RNA–Protein interactions for RNA: ENST00000488087.1

ECHDC1-217, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 3

Gene ECHDC1, Length 473 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-217ENST00000488087 OTOGQ6ZRI0 2925 aa1.71□□□□□ -2.14
ECHDC1-217ENST00000488087 CELSR2Q9HCU4 2923 aa1.71□□□□□ -2.14
ECHDC1-217ENST00000488087 ZDBF2Q9HCK1 2354 aa1.71□□□□□ -2.14
ECHDC1-217ENST00000488087 EYSQ5T1H1 3165 aa1.7□□□□□ -2.14
ECHDC1-217ENST00000488087 NBDYA0A0U1RRE5 68 aa1.7□□□□□ -2.14
ECHDC1-217ENST00000488087 SSBP3-AS1Q7Z2R9 100 aa1.7□□□□□ -2.14
ECHDC1-217ENST00000488087 ITPR1Q14643 2758 aa1.7□□□□□ -2.14
ECHDC1-217ENST00000488087 ACACAQ13085 2346 aa1.69□□□□□ -2.14
ECHDC1-217ENST00000488087 LRBAP50851 2863 aa1.69□□□□□ -2.14
ECHDC1-217ENST00000488087 LOC400499M0QZD8 3231 aa1.69□□□□□ -2.14
ECHDC1-217ENST00000488087 A0A096LNI7 61 aa1.69□□□□□ -2.14
ECHDC1-217ENST00000488087 TPRXLQ17RH7 258 aa1.69□□□□□ -2.14
ECHDC1-217ENST00000488087 DEFB135Q30KP9 77 aa1.69□□□□□ -2.14
ECHDC1-217ENST00000488087 ANK3Q12955 4377 aaKnown RBP1.68□□□□□ -2.14
ECHDC1-217ENST00000488087 ASH1LQ9NR48 2969 aaKnown RBP1.68□□□□□ -2.14
ECHDC1-217ENST00000488087 ASPMQ8IZT6 3477 aa1.68□□□□□ -2.14
ECHDC1-217ENST00000488087 COL12A1Q99715 3063 aa1.68□□□□□ -2.14
ECHDC1-217ENST00000488087 ANKRD17O75179 2603 aaKnown RBP1.68□□□□□ -2.14
ECHDC1-217ENST00000488087 HTN3P15516 51 aa1.68□□□□□ -2.14
ECHDC1-217ENST00000488087 PRO2289Q9P1D8 64 aa1.68□□□□□ -2.14
ECHDC1-217ENST00000488087 ATMQ13315 3056 aa1.68□□□□□ -2.14
ECHDC1-217ENST00000488087 SPTAN1Q13813 2472 aaKnown RBP1.67□□□□□ -2.14
ECHDC1-217ENST00000488087 DMXL1Q9Y485 3027 aa1.67□□□□□ -2.14
ECHDC1-217ENST00000488087 DEFB4AO15263 64 aa1.67□□□□□ -2.14
ECHDC1-217ENST00000488087 RPL37P61927 97 aaKnown RBP1.67□□□□□ -2.14
ECHDC1-217ENST00000488087 KRTAP6-3Q3LI67 103 aa1.67□□□□□ -2.14
ECHDC1-217ENST00000488087 SVEP1Q4LDE5 3571 aa1.67□□□□□ -2.14
ECHDC1-217ENST00000488087 LAMA5O15230 3695 aa1.67□□□□□ -2.14
ECHDC1-217ENST00000488087 OTOGLQ3ZCN5 2332 aa1.67□□□□□ -2.14
ECHDC1-217ENST00000488087 SPTA1P02549 2419 aa1.67□□□□□ -2.14
ECHDC1-217ENST00000488087 SETXQ7Z333 2677 aaKnown RBP1.66□□□□□ -2.14
ECHDC1-217ENST00000488087 RELNP78509 3460 aa1.66□□□□□ -2.14
