RNA–Protein interactions for RNA: ENST00000486335.1

CCDC142-208, Transcript of coiled-coil domain containing 142, humanhuman

TSL 5

Gene CCDC142, Length 566 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC142-208ENST00000486335 CD164Q04900 197 aa5.18□□□□□ -1.58
CCDC142-208ENST00000486335 KRTAP13-3Q3SY46 172 aa5.18□□□□□ -1.58
CCDC142-208ENST00000486335 LINC00304Q8N9R0 145 aa5.18□□□□□ -1.58
CCDC142-208ENST00000486335 TRBV7-7A0A0K0K1E9 115 aa5.17□□□□□ -1.58
CCDC142-208ENST00000486335 KRTAP10-6P60371 365 aaPredicted RBP5.14□□□□□ -1.59
CCDC142-208ENST00000486335 A0A087WSZ3 146 aa5.13□□□□□ -1.59
CCDC142-208ENST00000486335 NREPQ16612 68 aa5.13□□□□□ -1.59
CCDC142-208ENST00000486335 Q5XG85 94 aa5.13□□□□□ -1.59
CCDC142-208ENST00000486335 Q6ZVQ6 151 aa5.13□□□□□ -1.59
CCDC142-208ENST00000486335 CXCL6P80162 114 aa5.12□□□□□ -1.59
CCDC142-208ENST00000486335 C4orf48Q5BLP8 95 aa5.12□□□□□ -1.59
CCDC142-208ENST00000486335 SPAG11AQ6PDA7 123 aa5.12□□□□□ -1.59
CCDC142-208ENST00000486335 SSPOA2VEC9 5147 aa5.11□□□□□ -1.59
CCDC142-208ENST00000486335 SPINK1P00995 79 aa5.11□□□□□ -1.59
CCDC142-208ENST00000486335 RPS29P62273 56 aaKnown RBP5.1□□□□□ -1.59
CCDC142-208ENST00000486335 HRCT1Q6UXD1 115 aa5.1□□□□□ -1.59
CCDC142-208ENST00000486335 LINC00472Q9H8W2 130 aa5.1□□□□□ -1.59
CCDC142-208ENST00000486335 SS18L2Q9UHA2 77 aa5.1□□□□□ -1.59
CCDC142-208ENST00000486335 FP248Q71RG6 208 aaPredicted RBP5.09□□□□□ -1.59
CCDC142-208ENST00000486335 FLGP20930 4061 aaPredicted RBP5.08□□□□□ -1.6
CCDC142-208ENST00000486335 MT-ATP8P03928 68 aa5.07□□□□□ -1.6
CCDC142-208ENST00000486335 SEC61BP60468 96 aaKnown RBP5.07□□□□□ -1.6
CCDC142-208ENST00000486335 Q96NJ1 140 aa5.07□□□□□ -1.6
CCDC142-208ENST00000486335 J3KT08 172 aa5.06□□□□□ -1.6
CCDC142-208ENST00000486335 BPY2O14599 106 aa5.06□□□□□ -1.6
CCDC142-208ENST00000486335 PCP4P48539 62 aa5.06□□□□□ -1.6
CCDC142-208ENST00000486335 XP32Q5T750 250 aa5.06□□□□□ -1.6
CCDC142-208ENST00000486335 SMIM20Q8N5G0 67 aa5.06□□□□□ -1.6
CCDC142-208ENST00000486335 LIMD2Q9BT23 127 aa5.06□□□□□ -1.6
CCDC142-208ENST00000486335 USH2AO75445 5202 aa5.06□□□□□ -1.6
CCDC142-208ENST00000486335 ATOX1O00244 68 aa5.05□□□□□ -1.6
CCDC142-208ENST00000486335 IGKV3D-7A0A0C4DH55 119 aa5.04□□□□□ -1.6
CCDC142-208ENST00000486335 DSCR10P59022 87 aa5.04□□□□□ -1.6
CCDC142-208ENST00000486335 C1orf195Q5TG92 126 aa5.03□□□□□ -1.6
CCDC142-208ENST00000486335 DEFB116Q30KQ4 102 aa5.02□□□□□ -1.61
CCDC142-208ENST00000486335 A8MWP4 228 aa5.01□□□□□ -1.61
CCDC142-208ENST00000486335 IGKV4-1P06312 121 aa5.01□□□□□ -1.61
CCDC142-208ENST00000486335 ANAPC13Q9BS18 74 aa5.01□□□□□ -1.61
CCDC142-208ENST00000486335 FCGBPQ9Y6R7 5405 aaPredicted RBP5□□□□□ -1.61
CCDC142-208ENST00000486335 HIST1H4AP62805 103 aaKnown RBP5□□□□□ -1.61
CCDC142-208ENST00000486335 PRR15Q8IV56 129 aa5□□□□□ -1.61
CCDC142-208ENST00000486335 NDUFB1O75438 58 aa4.99□□□□□ -1.61
CCDC142-208ENST00000486335 FAM236AA0A1B0GUQ0 79 aa4.98□□□□□ -1.61
CCDC142-208ENST00000486335 FAM236BA0A1B0GV22 79 aa4.98□□□□□ -1.61
CCDC142-208ENST00000486335 K7EQZ3 153 aa4.98□□□□□ -1.61
CCDC142-208ENST00000486335 PCOTHQ58A44 107 aa4.97□□□□□ -1.61
CCDC142-208ENST00000486335 Q8N9L7 120 aa4.97□□□□□ -1.61
CCDC142-208ENST00000486335 A0A1B0GVX0 72 aa4.96□□□□□ -1.62
CCDC142-208ENST00000486335 SYNE2Q8WXH0 6885 aaKnown RBP4.96□□□□□ -1.62
