RNA–Protein interactions for RNA: ENST00000487109.5

ABCA2-218, Transcript of ATP binding cassette subfamily A member 2, humanhuman

TSL 1 (best)

Gene ABCA2, Length 8,031 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA2-218ENST00000487109 C10orf95Q9H7T3 257 aa7.11□□□□□ -1.27
ABCA2-218ENST00000487109 FRYLO94915 3013 aa7.11□□□□□ -1.27
ABCA2-218ENST00000487109 UTP20O75691 2785 aaKnown RBP7.1□□□□□ -1.27
ABCA2-218ENST00000487109 LRBAP50851 2863 aa7.1□□□□□ -1.27
ABCA2-218ENST00000487109 A8MU10 97 aa7.1□□□□□ -1.27
ABCA2-218ENST00000487109 KRTAP21-3Q3LHN1 58 aa7.1□□□□□ -1.27
ABCA2-218ENST00000487109 COL12A1Q99715 3063 aa7.09□□□□□ -1.27
ABCA2-218ENST00000487109 KRTAP29-1A8MX34 341 aaPredicted RBP7.04□□□□□ -1.28
ABCA2-218ENST00000487109 IGSF10Q6WRI0 2623 aa7.02□□□□□ -1.28
ABCA2-218ENST00000487109 UBR5O95071 2799 aaPredicted RBP7.02□□□□□ -1.29
ABCA2-218ENST00000487109 ITPR1Q14643 2758 aa7□□□□□ -1.29
ABCA2-218ENST00000487109 BOD1L1Q8NFC6 3051 aa7□□□□□ -1.29
ABCA2-218ENST00000487109 NOTCH2NLQ7Z3S9 236 aa6.99□□□□□ -1.29
ABCA2-218ENST00000487109 A6NN06 94 aa6.97□□□□□ -1.29
ABCA2-218ENST00000487109 Q6ZRN7 208 aaPredicted RBP6.97□□□□□ -1.29
ABCA2-218ENST00000487109 ZZEF1O43149 2961 aa6.95□□□□□ -1.3
ABCA2-218ENST00000487109 ATMQ13315 3056 aa6.94□□□□□ -1.3
ABCA2-218ENST00000487109 ASPMQ8IZT6 3477 aa6.94□□□□□ -1.3
ABCA2-218ENST00000487109 ADGRG4Q8IZF6 3080 aa6.9□□□□□ -1.31
ABCA2-218ENST00000487109 KRTAP10-8P60410 259 aa6.88□□□□□ -1.31
ABCA2-218ENST00000487109 HIVEP1P15822 2718 aa6.87□□□□□ -1.31
ABCA2-218ENST00000487109 PP632Q6XCG6 107 aa6.85□□□□□ -1.31
ABCA2-218ENST00000487109 TACC2O95359 2948 aa6.85□□□□□ -1.31
ABCA2-218ENST00000487109 KRTAP13-1Q8IUC0 172 aa6.84□□□□□ -1.31
ABCA2-218ENST00000487109 DCHS1Q96JQ0 3298 aa6.84□□□□□ -1.32
ABCA2-218ENST00000487109 DMDP11532 3685 aa6.83□□□□□ -1.32
ABCA2-218ENST00000487109 NBEAQ8NFP9 2946 aa6.82□□□□□ -1.32
ABCA2-218ENST00000487109 KRTAP11-1Q8IUC1 163 aa6.81□□□□□ -1.32
ABCA2-218ENST00000487109 CELSR2Q9HCU4 2923 aa6.8□□□□□ -1.32
ABCA2-218ENST00000487109 LAMA5O15230 3695 aa6.8□□□□□ -1.32
ABCA2-218ENST00000487109 DMXL1Q9Y485 3027 aa6.79□□□□□ -1.32