ECHDC1-217ENST00000488087 NCOR2Q9Y618 2525 aa1.66□□□□□ -2.14
ECHDC1-217ENST00000488087 HIVEP3Q5T1R4 2406 aa1.66□□□□□ -2.14
ECHDC1-217ENST00000488087 CSPG4Q6UVK1 2322 aa1.66□□□□□ -2.14
ECHDC1-217ENST00000488087 VPS13DQ5THJ4 4388 aa1.65□□□□□ -2.14
ECHDC1-217ENST00000488087 KRTAP12-4P60329 112 aa1.65□□□□□ -2.15
ECHDC1-217ENST00000488087 SPACA4Q8TDM5 124 aa1.65□□□□□ -2.15
ECHDC1-217ENST00000488087 CRIPTQ9P021 101 aa1.65□□□□□ -2.15
ECHDC1-217ENST00000488087 VPS13CQ709C8 3753 aa1.65□□□□□ -2.15
ECHDC1-217ENST00000488087 ANKRD11Q6UB99 2663 aaPredicted RBP1.64□□□□□ -2.15
ECHDC1-217ENST00000488087 NBASA2RRP1 2371 aa1.64□□□□□ -2.15
ECHDC1-217ENST00000488087 UTP20O75691 2785 aaKnown RBP1.64□□□□□ -2.15
ECHDC1-217ENST00000488087 SPTBN4Q9H254 2564 aa1.63□□□□□ -2.15
ECHDC1-217ENST00000488087 NF1P21359 2839 aa1.63□□□□□ -2.15
ECHDC1-217ENST00000488087 APCP25054 2843 aa1.63□□□□□ -2.15
ECHDC1-217ENST00000488087 DNAH8Q96JB1 4490 aa1.63□□□□□ -2.15
ECHDC1-217ENST00000488087 PTPN13Q12923 2485 aa1.62□□□□□ -2.15
ECHDC1-217ENST00000488087 TRRAPQ9Y4A5 3859 aa1.62□□□□□ -2.15
ECHDC1-217ENST00000488087 DNAH17Q9UFH2 4485 aa1.62□□□□□ -2.15
ECHDC1-217ENST00000488087 ZFHX2Q9C0A1 2572 aaPredicted RBP1.61□□□□□ -2.15
ECHDC1-217ENST00000488087 SPG11Q96JI7 2443 aa1.61□□□□□ -2.15
ECHDC1-217ENST00000488087 IGF2RP11717 2491 aa1.61□□□□□ -2.15
ECHDC1-217ENST00000488087 CRYBG3Q68DQ2 2970 aa1.61□□□□□ -2.15
ECHDC1-217ENST00000488087 MXRA5Q9NR99 2828 aa1.61□□□□□ -2.15
ECHDC1-217ENST00000488087 SPINK1P00995 79 aa1.61□□□□□ -2.15
ECHDC1-217ENST00000488087 SPINK6Q6UWN8 80 aa1.61□□□□□ -2.15
ECHDC1-217ENST00000488087 TLN2Q9Y4G6 2542 aa1.61□□□□□ -2.15
ECHDC1-217ENST00000488087 TLN1Q9Y490 2541 aaKnown RBP1.6□□□□□ -2.15
ECHDC1-217ENST00000488087 PLAC4Q8WY50 150 aa1.6□□□□□ -2.15
ECHDC1-217ENST00000488087 FBN1P35555 2871 aaKnown RBP1.59□□□□□ -2.15
ECHDC1-217ENST00000488087 RPS29P62273 56 aaKnown RBP1.59□□□□□ -2.15
ECHDC1-217ENST00000488087 DEFB123Q8N688 67 aa1.59□□□□□ -2.15
ECHDC1-217ENST00000488087 TEX15Q9BXT5 2789 aa1.59□□□□□ -2.15
ECHDC1-217ENST00000488087 GVINP1Q7Z2Y8 2422 aa1.59□□□□□ -2.16
ECHDC1-217ENST00000488087 DYNC2H1Q8NCM8 4307 aaKnown RBP1.59□□□□□ -2.16