CCDC142-208ENST00000486335 A0A087WVE0 104 aa4.95□□□□□ -1.62
CCDC142-208ENST00000486335 UQCRQO14949 82 aa4.95□□□□□ -1.62
CCDC142-208ENST00000486335 C8orf87E5RJ46 101 aa4.93□□□□□ -1.62
CCDC142-208ENST00000486335 SERP2Q8N6R1 65 aa4.93□□□□□ -1.62
CCDC142-208ENST00000486335 TRAV7A0A075B6U4 112 aa4.92□□□□□ -1.62
CCDC142-208ENST00000486335 IGHV6-1A0A0B4J1U7 121 aa4.92□□□□□ -1.62
CCDC142-208ENST00000486335 HCG22E2RYF7 251 aa4.92□□□□□ -1.62
CCDC142-208ENST00000486335 C8orf17Q9NRJ1 99 aa4.92□□□□□ -1.62
CCDC142-208ENST00000486335 MMP24-AS1A0A0U1RRL7 71 aa4.91□□□□□ -1.62
CCDC142-208ENST00000486335 COX7CP15954 63 aa4.91□□□□□ -1.62
CCDC142-208ENST00000486335 LINC00313P59037 77 aa4.91□□□□□ -1.62
CCDC142-208ENST00000486335 NOTCH2NLQ7Z3S9 236 aa4.91□□□□□ -1.62
CCDC142-208ENST00000486335 CASC2Q6XLA1 102 aa4.9□□□□□ -1.63
CCDC142-208ENST00000486335 KRTAP9-8Q9BYQ0 159 aa4.9□□□□□ -1.63
CCDC142-208ENST00000486335 hDV103S1A0JD37 113 aa4.89□□□□□ -1.63
CCDC142-208ENST00000486335 M0R2T5 61 aa4.89□□□□□ -1.63
CCDC142-208ENST00000486335 TMEM254Q8TBM7 123 aa4.89□□□□□ -1.63
CCDC142-208ENST00000486335 C9orf92A6NGG3 77 aa4.88□□□□□ -1.63
CCDC142-208ENST00000486335 NDUFC1O43677 76 aa4.88□□□□□ -1.63
CCDC142-208ENST00000486335 MACF1Q9UPN3 7388 aaKnown RBP4.88□□□□□ -1.63
CCDC142-208ENST00000486335 KRTAP16-1A8MUX0 517 aa4.87□□□□□ -1.63
CCDC142-208ENST00000486335 WFDC13Q8IUB5 93 aa4.87□□□□□ -1.63
CCDC142-208ENST00000486335 MRPL34Q9BQ48 92 aaKnown RBP4.87□□□□□ -1.63
CCDC142-208ENST00000486335 KRTAP19-1Q8IUB9 90 aa4.86□□□□□ -1.63
CCDC142-208ENST00000486335 Q8N9P0 234 aaPredicted RBP4.86□□□□□ -1.63
CCDC142-208ENST00000486335 OCR1Q9BZK8 76 aa4.86□□□□□ -1.63
CCDC142-208ENST00000486335 TP53AIP1Q9HCN2 124 aa4.85□□□□□ -1.63
CCDC142-208ENST00000486335 H3BPC8 53 aa4.84□□□□□ -1.63
CCDC142-208ENST00000486335 C5orf47Q569G3 176 aa4.84□□□□□ -1.63
CCDC142-208ENST00000486335 LCE2BO14633 110 aa4.83□□□□□ -1.64
CCDC142-208ENST00000486335 KLKP1Q107X0 134 aa4.82□□□□□ -1.64
CCDC142-208ENST00000486335 A8MUU9 505 aa4.81□□□□□ -1.64
CCDC142-208ENST00000486335 C20orf166-AS1Q96NR2 134 aa4.81□□□□□ -1.64
CCDC142-208ENST00000486335 MP68P56378 58 aa4.8□□□□□ -1.64
CCDC142-208ENST00000486335 ATP5EP56381 51 aaPredicted RBP4.8□□□□□ -1.64
CCDC142-208ENST00000486335 TMEM258P61165 79 aa4.79□□□□□ -1.64
CCDC142-208ENST00000486335 NDUFS5O43920 106 aa4.78□□□□□ -1.64
CCDC142-208ENST00000486335 COX6B2Q6YFQ2 88 aa4.78□□□□□ -1.64
CCDC142-208ENST00000486335 Q75L30 129 aa4.78□□□□□ -1.64
CCDC142-208ENST00000486335 CCDC179H3BU77 68 aa4.76□□□□□ -1.65
CCDC142-208ENST00000486335 RPL37P61927 97 aaKnown RBP4.76□□□□□ -1.65
CCDC142-208ENST00000486335 C20orf197Q8N268 126 aa4.76□□□□□ -1.65
CCDC142-208ENST00000486335 KRTAP9-3Q9BYQ3 159 aa4.76□□□□□ -1.65
CCDC142-208ENST00000486335 MT2AP02795 61 aa4.75□□□□□ -1.65
CCDC142-208ENST00000486335 Q5W150 140 aa4.75□□□□□ -1.65
CCDC142-208ENST00000486335 TRAV22A0A0B4J277 110 aa4.74□□□□□ -1.65
CCDC142-208ENST00000486335 MT1FP04733 61 aa4.73□□□□□ -1.65
CCDC142-208ENST00000486335 ZCCHC13Q8WW36 166 aaKnown RBP4.73□□□□□ -1.65
CCDC142-208ENST00000486335 H0Y9P7 68 aa4.72□□□□□ -1.65
CCDC142-208ENST00000486335 ATP11AUNQ6ZP68 121 aa4.7□□□□□ -1.66
CCDC142-208ENST00000486335 LINC00208Q96KT6 92 aa4.7□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms