□□ -2.01
NF1-216ENST00000495910 EYSQ5T1H1 3165 aa2.51□□□□□ -2.01
NF1-216ENST00000495910 MXRA5Q9NR99 2828 aa2.51□□□□□ -2.01
NF1-216ENST00000495910 SPEGQ15772 3267 aa2.5□□□□□ -2.01
NF1-216ENST00000495910 KRTAP1-4P0C5Y4 121 aa2.5□□□□□ -2.01
NF1-216ENST00000495910 FBN2P35556 2912 aa2.49□□□□□ -2.01
NF1-216ENST00000495910 KRTAP13-3Q3SY46 172 aa2.49□□□□□ -2.01
NF1-216ENST00000495910 DCHS2Q6V1P9 2916 aa2.49□□□□□ -2.01
NF1-216ENST00000495910 LCE2DQ5TA82 110 aaPredicted RBP2.48□□□□□ -2.01
NF1-216ENST00000495910 TGP01266 2768 aa2.48□□□□□ -2.01
NF1-216ENST00000495910 MYO15AQ9UKN7 3530 aa2.48□□□□□ -2.01
NF1-216ENST00000495910 CRCT1Q9UGL9 99 aa2.47□□□□□ -2.01
NF1-216ENST00000495910 AKAP9Q99996 3911 aa2.47□□□□□ -2.01
NF1-216ENST00000495910 ASPMQ8IZT6 3477 aa2.46□□□□□ -2.02
NF1-216ENST00000495910 TENM4Q6N022 2769 aa2.46□□□□□ -2.02
NF1-216ENST00000495910 TENM2Q9NT68 2774 aa2.46□□□□□ -2.02
NF1-216ENST00000495910 LOC400499M0QZD8 3231 aa2.45□□□□□ -2.02
NF1-216ENST00000495910 LAMA5O15230 3695 aa2.45□□□□□ -2.02
NF1-216ENST00000495910 TENM3Q9P273 2699 aa2.45□□□□□ -2.02
NF1-216ENST00000495910 BSNQ9UPA5 3926 aa2.45□□□□□ -2.02
NF1-216ENST00000495910 PDZD2O15018 2839 aa2.44□□□□□ -2.02
NF1-216ENST00000495910 DMDP11532 3685 aa2.43□□□□□ -2.02
NF1-216ENST00000495910 CFAP47Q6ZTR5 3102 aa2.43□□□□□ -2.02
NF1-216ENST00000495910 KRTAP10-6P60371 365 aaPredicted RBP2.42□□□□□ -2.02
NF1-216ENST00000495910 VPS13CQ709C8 3753 aa2.4□□□□□ -2.03
NF1-216ENST00000495910 ZFHX4Q86UP3 3567 aa2.4□□□□□ -2.03
NF1-216ENST00000495910 VWFP04275 2813 aa2.39□□□□□ -2.03
NF1-216ENST00000495910 KRTAP10-12P60413 245 aa2.38□□□□□ -2.03
NF1-216ENST00000495910 PKD1L1Q8TDX9 2849 aa2.37□□□□□ -2.03
NF1-216ENST00000495910 COL7A1Q02388 2944 aa2.37□□□□□ -2.03
NF1-216ENST00000495910 KRTAP10-5P60370 271 aa2.37□□□□□ -2.03
NF1-216ENST00000495910 TRRAPQ9Y4A5 3859 aa2.36□□□□□ -2.03
NF1-216ENST00000495910 SMG1Q96Q15 3661 aaKnown RBP2.36□□□□□ -2.03
NF1-216ENST00000495910 KRTAP10-7P60409 375 aaPredicted RBP2.35□□□□□ -2.03
NF1-216ENST00000495910 MUC3AQ02505 3323 aa2.34□□□□□ -2.03
NF1-216ENST00000495910 KRTAP12-3P60328 96 aa2.33□□□□□ -2.04
NF1-216ENST00000495910 RELNP78509 3460 aa2.33□□□□□ -2.04
NF1-216ENST00000495910 KRTAP3-1Q9BYR8 98 aa2.31□□□□□ -2.04
NF1-216ENST00000495910 FBN1P35555 2871 aaKnown RBP2.3□□□□□ -2.04
NF1-216ENST00000495910 CMYA5Q8N3K9 4069 aa2.29□□□□□ -2.04
NF1-216ENST00000495910 KRTAP3-3Q9BYR6 98 aa2.28□□□□□ -2.04
NF1-216ENST00000495910 KRTAP3-2Q9BYR7 98 aa2.28□□□□□ -2.04
NF1-216ENST00000495910 RYR1P21817 5038 aa2.27□□□□□ -2.05
NF1-216ENST00000495910 DCHS1Q96JQ0 3298 aa2.27□□□□□ -2.05
NF1-216ENST00000495910 CSMD1Q96PZ7 3565 aa2.26□□□□□ -2.05
NF1-216ENST00000495910 LCE3AQ5TA76 89 aa2.25□□□□□ -2.05
NF1-216ENST00000495910 ZNF469Q96JG9 3925 aaPredicted RBP2.25□□□□□ -2.05
NF1-216ENST00000495910 DNAH7Q8WXX0 4024 aa2.24□□□□□ -2.05
NF1-216ENST00000495910 MEGF8Q7Z7M0 2845 aa2.21□□□□□ -2.06
NF1-216ENST00000495910 ALMS1Q8TCU4 4167 aa2.21□□□□□ -2.06
NF1-216ENST00000495910 OTOGQ6ZRI0 2925 aa2.2□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 70.7 ms