ECHDC1-217ENST00000488087 DNAH10Q8IVF4 4471 aa1.58□□□□□ -2.16
ECHDC1-217ENST00000488087 FRAS1Q86XX4 4008 aa1.58□□□□□ -2.16
ECHDC1-217ENST00000488087 CEP295Q9C0D2 2601 aa1.58□□□□□ -2.16
ECHDC1-217ENST00000488087 RIF1Q5UIP0 2472 aaKnown RBP1.58□□□□□ -2.16
ECHDC1-217ENST00000488087 KRTAP21-2Q3LI59 83 aa1.58□□□□□ -2.16
ECHDC1-217ENST00000488087 C10orf95Q9H7T3 257 aa1.58□□□□□ -2.16
ECHDC1-217ENST00000488087 S4R3F8 94 aa1.58□□□□□ -2.16
ECHDC1-217ENST00000488087 JMJD1CQ15652 2540 aa1.58□□□□□ -2.16
ECHDC1-217ENST00000488087 ANK2Q01484 3957 aa1.57□□□□□ -2.16
ECHDC1-217ENST00000488087 FN1P02751 2386 aaKnown RBP1.57□□□□□ -2.16
ECHDC1-217ENST00000488087 Q6ZRN7 208 aaPredicted RBP1.57□□□□□ -2.16
ECHDC1-217ENST00000488087 NBEAL2Q6ZNJ1 2754 aa1.57□□□□□ -2.16
ECHDC1-217ENST00000488087 LYSTQ99698 3801 aa1.57□□□□□ -2.16
ECHDC1-217ENST00000488087 DNAH3Q8TD57 4116 aa1.56□□□□□ -2.16
ECHDC1-217ENST00000488087 GCN1Q92616 2671 aaKnown RBP1.56□□□□□ -2.16
ECHDC1-217ENST00000488087 MYO9AB2RTY4 2548 aa1.56□□□□□ -2.16
ECHDC1-217ENST00000488087 ZFYVE26Q68DK2 2539 aa1.56□□□□□ -2.16
ECHDC1-217ENST00000488087 NIPBLQ6KC79 2804 aaeCLIP1.56□□□□□ -2.16
ECHDC1-217ENST00000488087 DNAH2Q9P225 4427 aa1.56□□□□□ -2.16
ECHDC1-217ENST00000488087 DNAH9Q9NYC9 4486 aa1.56□□□□□ -2.16
ECHDC1-217ENST00000488087 ZNF292O60281 2723 aa1.55□□□□□ -2.16
ECHDC1-217ENST00000488087 TENM4Q6N022 2769 aa1.55□□□□□ -2.16
ECHDC1-217ENST00000488087 SRRM2Q9UQ35 2752 aaKnown RBP1.55□□□□□ -2.16
ECHDC1-217ENST00000488087 CSMD2Q7Z408 3487 aa1.55□□□□□ -2.16
ECHDC1-217ENST00000488087 J3QKU1 62 aa1.55□□□□□ -2.16
ECHDC1-217ENST00000488087 KRTAP13-4Q3LI77 160 aa1.55□□□□□ -2.16
ECHDC1-217ENST00000488087 PRKDCP78527 4128 aaKnown RBP1.55□□□□□ -2.16
ECHDC1-217ENST00000488087 MUC3AQ02505 3323 aa1.55□□□□□ -2.16
ECHDC1-217ENST00000488087 MYCBP2O75592 4640 aa1.54□□□□□ -2.16
ECHDC1-217ENST00000488087 UBR5O95071 2799 aaPredicted RBP1.54□□□□□ -2.16
ECHDC1-217ENST00000488087 DNAH11Q96DT5 4516 aa1.54□□□□□ -2.16
ECHDC1-217ENST00000488087 DOPEY1Q5JWR5 2465 aa1.54□□□□□ -2.16
ECHDC1-217ENST00000488087 INE1O15225 51 aa1.54□□□□□ -2.16
ECHDC1-217ENST00000488087 KRTAP12-1P59990 96 aa1.54□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms