RNA–Protein interactions for RNA: ENST00000487602.5

RBM28-206, Transcript of RNA binding motif protein 28, humanhuman

TSL 5

Gene RBM28, Length 715 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM28-206ENST00000487602 C1orf195Q5TG92 126 aa4.55□□□□□ -1.68
RBM28-206ENST00000487602 LINC00643Q86TS7 51 aa4.55□□□□□ -1.68
RBM28-206ENST00000487602 PCLOQ9Y6V0 5065 aa4.54□□□□□ -1.68
RBM28-206ENST00000487602 BPY2O14599 106 aa4.54□□□□□ -1.68
RBM28-206ENST00000487602 KRTAP19-1Q8IUB9 90 aa4.54□□□□□ -1.68
RBM28-206ENST00000487602 J3KT08 172 aa4.53□□□□□ -1.68
RBM28-206ENST00000487602 IGKV4-1P06312 121 aa4.53□□□□□ -1.68
RBM28-206ENST00000487602 SIGMAR1Q99720 223 aa4.53□□□□□ -1.68
RBM28-206ENST00000487602 IGKV3D-7A0A0C4DH55 119 aa4.52□□□□□ -1.69
RBM28-206ENST00000487602 CXCL6P80162 114 aa4.52□□□□□ -1.69
RBM28-206ENST00000487602 ATP5EP2Q5VTU8 51 aa4.52□□□□□ -1.69
RBM28-206ENST00000487602 DSCR10P59022 87 aa4.51□□□□□ -1.69
RBM28-206ENST00000487602 A8MWP4 228 aa4.5□□□□□ -1.69
RBM28-206ENST00000487602 RETNLBQ9BQ08 111 aa4.5□□□□□ -1.69
RBM28-206ENST00000487602 NDUFB1O75438 58 aa4.49□□□□□ -1.69
RBM28-206ENST00000487602 MT-ATP8P03928 68 aa4.49□□□□□ -1.69
RBM28-206ENST00000487602 FP248Q71RG6 208 aaPredicted RBP4.48□□□□□ -1.69
RBM28-206ENST00000487602 PRR15Q8IV56 129 aa4.48□□□□□ -1.69
RBM28-206ENST00000487602 A0A1B0GVX0 72 aa4.47□□□□□ -1.69
RBM28-206ENST00000487602 K7EQZ3 153 aa4.47□□□□□ -1.69
RBM28-206ENST00000487602 Q8N9L7 120 aa4.47□□□□□ -1.69
RBM28-206ENST00000487602 IGHV6-1A0A0B4J1U7 121 aa4.46□□□□□ -1.7
RBM28-206ENST00000487602 IMUPQ9GZP8 106 aa4.46□□□□□ -1.7
RBM28-206ENST00000487602 IGLV7-46A0A075B6I9 117 aa4.45□□□□□ -1.7
RBM28-206ENST00000487602 HIST1H4AP62805 103 aaKnown RBP4.45□□□□□ -1.7
RBM28-206ENST00000487602 C8orf87E5RJ46 101 aa4.44□□□□□ -1.7
RBM28-206ENST00000487602 PRR4Q16378 134 aa4.44□□□□□ -1.7
RBM28-206ENST00000487602 NOTCH2NLQ7Z3S9 236 aa4.44□□□□□ -1.7
RBM28-206ENST00000487602 C8orf17Q9NRJ1 99 aa4.44□□□□□ -1.7
RBM28-206ENST00000487602 A0A087WVE0 104 aa4.43□□□□□ -1.7
RBM28-206ENST00000487602 LINC00313P59037 77 aa4.43□□□□□ -1.7
RBM28-206ENST00000487602 LCE3BQ5TA77 95 aa4.43□□□□□ -1.7
RBM28-206ENST00000487602 MMP24-AS1A0A0U1RRL7 71 aa4.42□□□□□ -1.7
RBM28-206ENST00000487602 HCG22E2RYF7 251 aa4.41□□□□□ -1.7
RBM28-206ENST00000487602 WFDC13Q8IUB5 93 aa4.41□□□□□ -1.7
RBM28-206ENST00000487602 hDV103S1A0JD37 113 aa4.4□□□□□ -1.71
RBM28-206ENST00000487602 C9orf92A6NGG3 77 aa4.4□□□□□ -1.71
RBM28-206ENST00000487602 KRTAP13-3Q3SY46 172 aa4.4□□□□□ -1.71
RBM28-206ENST00000487602 CASC2Q6XLA1 102 aa4.4□□□□□ -1.71
RBM28-206ENST00000487602 TMEM254Q8TBM7 123 aa4.4□□□□□ -1.71
RBM28-206ENST00000487602 KRTAP16-1A8MUX0 517 aa4.39□□□□□ -1.71
RBM28-206ENST00000487602 HERC1Q15751 4861 aa4.39□□□□□ -1.71
RBM28-206ENST00000487602 TPRXLQ17RH7 258 aa4.38□□□□□ -1.71
RBM28-206ENST00000487602 MRPL34Q9BQ48 92 aaKnown RBP4.38□□□□□ -1.71
RBM28-206ENST00000487602 KRTAP9-9Q9BYP9 154 aa4.38□□□□□ -1.71
RBM28-206ENST00000487602 KRTAP9-4Q9BYQ2 154 aa4.38□□□□□ -1.71
RBM28-206ENST00000487602 FAM236AA0A1B0GUQ0 79 aa4.36□□□□□ -1.71
RBM28-206ENST00000487602 FAM236BA0A1B0GV22 79 aa4.36□□□□□ -1.71
RBM28-206ENST00000487602 Q8N9P0 234 aaPredicted RBP4.36□□□□□ -1.71