ABCA2-218ENST00000487109 KRTAP13-2Q52LG2 175 aa6.79□□□□□ -1.32
ABCA2-218ENST00000487109 P0C880 135 aa6.77□□□□□ -1.33
ABCA2-218ENST00000487109 TNRC18O15417 2968 aaPredicted RBP6.73□□□□□ -1.33
ABCA2-218ENST00000487109 LOC400499M0QZD8 3231 aa6.73□□□□□ -1.33
ABCA2-218ENST00000487109 KRTAP7-1Q8IUC3 87 aa6.73□□□□□ -1.33
ABCA2-218ENST00000487109 TENM1Q9UKZ4 2725 aa6.73□□□□□ -1.33
ABCA2-218ENST00000487109 ZFHX4Q86UP3 3567 aa6.73□□□□□ -1.33
ABCA2-218ENST00000487109 PRO2289Q9P1D8 64 aa6.72□□□□□ -1.33
ABCA2-218ENST00000487109 A0A1B0GVY2 172 aa6.71□□□□□ -1.34
ABCA2-218ENST00000487109 FLNCQ14315 2725 aa6.7□□□□□ -1.34
ABCA2-218ENST00000487109 NF1P21359 2839 aa6.67□□□□□ -1.34
ABCA2-218ENST00000487109 CSMD1Q96PZ7 3565 aa6.67□□□□□ -1.34
ABCA2-218ENST00000487109 CELSR1Q9NYQ6 3014 aa6.66□□□□□ -1.34
ABCA2-218ENST00000487109 KRTAP10-10P60014 251 aa6.61□□□□□ -1.35
ABCA2-218ENST00000487109 SMG1Q96Q15 3661 aaKnown RBP6.6□□□□□ -1.35
ABCA2-218ENST00000487109 NBPF19A0A087WUL8 3843 aa6.59□□□□□ -1.35
ABCA2-218ENST00000487109 DCHS2Q6V1P9 2916 aa6.59□□□□□ -1.36
ABCA2-218ENST00000487109 NIPBLQ6KC79 2804 aaeCLIP6.58□□□□□ -1.36
ABCA2-218ENST00000487109 TPRXLQ17RH7 258 aa6.55□□□□□ -1.36
ABCA2-218ENST00000487109 SPENQ96T58 3664 aaKnown RBP6.54□□□□□ -1.36
ABCA2-218ENST00000487109 XP32Q5T750 250 aa6.54□□□□□ -1.36
ABCA2-218ENST00000487109 RELNP78509 3460 aa6.52□□□□□ -1.37
ABCA2-218ENST00000487109 H0YAA0 97 aa6.51□□□□□ -1.37
ABCA2-218ENST00000487109 TENM3Q9P273 2699 aa6.5□□□□□ -1.37
ABCA2-218ENST00000487109 KRTAP1-4P0C5Y4 121 aa6.48□□□□□ -1.37
ABCA2-218ENST00000487109 FBN2P35556 2912 aa6.47□□□□□ -1.37
ABCA2-218ENST00000487109 ZFHX3Q15911 3703 aa6.46□□□□□ -1.38
ABCA2-218ENST00000487109 BSNQ9UPA5 3926 aa6.44□□□□□ -1.38
ABCA2-218ENST00000487109 TGP01266 2768 aa6.43□□□□□ -1.38
ABCA2-218ENST00000487109 PDZD2O15018 2839 aa6.42□□□□□ -1.38
ABCA2-218ENST00000487109 TENM4Q6N022 2769 aa6.42□□□□□ -1.38
ABCA2-218ENST00000487109 VWFP04275 2813 aa6.4□□□□□ -1.38
ABCA2-218ENST00000487109 SVEP1Q4LDE5 3571 aa6.4□□□□□ -1.38
ABCA2-218ENST00000487109 PKD1L1Q8TDX9 2849 aa6.39□□□□□ -1.39
ABCA2-218ENST00000487109 ZANQ9Y493 2812 aa6.38□□□□□ -1.39
ABCA2-218ENST00000487109 MUC3AQ02505 3323 aa6.37□□□□□ -1.39
