RNA–Protein interactions for RNA: ENST00000494185.1

LMNB1-207, Transcript of lamin B1, humanhuman

TSL 2

Gene LMNB1, Length 579 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-207ENST00000494185 KRTAP19-3Q7Z4W3 81 aa0.48□□□□□ -2.33
LMNB1-207ENST00000494185 CRYBG3Q68DQ2 2970 aa0.48□□□□□ -2.33
LMNB1-207ENST00000494185 DCHS2Q6V1P9 2916 aa0.48□□□□□ -2.33
LMNB1-207ENST00000494185 AKAP9Q99996 3911 aa0.47□□□□□ -2.33
LMNB1-207ENST00000494185 TTC28Q96AY4 2481 aa0.47□□□□□ -2.33
LMNB1-207ENST00000494185 GPR98Q8WXG9 6306 aa0.47□□□□□ -2.33
LMNB1-207ENST00000494185 SPTA1P02549 2419 aa0.47□□□□□ -2.33
LMNB1-207ENST00000494185 AKAP6Q13023 2319 aa0.47□□□□□ -2.33
LMNB1-207ENST00000494185 TNRC18O15417 2968 aaPredicted RBP0.47□□□□□ -2.33
LMNB1-207ENST00000494185 APOBP04114 4563 aaKnown RBP0.47□□□□□ -2.33
LMNB1-207ENST00000494185 FBN2P35556 2912 aa0.47□□□□□ -2.33
LMNB1-207ENST00000494185 CHD8Q9HCK8 2581 aa0.47□□□□□ -2.33
LMNB1-207ENST00000494185 DEFB109BQ30KR1 87 aa0.47□□□□□ -2.33
LMNB1-207ENST00000494185 TMEM167AQ8TBQ9 72 aa0.47□□□□□ -2.33
LMNB1-207ENST00000494185 TOMM7Q9P0U1 55 aa0.47□□□□□ -2.33
LMNB1-207ENST00000494185 TENM4Q6N022 2769 aa0.47□□□□□ -2.33
LMNB1-207ENST00000494185 NCOR1O75376 2440 aa0.47□□□□□ -2.33
LMNB1-207ENST00000494185 DNAH3Q8TD57 4116 aa0.47□□□□□ -2.33
LMNB1-207ENST00000494185 USP24Q9UPU5 2620 aa0.47□□□□□ -2.33
LMNB1-207ENST00000494185 PDZD2O15018 2839 aa0.46□□□□□ -2.34
LMNB1-207ENST00000494185 DNAH17Q9UFH2 4485 aa0.46□□□□□ -2.34
LMNB1-207ENST00000494185 WNK1Q9H4A3 2382 aa0.46□□□□□ -2.34
LMNB1-207ENST00000494185 ACACAQ13085 2346 aa0.46□□□□□ -2.34
LMNB1-207ENST00000494185 SETD2Q9BYW2 2564 aaPredicted RBP0.46□□□□□ -2.34
LMNB1-207ENST00000494185 NF1P21359 2839 aa0.46□□□□□ -2.34
LMNB1-207ENST00000494185 DEFB108AA8MXU0 73 aa0.46□□□□□ -2.34
LMNB1-207ENST00000494185 H3BUA1 57 aa0.46□□□□□ -2.34
LMNB1-207ENST00000494185 SPINK1P00995 79 aa0.46□□□□□ -2.34
LMNB1-207ENST00000494185 RPL39P5Q59GN2 51 aa0.46□□□□□ -2.34
LMNB1-207ENST00000494185 DEFB106AQ8N104 65 aa0.46□□□□□ -2.34
LMNB1-207ENST00000494185 TENM2Q9NT68 2774 aa0.46□□□□□ -2.34
LMNB1-207ENST00000494185 SMG1Q96Q15 3661 aaKnown RBP0.46□□□□□ -2.34
LMNB1-207ENST00000494185 NOTCH1P46531 2555 aa0.46□□□□□ -2.34
LMNB1-207ENST00000494185 HECTD4Q9Y4D8 3996 aa0.46□□□□□ -2.34
LMNB1-207ENST00000494185 DNAH7Q8WXX0 4024 aa0.45□□□□□ -2.34
LMNB1-207ENST00000494185 PKD1P98161 4303 aa0.45□□□□□ -2.34
LMNB1-207ENST00000494185 EPG5Q9HCE0 2579 aa0.45□□□□□ -2.34
LMNB1-207ENST00000494185 FRAS1Q86XX4 4008 aa0.45□□□□□ -2.34
LMNB1-207ENST00000494185 CEP290O15078 2479 aa0.45□□□□□ -2.34
LMNB1-207ENST00000494185 DMDP11532 3685 aa0.45□□□□□ -2.34
LMNB1-207ENST00000494185 CEP250Q9BV73 2442 aa0.45□□□□□ -2.34
LMNB1-207ENST00000494185 UNC79Q9P2D8 2635 aa0.45□□□□□ -2.34
LMNB1-207ENST00000494185 FAT3Q8TDW7 4589 aa0.44□□□□□ -2.34
LMNB1-207ENST00000494185 NBEAL2Q6ZNJ1 2754 aa0.44□□□□□ -2.34
LMNB1-207ENST00000494185 DNAH6Q9C0G6 4158 aa0.44□□□□□ -2.34
LMNB1-207ENST00000494185 DNAH1Q9P2D7 4330 aa0.44□□□□□ -2.34
LMNB1-207ENST00000494185 RIF1Q5UIP0 2472 aaKnown RBP0.44□□□□□ -2.34
LMNB1-207ENST00000494185 CCDC168Q8NDH2 2452 aa0.44□□□□□ -2.34
LMNB1-207ENST00000494185 CUBNO60494 3623 aa0.44□□□□□ -2.34
LMNB1-207ENST00000494185 CFAP54Q96N23 3096 aa0.44□□□□□ -2.34
LMNB1-207ENST00000494185 FLNCQ14315 2725 aa0.44□□□□□ -2.34
LMNB1-207ENST00000494185 LAMA5O15230 3695 aa0.43□□□□□ -2.34
LMNB1-207ENST00000494185 IGSF10Q6WRI0 2623 aa0.43□□□□□ -2.34
LMNB1-207ENST00000494185 DNAH12Q6ZR08 3092 aa0.43□□□□□ -2.34
LMNB1-207ENST00000494185 COL12A1Q99715 3063 aa0.43□□□□□ -2.34
LMNB1-207ENST00000494185 MKI67P46013 3256 aaKnown RBP0.43□□□□□ -2.34
LMNB1-207ENST00000494185 MAP1BP46821 2468 aaKnown RBP0.43□□□□□ -2.34
LMNB1-207ENST00000494185 RELNP78509 3460 aa0.43□□□□□ -2.34
LMNB1-207ENST00000494185 ZFYVE26Q68DK2 2539 aa0.42□□□□□ -2.34
LMNB1-207ENST00000494185 PLECQ15149 4684 aaKnown RBP0.42□□□□□ -2.34
LMNB1-207ENST00000494185 TNXBP22105 4242 aa0.42□□□□□ -2.34
LMNB1-207ENST00000494185 CMYA5Q8N3K9 4069 aa0.42□□□□□ -2.34
LMNB1-207ENST00000494185 KRTAP2-3P0C7H8 128 aa0.42□□□□□ -2.34
LMNB1-207ENST00000494185 DEFB1P60022 68 aa0.42□□□□□ -2.34
LMNB1-207ENST00000494185 KRTAP2-4Q9BYR9 128 aa0.42□□□□□ -2.34
LMNB1-207ENST00000494185 KRTAP2-1Q9BYU5 128 aa0.42□□□□□ -2.34
