RNA–Protein interactions for RNA: ENST00000493271.1

SNRNP200-207, Transcript of small nuclear ribonucleoprotein U5 subunit 200, humanhuman

TSL 3

Gene SNRNP200, Length 585 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP200-207ENST00000493271 FAM240AA0A1B0GVK7 77 aa5.67□□□□□ -1.5
SNRNP200-207ENST00000493271 GHRHP01286 108 aa5.67□□□□□ -1.5
SNRNP200-207ENST00000493271 Q6JHZ5 121 aa5.67□□□□□ -1.5
SNRNP200-207ENST00000493271 LINC00575Q6W349 94 aa5.66□□□□□ -1.5
SNRNP200-207ENST00000493271 OBSCN-AS1Q96MR7 158 aa5.66□□□□□ -1.5
SNRNP200-207ENST00000493271 TRBV7-7A0A0K0K1E9 115 aa5.65□□□□□ -1.5
SNRNP200-207ENST00000493271 hADV29S1A0JD25 119 aa5.65□□□□□ -1.5
SNRNP200-207ENST00000493271 TMEM256-PLSCR3K7ERE1 68 aa5.64□□□□□ -1.51
SNRNP200-207ENST00000493271 ACYP1P07311 99 aa5.64□□□□□ -1.51
SNRNP200-207ENST00000493271 FCGBPQ9Y6R7 5405 aaPredicted RBP5.63□□□□□ -1.51
SNRNP200-207ENST00000493271 JMJD7-PLA2G4BH0Y9G9 81 aa5.63□□□□□ -1.51
SNRNP200-207ENST00000493271 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP5.63□□□□□ -1.51
SNRNP200-207ENST00000493271 SIGMAR1Q99720 223 aa5.63□□□□□ -1.51
SNRNP200-207ENST00000493271 LCE3BQ5TA77 95 aa5.61□□□□□ -1.51
SNRNP200-207ENST00000493271 C20orf166-AS1Q96NR2 134 aa5.61□□□□□ -1.51
SNRNP200-207ENST00000493271 C21orf62-AS1Q17RA5 79 aa5.6□□□□□ -1.51
SNRNP200-207ENST00000493271 IGFL1Q6UW32 110 aa5.6□□□□□ -1.51
SNRNP200-207ENST00000493271 Q6ZQY7 126 aa5.6□□□□□ -1.51
SNRNP200-207ENST00000493271 Q96NJ1 140 aa5.6□□□□□ -1.51
SNRNP200-207ENST00000493271 SCGB1A1P11684 91 aa5.59□□□□□ -1.51
SNRNP200-207ENST00000493271 KRTAP4-12Q9BQ66 201 aa5.59□□□□□ -1.51
SNRNP200-207ENST00000493271 KRTAP9-9Q9BYP9 154 aa5.59□□□□□ -1.51
SNRNP200-207ENST00000493271 KRTAP9-4Q9BYQ2 154 aa5.59□□□□□ -1.51
SNRNP200-207ENST00000493271 SS18L2Q9UHA2 77 aa5.59□□□□□ -1.51
SNRNP200-207ENST00000493271 C14orf132Q9NPU4 83 aa5.58□□□□□ -1.52
SNRNP200-207ENST00000493271 LINC00846Q9NV44 126 aa5.58□□□□□ -1.52
SNRNP200-207ENST00000493271 A8MUU9 505 aa5.57□□□□□ -1.52
SNRNP200-207ENST00000493271 PDE6GP18545 87 aa5.57□□□□□ -1.52
SNRNP200-207ENST00000493271 KRTAP19-1Q8IUB9 90 aa5.57□□□□□ -1.52
SNRNP200-207ENST00000493271 MT2AP02795 61 aa5.56□□□□□ -1.52
SNRNP200-207ENST00000493271 MT-ATP8P03928 68 aa5.55□□□□□ -1.52
SNRNP200-207ENST00000493271 RBM3P98179 157 aaKnown RBP5.55□□□□□ -1.52
SNRNP200-207ENST00000493271 LOC110117498A0A087WWA1 95 aa5.54□□□□□ -1.52
SNRNP200-207ENST00000493271 CCKP06307 115 aa5.54□□□□□ -1.52
SNRNP200-207ENST00000493271 PCP4P48539 62 aa5.54□□□□□ -1.52
SNRNP200-207ENST00000493271 LINC00643Q86TS7 51 aa5.54□□□□□ -1.52
SNRNP200-207ENST00000493271 FAM236DA0A1B0GTK5 79 aa5.53□□□□□ -1.52
SNRNP200-207ENST00000493271 FAM236CP0DP71 79 aa5.53□□□□□ -1.52
SNRNP200-207ENST00000493271 DSCR8Q96T75 97 aa5.53□□□□□ -1.52
SNRNP200-207ENST00000493271 MACF1Q9UPN3 7388 aaKnown RBP5.53□□□□□ -1.52
SNRNP200-207ENST00000493271 KRTAP4-8A0A0G2JLE6 195 aa5.52□□□□□ -1.53
SNRNP200-207ENST00000493271 A0A1B0GV72 72 aa5.52□□□□□ -1.53
SNRNP200-207ENST00000493271 NDUFV3P56181 108 aaKnown RBP5.52□□□□□ -1.53
SNRNP200-207ENST00000493271 KRTAP9-3Q9BYQ3 159 aa5.52□□□□□ -1.53
SNRNP200-207ENST00000493271 MT1FP04733 61 aa5.51□□□□□ -1.53
SNRNP200-207ENST00000493271 KRTAP10-10P60014 251 aa5.51□□□□□ -1.53
SNRNP200-207ENST00000493271 Q6ZQT0 140 aa5.51□□□□□ -1.53
SNRNP200-207ENST00000493271 IMUPQ9GZP8 106 aa5.51□□□□□ -1.53
SNRNP200-207ENST00000493271 RBM12B-AS1Q9P1G2 102 aa5.51□□□□□ -1.53
SNRNP200-207ENST00000493271 ATP5EP2Q5VTU8 51 aa5.5□□□□□ -1.53
SNRNP200-207ENST00000493271 TRBV7-4A0A0J9YYF1 115 aa5.49□□□□□ -1.53
SNRNP200-207ENST00000493271 UBL5Q9BZL1 73 aa5.48□□□□□ -1.53
SNRNP200-207ENST00000493271 MPLKIPQ8TAP9 179 aa5.47□□□□□ -1.53
SNRNP200-207ENST00000493271 SYNE2Q8WXH0 6885 aaKnown RBP5.46□□□□□ -1.54
SNRNP200-207ENST00000493271 A0A1B0GW54 56 aa5.45□□□□□ -1.54
SNRNP200-207ENST00000493271 A0A087WSZ3 146 aa5.44□□□□□ -1.54
SNRNP200-207ENST00000493271 KRTAP19-6Q3LI70 58 aa5.44□□□□□ -1.54
SNRNP200-207ENST00000493271 HRES1P13985 223 aa5.43□□□□□ -1.54
SNRNP200-207ENST00000493271 DSCR10P59022 87 aa5.43□□□□□ -1.54
SNRNP200-207ENST00000493271 LINC00313P59037 77 aa5.43□□□□□ -1.54
SNRNP200-207ENST00000493271 KRTAP16-1A8MUX0 517 aa5.41□□□□□ -1.54
SNRNP200-207ENST00000493271 Q6ZVQ6 151 aa5.41□□□□□ -1.54
SNRNP200-207ENST00000493271 IGKV3D-7A0A0C4DH55 119 aa5.4□□□□□ -1.54
SNRNP200-207ENST00000493271 ANAPC13Q9BS18 74 aa5.4□□□□□ -1.54
SNRNP200-207ENST00000493271 FAM236AA0A1B0GUQ0 79 aa5.39□□□□□ -1.55
SNRNP200-207ENST00000493271 FAM236BA0A1B0GV22 79 aa5.39□□□□□ -1.55
SNRNP200-207ENST00000493271 CXCL6P80162 114 aa5.39□□□□□ -1.55
SNRNP200-207ENST00000493271 NOTCH2NLQ7Z3S9 236 aa5.38□□□□□ -1.55
SNRNP200-207ENST00000493271 KRTAP6-3Q3LI67 103 aa5.37□□□□□ -1.55
SNRNP200-207ENST00000493271 ATOX1O00244 68 aa5.36□□□□□ -1.55
SNRNP200-207ENST00000493271 IGKV4-1P06312 121 aa5.36□□□□□ -1.55
SNRNP200-207ENST00000493271 HIST1H4AP62805 103 aaKnown RBP5.36□□□□□ -1.55
SNRNP200-207ENST00000493271 NREPQ16612 68 aa5.36□□□□□ -1.55
SNRNP200-207ENST00000493271 SVIPQ8NHG7 77 aa5.36□□□□□ -1.55
SNRNP200-207ENST00000493271 A0A1W2PNM2 257 aa5.35□□□□□ -1.55
SNRNP200-207ENST00000493271 A8MWP4 228 aa5.35□□□□□ -1.55
SNRNP200-207ENST00000493271 KRTAP4-7Q9BYR0 210 aa5.35□□□□□ -1.55
SNRNP200-207ENST00000493271 BPY2O14599 106 aa5.32□□□□□ -1.56
SNRNP200-207ENST00000493271 A0A087WVE0 104 aa5.31□□□□□ -1.56
SNRNP200-207ENST00000493271 C8orf87E5RJ46 101 aa5.31□□□□□ -1.56
SNRNP200-207ENST00000493271 IGHV6-1A0A0B4J1U7 121 aa5.3□□□□□ -1.56
SNRNP200-207ENST00000493271 SMIM20Q8N5G0 67 aa5.29□□□□□ -1.56
SNRNP200-207ENST00000493271 LINC00472Q9H8W2 130 aa5.29□□□□□ -1.56
SNRNP200-207ENST00000493271 UQCRQO14949 82 aa5.28□□□□□ -1.56
SNRNP200-207ENST00000493271 SPINK7P58062 85 aa5.28□□□□□ -1.56
SNRNP200-207ENST00000493271 ZCCHC13Q8WW36 166 aaKnown RBP5.28□□□□□ -1.56
SNRNP200-207ENST00000493271 COX7CP15954 63 aa5.27□□□□□ -1.57
SNRNP200-207ENST00000493271 SERP2Q8N6R1 65 aa5.27□□□□□ -1.57
SNRNP200-207ENST00000493271 LCE1DQ5T752 114 aa5.26□□□□□ -1.57
SNRNP200-207ENST00000493271 A0A1B0GVX0 72 aa5.25□□□□□ -1.57
SNRNP200-207ENST00000493271 DEFB116Q30KQ4 102 aa5.25□□□□□ -1.57
SNRNP200-207ENST00000493271 CCDC179H3BU77 68 aa5.24□□□□□ -1.57
SNRNP200-207ENST00000493271 Q8N9P0 234 aaPredicted RBP5.24□□□□□ -1.57
SNRNP200-207ENST00000493271 TRAV7A0A075B6U4 112 aa5.23□□□□□ -1.57
SNRNP200-207ENST00000493271 J3KT08 172 aa5.23□□□□□ -1.57
SNRNP200-207ENST00000493271 WFDC13Q8IUB5 93 aa5.22□□□□□ -1.57
SNRNP200-207ENST00000493271 Q8N9L7 120 aa5.22□□□□□ -1.57
SNRNP200-207ENST00000493271 K7EQZ3 153 aa5.2□□□□□ -1.58
SNRNP200-207ENST00000493271 HCG22E2RYF7 251 aa5.18□□□□□ -1.58
SNRNP200-207ENST00000493271 NDUFB1O75438 58 aa5.17□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 97.7 ms