RNA–Protein interactions for RNA: ENST00000487109.5

ABCA2-218, Transcript of ATP binding cassette subfamily A member 2, humanhuman

TSL 1 (best)

Gene ABCA2, Length 8,031 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA2-218ENST00000487109 UTP3Q9NQZ2 479 aaKnown RBP eCLIP15.22■□□□□ 0.032e-6■■■■■ 151.5
ABCA2-218ENST00000487109 SF3B1O75533 1304 aaKnown RBP eCLIP12.76□□□□□ -0.373e-7■■■■■ 117.5
ABCA2-218ENST00000487109 DDX59Q5T1V6 619 aaKnown RBP eCLIP12.39□□□□□ -0.431e-13■■■■■ 54.9
ABCA2-218ENST00000487109 RBFOX2O43251 390 aaKnown RBP eCLIP10.88□□□□□ -0.678e-7■■■■■ 53.3
ABCA2-218ENST00000487109 AQRO60306 1485 aaKnown RBP eCLIP14.64□□□□□ -0.073e-7■■■■■ 50.6
ABCA2-218ENST00000487109 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP10.62□□□□□ -0.716e-7■■■■■ 39.5
ABCA2-218ENST00000487109 DDX24Q9GZR7 859 aaKnown RBP eCLIP14.59□□□□□ -0.074e-7■■■■■ 39.3
ABCA2-218ENST00000487109 GTF2F1P35269 517 aaKnown RBP eCLIP14.12□□□□□ -0.151e-9■■■■■ 37.2
ABCA2-218ENST00000487109 CPEB4Q17RY0 729 aaKnown RBP eCLIP11.48□□□□□ -0.578e-6■■■■■ 36.9
ABCA2-218ENST00000487109 PCBP1Q15365 356 aaKnown RBP eCLIP12.52□□□□□ -0.48e-6■■■■■ 32.8
ABCA2-218ENST00000487109 SF3B4Q15427 424 aaKnown RBP eCLIP11.78□□□□□ -0.528e-7■■■■■ 32.7
ABCA2-218ENST00000487109 EFTUD2Q15029 972 aaKnown RBP eCLIP13.21□□□□□ -0.298e-7■■■■■ 30.6
ABCA2-218ENST00000487109 PABPC4Q13310 644 aaKnown RBP eCLIP13.54□□□□□ -0.245e-7■■■■■ 30.4
ABCA2-218ENST00000487109 PUM1Q14671 1186 aaKnown RBP eCLIP12.25□□□□□ -0.454e-7■■■■■ 29.1
ABCA2-218ENST00000487109 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP12.78□□□□□ -0.368e-7■■■■■ 28.2
ABCA2-218ENST00000487109 PTBP1P26599 531 aaKnown RBP eCLIP11.19□□□□□ -0.622e-11■■■■■ 27.6
ABCA2-218ENST00000487109 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP14.41□□□□□ -0.12e-12■■■■□ 26.6
ABCA2-218ENST00000487109 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP12.07□□□□□ -0.483e-8■■■■□ 26.1
ABCA2-218ENST00000487109 PCBP2Q15366 365 aaKnown RBP eCLIP12.01□□□□□ -0.493e-6■■■■□ 25.7
ABCA2-218ENST00000487109 PRPF4O43172 522 aaKnown RBP eCLIP13.23□□□□□ -0.293e-7■■■■□ 25.6
ABCA2-218ENST00000487109 U2AF2P26368 475 aaKnown RBP eCLIP13.54□□□□□ -0.248e-6■■■■□ 25
ABCA2-218ENST00000487109 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP12.32□□□□□ -0.446e-7■■■■□ 24.8
ABCA2-218ENST00000487109 ZRANB2O95218 330 aaKnown RBP eCLIP13.31□□□□□ -0.285e-6■■■■□ 23.5
ABCA2-218ENST00000487109 METAP2P50579 478 aaKnown RBP eCLIP14.01□□□□□ -0.177e-6■■■■□ 21.8
ABCA2-218ENST00000487109 PPIGQ13427 754 aaKnown RBP eCLIP12.21□□□□□ -0.451e-6■■■■□ 20.6
ABCA2-218ENST00000487109 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP12.12□□□□□ -0.474e-6■■■■□ 19.9
ABCA2-218ENST00000487109 DDX3XO00571 662 aaKnown RBP eCLIP12.27□□□□□ -0.451e-11■■■■□ 19.4
ABCA2-218ENST00000487109 HNRNPKP61978 463 aaKnown RBP eCLIP11.96□□□□□ -0.54e-9■■■■□ 19.3
ABCA2-218ENST00000487109 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP12.7□□□□□ -0.381e-7■■■□□ 17.4
ABCA2-218ENST00000487109 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.12□□□□□ -0.314e-8■■■□□ 17.1
ABCA2-218ENST00000487109 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP14.05□□□□□ -0.167e-7■■■□□ 17.1
ABCA2-218ENST00000487109 YBX3P16989 372 aaKnown RBP eCLIP12.42□□□□□ -0.421e-6■■■□□ 15.1
ABCA2-218ENST00000487109 ZNF622Q969S3 477 aaKnown RBP eCLIP13.98□□□□□ -0.171e-6■■■□□ 14.8
ABCA2-218ENST00000487109 SDAD1Q9NVU7 687 aaKnown RBP eCLIP13.95□□□□□ -0.188e-6■■■□□ 14.7
ABCA2-218ENST00000487109 DDX55Q8NHQ9 600 aaKnown RBP eCLIP13.79□□□□□ -0.22e-15■■□□□ 14.4
ABCA2-218ENST00000487109 EIF3HO15372 352 aaKnown RBP eCLIP12.71□□□□□ -0.382e-6■■□□□ 13.9
ABCA2-218ENST00000487109 UPF1Q92900 1129 aaKnown RBP eCLIP12.1□□□□□ -0.475e-6■□□□□ 10.5
ABCA2-218ENST00000487109 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.23■□□□□ 0.191e-6■□□□□ 9.5
ABCA2-218ENST00000487109 HLTFQ14527 1009 aaKnown RBP eCLIP14.29□□□□□ -0.124e-7■□□□□ 8.9
ABCA2-218ENST00000487109 PABPN1Q86U42 306 aaKnown RBP eCLIP17.06■□□□□ 0.327e-6■□□□□ 8.8
Retrieved 40 of 40 RNA–protein pairs in 8 ms