RBM28-206ENST00000487602 A8MUU9 505 aa4.34□□□□□ -1.71
RBM28-206ENST00000487602 SCGB1A1P11684 91 aa4.34□□□□□ -1.71
RBM28-206ENST00000487602 C20orf166-AS1Q96NR2 134 aa4.34□□□□□ -1.71
RBM28-206ENST00000487602 NDUFS5O43920 106 aa4.33□□□□□ -1.72
RBM28-206ENST00000487602 Q75L30 129 aa4.33□□□□□ -1.72
RBM28-206ENST00000487602 HMCN2Q8NDA2 5059 aa4.32□□□□□ -1.72
RBM28-206ENST00000487602 ATOX1O00244 68 aa4.31□□□□□ -1.72
RBM28-206ENST00000487602 OCR1Q9BZK8 76 aa4.31□□□□□ -1.72
RBM28-206ENST00000487602 TP53AIP1Q9HCN2 124 aa4.31□□□□□ -1.72
RBM28-206ENST00000487602 RPL37P61927 97 aaKnown RBP4.3□□□□□ -1.72
RBM28-206ENST00000487602 SMIM20Q8N5G0 67 aa4.3□□□□□ -1.72
RBM28-206ENST00000487602 LPAP08519 4548 aa4.3□□□□□ -1.72
RBM28-206ENST00000487602 TRAV7A0A075B6U4 112 aa4.29□□□□□ -1.72
RBM28-206ENST00000487602 UQCRQO14949 82 aa4.29□□□□□ -1.72
RBM28-206ENST00000487602 KRTAP19-4Q3LI73 84 aa4.29□□□□□ -1.72
RBM28-206ENST00000487602 ZCCHC13Q8WW36 166 aaKnown RBP4.28□□□□□ -1.72
RBM28-206ENST00000487602 Q5W150 140 aa4.27□□□□□ -1.73
RBM28-206ENST00000487602 ATP11AUNQ6ZP68 121 aa4.27□□□□□ -1.73
RBM28-206ENST00000487602 MUC17Q685J3 4493 aa4.27□□□□□ -1.73
RBM28-206ENST00000487602 PCP4P48539 62 aa4.26□□□□□ -1.73
RBM28-206ENST00000487602 C5orf47Q569G3 176 aa4.26□□□□□ -1.73
RBM28-206ENST00000487602 LCE4AQ5TA78 99 aa4.26□□□□□ -1.73
RBM28-206ENST00000487602 SERP2Q8N6R1 65 aa4.26□□□□□ -1.73
RBM28-206ENST00000487602 LRP2P98164 4655 aa4.26□□□□□ -1.73
RBM28-206ENST00000487602 KRTAP4-8A0A0G2JLE6 195 aa4.25□□□□□ -1.73
RBM28-206ENST00000487602 TRAV22A0A0B4J277 110 aa4.24□□□□□ -1.73
RBM28-206ENST00000487602 H0Y9P7 68 aa4.24□□□□□ -1.73
RBM28-206ENST00000487602 SEC61BP60468 96 aaKnown RBP4.24□□□□□ -1.73
RBM28-206ENST00000487602 PCOTHQ58A44 107 aa4.24□□□□□ -1.73
RBM28-206ENST00000487602 ANAPC13Q9BS18 74 aa4.24□□□□□ -1.73
RBM28-206ENST00000487602 COX7CP15954 63 aa4.23□□□□□ -1.73
RBM28-206ENST00000487602 MP68P56378 58 aa4.23□□□□□ -1.73
RBM28-206ENST00000487602 KRTAP9-7A8MTY7 169 aa4.21□□□□□ -1.74
RBM28-206ENST00000487602 H3BPC8 53 aa4.21□□□□□ -1.74
RBM28-206ENST00000487602 LINC00208Q96KT6 92 aa4.2□□□□□ -1.74
RBM28-206ENST00000487602 LOC101927531A0A1B0GV80 90 aa4.19□□□□□ -1.74
RBM28-206ENST00000487602 IGKV2-30P06310 120 aa4.19□□□□□ -1.74
RBM28-206ENST00000487602 C1orf64Q8NEQ6 169 aa4.19□□□□□ -1.74
RBM28-206ENST00000487602 IGKV2D-30A0A075B6S6 120 aa4.18□□□□□ -1.74
RBM28-206ENST00000487602 A0A0U1RQV1 116 aa4.18□□□□□ -1.74
RBM28-206ENST00000487602 SPINK7P58062 85 aa4.18□□□□□ -1.74
RBM28-206ENST00000487602 C20orf197Q8N268 126 aa4.18□□□□□ -1.74
RBM28-206ENST00000487602 CYP4F30PQ9H0H9 118 aa4.18□□□□□ -1.74
RBM28-206ENST00000487602 LCE1DQ5T752 114 aa4.17□□□□□ -1.74
RBM28-206ENST00000487602 C7orf65Q6ZTY9 151 aa4.17□□□□□ -1.74
RBM28-206ENST00000487602 SVIPQ8NHG7 77 aa4.17□□□□□ -1.74
RBM28-206ENST00000487602 CCDC179H3BU77 68 aa4.16□□□□□ -1.74
RBM28-206ENST00000487602 SNURFQ9Y675 71 aa4.16□□□□□ -1.74
RBM28-206ENST00000487602 UBR4Q5T4S7 5183 aa4.15□□□□□ -1.74
RBM28-206ENST00000487602 KLKP1Q107X0 134 aa4.15□□□□□ -1.75
RBM28-206ENST00000487602 KRTAP4-1Q9BYQ7 146 aa4.15□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 119.4 ms