LMNB1-207ENST00000494185 ATMQ13315 3056 aa0.42□□□□□ -2.34
LMNB1-207ENST00000494185 TACC2O95359 2948 aa0.42□□□□□ -2.34
LMNB1-207ENST00000494185 COL6A5A8TX70 2615 aa0.42□□□□□ -2.34
LMNB1-207ENST00000494185 FRYQ5TBA9 3013 aa0.42□□□□□ -2.34
LMNB1-207ENST00000494185 APC2O95996 2303 aa0.42□□□□□ -2.34
LMNB1-207ENST00000494185 SETXQ7Z333 2677 aaKnown RBP0.41□□□□□ -2.34
LMNB1-207ENST00000494185 UTP20O75691 2785 aaKnown RBP0.41□□□□□ -2.34
LMNB1-207ENST00000494185 DMXL1Q9Y485 3027 aa0.41□□□□□ -2.34
LMNB1-207ENST00000494185 USP9YO00507 2555 aaPredicted RBP0.41□□□□□ -2.34
LMNB1-207ENST00000494185 SPTBN4Q9H254 2564 aa0.41□□□□□ -2.34
LMNB1-207ENST00000494185 SMR3AQ99954 134 aa0.41□□□□□ -2.34
LMNB1-207ENST00000494185 TENM3Q9P273 2699 aa0.41□□□□□ -2.34
LMNB1-207ENST00000494185 MUC17Q685J3 4493 aa0.41□□□□□ -2.34
LMNB1-207ENST00000494185 HIVEP1P15822 2718 aa0.41□□□□□ -2.34
LMNB1-207ENST00000494185 PTPN13Q12923 2485 aa0.41□□□□□ -2.34
LMNB1-207ENST00000494185 SZT2Q5T011 3432 aa0.41□□□□□ -2.34
LMNB1-207ENST00000494185 SYNE1Q8NF91 8797 aaKnown RBP0.41□□□□□ -2.34
LMNB1-207ENST00000494185 DNAH5Q8TE73 4624 aa0.41□□□□□ -2.34
LMNB1-207ENST00000494185 ITPR3Q14573 2671 aa0.41□□□□□ -2.34
LMNB1-207ENST00000494185 ITPR1Q14643 2758 aa0.4□□□□□ -2.34
LMNB1-207ENST00000494185 PKHD1P08F94 4074 aa0.4□□□□□ -2.34
LMNB1-207ENST00000494185 FLGP20930 4061 aaPredicted RBP0.4□□□□□ -2.34
LMNB1-207ENST00000494185 SVEP1Q4LDE5 3571 aa0.4□□□□□ -2.34
LMNB1-207ENST00000494185 PKD1L1Q8TDX9 2849 aa0.4□□□□□ -2.35
LMNB1-207ENST00000494185 LRP1Q07954 4544 aaKnown RBP0.4□□□□□ -2.35
LMNB1-207ENST00000494185 APELAP0DMC3 54 aa0.4□□□□□ -2.35
LMNB1-207ENST00000494185 SPINK6Q6UWN8 80 aa0.4□□□□□ -2.35
LMNB1-207ENST00000494185 NOP10Q9NPE3 64 aaKnown RBP0.4□□□□□ -2.35
LMNB1-207ENST00000494185 DYNC1H1Q14204 4646 aaKnown RBP0.4□□□□□ -2.35
LMNB1-207ENST00000494185 CSMD1Q96PZ7 3565 aa0.4□□□□□ -2.35
LMNB1-207ENST00000494185 ZZEF1O43149 2961 aa0.4□□□□□ -2.35
LMNB1-207ENST00000494185 KALRNO60229 2985 aa0.4□□□□□ -2.35
LMNB1-207ENST00000494185 C5orf42Q9H799 3197 aa0.4□□□□□ -2.35
LMNB1-207ENST00000494185 LPAP08519 4548 aa0.4□□□□□ -2.35
Retrieved 100 of 20,778 RNA–protein pairs in 79.8 ms