RNA–Protein interactions for RNA: ENST00000488971.1

KDM3A-213, Transcript of lysine demethylase 3A, humanhuman

TSL 3

Gene KDM3A, Length 975 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM3A-213ENST00000488971 M0R2T5 61 aa0.91□□□□□ -2.26
KDM3A-213ENST00000488971 PIEZO1Q92508 2521 aa0.9□□□□□ -2.26
KDM3A-213ENST00000488971 BSNQ9UPA5 3926 aa0.9□□□□□ -2.26
KDM3A-213ENST00000488971 FRAS1Q86XX4 4008 aa0.9□□□□□ -2.26
KDM3A-213ENST00000488971 PRKDCP78527 4128 aaKnown RBP0.9□□□□□ -2.26
KDM3A-213ENST00000488971 CRYBG3Q68DQ2 2970 aa0.9□□□□□ -2.27
KDM3A-213ENST00000488971 BDP1A6H8Y1 2624 aa0.9□□□□□ -2.27
KDM3A-213ENST00000488971 PKD1L2Q7Z442 2459 aa0.9□□□□□ -2.27
KDM3A-213ENST00000488971 TENM4Q6N022 2769 aa0.89□□□□□ -2.27
KDM3A-213ENST00000488971 NOTCH1P46531 2555 aa0.89□□□□□ -2.27
KDM3A-213ENST00000488971 SPTBN4Q9H254 2564 aa0.89□□□□□ -2.27
KDM3A-213ENST00000488971 SPART-AS1P0CW21 52 aa0.89□□□□□ -2.27
KDM3A-213ENST00000488971 SMR3AQ99954 134 aa0.89□□□□□ -2.27
KDM3A-213ENST00000488971 FRYLO94915 3013 aa0.89□□□□□ -2.27
KDM3A-213ENST00000488971 VWFP04275 2813 aa0.88□□□□□ -2.27
KDM3A-213ENST00000488971 CACNA1AO00555 2505 aa0.88□□□□□ -2.27
KDM3A-213ENST00000488971 PRUNE2Q8WUY3 3088 aa0.88□□□□□ -2.27
KDM3A-213ENST00000488971 ACACAQ13085 2346 aa0.88□□□□□ -2.27
KDM3A-213ENST00000488971 HTN3P15516 51 aa0.88□□□□□ -2.27
KDM3A-213ENST00000488971 BOD1L1Q8NFC6 3051 aa0.88□□□□□ -2.27
KDM3A-213ENST00000488971 ATRQ13535 2644 aa0.87□□□□□ -2.27
KDM3A-213ENST00000488971 CENPFP49454 3210 aa0.87□□□□□ -2.27
KDM3A-213ENST00000488971 SPTA1P02549 2419 aa0.87□□□□□ -2.27
KDM3A-213ENST00000488971 VPS13AQ96RL7 3174 aa0.87□□□□□ -2.27
KDM3A-213ENST00000488971 CEP290O15078 2479 aa0.87□□□□□ -2.27
KDM3A-213ENST00000488971 RANBP2P49792 3224 aaKnown RBP0.87□□□□□ -2.27
KDM3A-213ENST00000488971 CFAP47Q6ZTR5 3102 aa0.87□□□□□ -2.27
KDM3A-213ENST00000488971 GOLGB1Q14789 3259 aaKnown RBP0.87□□□□□ -2.27
KDM3A-213ENST00000488971 WDFY4Q6ZS81 3184 aa0.87□□□□□ -2.27
KDM3A-213ENST00000488971 APCP25054 2843 aa0.87□□□□□ -2.27
KDM3A-213ENST00000488971 AKAP13Q12802 2813 aa0.86□□□□□ -2.27
KDM3A-213ENST00000488971 CELSR1Q9NYQ6 3014 aa0.86□□□□□ -2.27
KDM3A-213ENST00000488971 PRRC2CQ9Y520 2896 aaKnown RBP0.86□□□□□ -2.27
KDM3A-213ENST00000488971 MAP1AP78559 2803 aaPredicted RBP0.85□□□□□ -2.27
KDM3A-213ENST00000488971 FAT2Q9NYQ8 4349 aa0.85□□□□□ -2.27
KDM3A-213ENST00000488971 DEFB4AO15263 64 aa0.85□□□□□ -2.27
KDM3A-213ENST00000488971 TRIOO75962 3097 aa0.85□□□□□ -2.27
KDM3A-213ENST00000488971 MAP1BP46821 2468 aaKnown RBP0.84□□□□□ -2.27
KDM3A-213ENST00000488971 UBR5O95071 2799 aaPredicted RBP0.84□□□□□ -2.27
KDM3A-213ENST00000488971 SRRM2Q9UQ35 2752 aaKnown RBP0.84□□□□□ -2.27
KDM3A-213ENST00000488971 HECTD1Q9ULT8 2610 aa0.84□□□□□ -2.27
KDM3A-213ENST00000488971 KRTAP19-3Q7Z4W3 81 aa0.84□□□□□ -2.27
KDM3A-213ENST00000488971 LYSTQ99698 3801 aa0.84□□□□□ -2.27
KDM3A-213ENST00000488971 MKI67P46013 3256 aaKnown RBP0.84□□□□□ -2.28
KDM3A-213ENST00000488971 VPS13DQ5THJ4 4388 aa0.84□□□□□ -2.28
KDM3A-213ENST00000488971 UTRNP46939 3433 aa0.83□□□□□ -2.28
KDM3A-213ENST00000488971 MYCBP2O75592 4640 aa0.83□□□□□ -2.28
KDM3A-213ENST00000488971 ITPR1Q14643 2758 aa0.83□□□□□ -2.28
KDM3A-213ENST00000488971 USP24Q9UPU5 2620 aa0.83□□□□□ -2.28
KDM3A-213ENST00000488971 TNP1P09430 55 aa0.83□□□□□ -2.28
KDM3A-213ENST00000488971 KRTAP2-3P0C7H8 128 aa0.83□□□□□ -2.28
KDM3A-213ENST00000488971 KRTAP2-4Q9BYR9 128 aa0.83□□□□□ -2.28
KDM3A-213ENST00000488971 KRTAP2-1Q9BYU5 128 aa0.83□□□□□ -2.28
KDM3A-213ENST00000488971 PCNTO95613 3336 aa0.83□□□□□ -2.28
KDM3A-213ENST00000488971 VPS13BQ7Z7G8 4022 aa0.83□□□□□ -2.28
KDM3A-213ENST00000488971 SZT2Q5T011 3432 aa0.83□□□□□ -2.28
KDM3A-213ENST00000488971 COL6A5A8TX70 2615 aa0.83□□□□□ -2.28
KDM3A-213ENST00000488971 CEP250Q9BV73 2442 aa0.83□□□□□ -2.28
KDM3A-213ENST00000488971 C5orf42Q9H799 3197 aa0.82□□□□□ -2.28
KDM3A-213ENST00000488971 KALRNO60229 2985 aa0.82□□□□□ -2.28
KDM3A-213ENST00000488971 NCOR1O75376 2440 aa0.82□□□□□ -2.28
KDM3A-213ENST00000488971 TNXBP22105 4242 aa0.82□□□□□ -2.28
KDM3A-213ENST00000488971 NF1P21359 2839 aa0.82□□□□□ -2.28
KDM3A-213ENST00000488971 COL12A1Q99715 3063 aa0.82□□□□□ -2.28
KDM3A-213ENST00000488971 HTTP42858 3142 aa0.82□□□□□ -2.28
KDM3A-213ENST00000488971 LRBAP50851 2863 aa0.82□□□□□ -2.28