ABCA2-218ENST00000487109 HRNRQ86YZ3 2850 aaPredicted RBP6.36□□□□□ -1.39
ABCA2-218ENST00000487109 KRTAP13-3Q3SY46 172 aa6.31□□□□□ -1.4
ABCA2-218ENST00000487109 VPS13CQ709C8 3753 aa6.26□□□□□ -1.41
ABCA2-218ENST00000487109 KRTAP12-2P59991 146 aa6.23□□□□□ -1.41
ABCA2-218ENST00000487109 MXRA5Q9NR99 2828 aa6.22□□□□□ -1.41
ABCA2-218ENST00000487109 CUBNO60494 3623 aa6.18□□□□□ -1.42
ABCA2-218ENST00000487109 KRTAP13-4Q3LI77 160 aa6.14□□□□□ -1.43
ABCA2-218ENST00000487109 SRRM2Q9UQ35 2752 aaKnown RBP6.11□□□□□ -1.43
ABCA2-218ENST00000487109 TENM2Q9NT68 2774 aa6.11□□□□□ -1.43
ABCA2-218ENST00000487109 KRTAP15-1Q3LI76 137 aa6.11□□□□□ -1.43
ABCA2-218ENST00000487109 COL7A1Q02388 2944 aa6.07□□□□□ -1.44
ABCA2-218ENST00000487109 CSMD2Q7Z408 3487 aa6.07□□□□□ -1.44
ABCA2-218ENST00000487109 AKAP9Q99996 3911 aa6.06□□□□□ -1.44
ABCA2-218ENST00000487109 KRTAP12-1P59990 96 aa5.97□□□□□ -1.45
ABCA2-218ENST00000487109 MEGF8Q7Z7M0 2845 aa5.96□□□□□ -1.46
ABCA2-218ENST00000487109 INE1O15225 51 aa5.86□□□□□ -1.47
ABCA2-218ENST00000487109 ZNF469Q96JG9 3925 aaPredicted RBP5.85□□□□□ -1.47
ABCA2-218ENST00000487109 CRCT1Q9UGL9 99 aa5.84□□□□□ -1.47
ABCA2-218ENST00000487109 TRRAPQ9Y4A5 3859 aa5.82□□□□□ -1.48
ABCA2-218ENST00000487109 FBN1P35555 2871 aaKnown RBP5.82□□□□□ -1.48
ABCA2-218ENST00000487109 FBN3Q75N90 2809 aa5.79□□□□□ -1.48
ABCA2-218ENST00000487109 CSMD3Q7Z407 3707 aa5.78□□□□□ -1.48
ABCA2-218ENST00000487109 ANK3Q12955 4377 aaKnown RBP5.69□□□□□ -1.5
ABCA2-218ENST00000487109 KRTAP10-12P60413 245 aa5.68□□□□□ -1.5
ABCA2-218ENST00000487109 KRTAP3-1Q9BYR8 98 aa5.66□□□□□ -1.5
ABCA2-218ENST00000487109 OTOGQ6ZRI0 2925 aa5.65□□□□□ -1.5
ABCA2-218ENST00000487109 KRTAP10-6P60371 365 aaPredicted RBP5.55□□□□□ -1.52
ABCA2-218ENST00000487109 MT1HL1P0DM35 61 aa5.54□□□□□ -1.52
ABCA2-218ENST00000487109 KRTAP12-3P60328 96 aa5.47□□□□□ -1.53
ABCA2-218ENST00000487109 CMYA5Q8N3K9 4069 aa5.43□□□□□ -1.54
ABCA2-218ENST00000487109 HUWE1Q7Z6Z7 4374 aaKnown RBP5.42□□□□□ -1.54
ABCA2-218ENST00000487109 KRTAP23-1A1A580 65 aa5.42□□□□□ -1.54
ABCA2-218ENST00000487109 KRTAP10-5P60370 271 aa5.4□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 90.1 ms