KDM3A-213ENST00000488971 DMXL1Q9Y485 3027 aa0.81□□□□□ -2.28
KDM3A-213ENST00000488971 EP300Q09472 2414 aaPredicted RBP0.81□□□□□ -2.28
KDM3A-213ENST00000488971 DCHS1Q96JQ0 3298 aa0.81□□□□□ -2.28
KDM3A-213ENST00000488971 DNAH12Q6ZR08 3092 aa0.8□□□□□ -2.28
KDM3A-213ENST00000488971 CCDC168Q8NDH2 2452 aa0.8□□□□□ -2.28
KDM3A-213ENST00000488971 FRYQ5TBA9 3013 aa0.8□□□□□ -2.28
KDM3A-213ENST00000488971 RPS29P62273 56 aaKnown RBP0.8□□□□□ -2.28
KDM3A-213ENST00000488971 KRTAP5-10Q6L8G5 202 aa0.8□□□□□ -2.28
KDM3A-213ENST00000488971 CREBBPQ92793 2442 aa0.8□□□□□ -2.28
KDM3A-213ENST00000488971 ZFHX4Q86UP3 3567 aa0.8□□□□□ -2.28
KDM3A-213ENST00000488971 APC2O95996 2303 aa0.8□□□□□ -2.28
KDM3A-213ENST00000488971 NIPBLQ6KC79 2804 aaeCLIP0.79□□□□□ -2.28
KDM3A-213ENST00000488971 SPEGQ15772 3267 aa0.79□□□□□ -2.28
KDM3A-213ENST00000488971 MUC16Q8WXI7 14507 aa0.79□□□□□ -2.28
KDM3A-213ENST00000488971 DNAH11Q96DT5 4516 aa0.79□□□□□ -2.28
KDM3A-213ENST00000488971 LAMA2P24043 3122 aaKnown RBP0.79□□□□□ -2.28
KDM3A-213ENST00000488971 C9orf92A6NGG3 77 aa0.79□□□□□ -2.28
KDM3A-213ENST00000488971 COL7A1Q02388 2944 aa0.79□□□□□ -2.28
KDM3A-213ENST00000488971 ITPR3Q14573 2671 aa0.79□□□□□ -2.28
KDM3A-213ENST00000488971 UNC80Q8N2C7 3258 aa0.78□□□□□ -2.28
KDM3A-213ENST00000488971 HUWE1Q7Z6Z7 4374 aaKnown RBP0.78□□□□□ -2.28
KDM3A-213ENST00000488971 PRM1P04553 51 aa0.78□□□□□ -2.28
KDM3A-213ENST00000488971 CHD8Q9HCK8 2581 aa0.78□□□□□ -2.28
KDM3A-213ENST00000488971 PDZD2O15018 2839 aa0.78□□□□□ -2.29
KDM3A-213ENST00000488971 DMXL2Q8TDJ6 3036 aa0.78□□□□□ -2.29
KDM3A-213ENST00000488971 ATMQ13315 3056 aa0.78□□□□□ -2.29
KDM3A-213ENST00000488971 RELNP78509 3460 aa0.77□□□□□ -2.29
KDM3A-213ENST00000488971 AKAP9Q99996 3911 aa0.77□□□□□ -2.29
KDM3A-213ENST00000488971 NCOR2Q9Y618 2525 aa0.77□□□□□ -2.29
KDM3A-213ENST00000488971 CELSR3Q9NYQ7 3312 aa0.77□□□□□ -2.29
KDM3A-213ENST00000488971 DMDP11532 3685 aa0.77□□□□□ -2.29
KDM3A-213ENST00000488971 HIVEP3Q5T1R4 2406 aa0.77□□□□□ -2.29
KDM3A-213ENST00000488971 ANKHD1Q8IWZ3 2542 aaKnown RBP0.77□□□□□ -2.29
KDM3A-213ENST00000488971 DCHS2Q6V1P9 2916 aa0.77□□□□□ -2.29
Retrieved 100 of 20,778 RNA–protein pairs in 128.6 ms