RNA–Protein interactions for RNA: ENST00000475551.5

CCM2-207, Transcript of CCM2 scaffold protein, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CCM2, Length 2,471 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-207ENST00000475551 PRR26Q8N8Z3 221 aa10.57□□□□□ -0.72
CCM2-207ENST00000475551 UBE2DNLQ8IWF7 75 aa10.55□□□□□ -0.72
CCM2-207ENST00000475551 WWC2-AS2Q96NR7 200 aa10.55□□□□□ -0.72
CCM2-207ENST00000475551 KRTAP13-3Q3SY46 172 aa10.55□□□□□ -0.72
CCM2-207ENST00000475551 ZNF706Q9Y5V0 76 aaPredicted RBP10.55□□□□□ -0.72
CCM2-207ENST00000475551 ACYP2P14621 99 aa10.53□□□□□ -0.72
CCM2-207ENST00000475551 DNAH7Q8WXX0 4024 aa10.53□□□□□ -0.72
CCM2-207ENST00000475551 CSMD3Q7Z407 3707 aa10.53□□□□□ -0.72
CCM2-207ENST00000475551 Q5W150 140 aa10.52□□□□□ -0.73
CCM2-207ENST00000475551 SPACA4Q8TDM5 124 aa10.49□□□□□ -0.73
CCM2-207ENST00000475551 APLNQ9ULZ1 77 aa10.49□□□□□ -0.73
CCM2-207ENST00000475551 LINC00313P59037 77 aa10.48□□□□□ -0.73
CCM2-207ENST00000475551 STARD9Q9P2P6 4700 aa10.47□□□□□ -0.73
CCM2-207ENST00000475551 NUPR2A6NF83 97 aa10.47□□□□□ -0.73
CCM2-207ENST00000475551 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP10.46□□□□□ -0.73
CCM2-207ENST00000475551 ALMS1Q8TCU4 4167 aa10.46□□□□□ -0.73
CCM2-207ENST00000475551 DYNC2H1Q8NCM8 4307 aaKnown RBP10.46□□□□□ -0.73
CCM2-207ENST00000475551 DMAC1Q96GE9 116 aa10.44□□□□□ -0.74
CCM2-207ENST00000475551 C4orf48Q5BLP8 95 aa10.43□□□□□ -0.74
CCM2-207ENST00000475551 PLECQ15149 4684 aaKnown RBP10.42□□□□□ -0.74
CCM2-207ENST00000475551 PLA2G1BP04054 148 aaKnown RBP10.42□□□□□ -0.74
CCM2-207ENST00000475551 Q6ZRN7 208 aaPredicted RBP10.42□□□□□ -0.74
CCM2-207ENST00000475551 ANAPC11Q9NYG5 84 aa10.41□□□□□ -0.74
CCM2-207ENST00000475551 IGLV5-52A0A0A0MRZ9 124 aa10.4□□□□□ -0.75
CCM2-207ENST00000475551 NBDYA0A0U1RRE5 68 aa10.39□□□□□ -0.75
CCM2-207ENST00000475551 PSORS1C2Q9UIG4 136 aa10.39□□□□□ -0.75
CCM2-207ENST00000475551 SPINK6Q6UWN8 80 aa10.39□□□□□ -0.75
CCM2-207ENST00000475551 C8orf87E5RJ46 101 aa10.38□□□□□ -0.75
CCM2-207ENST00000475551 ZNF861PO60384 105 aa10.38□□□□□ -0.75
CCM2-207ENST00000475551 SPATA8Q6RVD6 105 aa10.38□□□□□ -0.75
CCM2-207ENST00000475551 PRAC1Q96KF2 57 aa10.38□□□□□ -0.75
CCM2-207ENST00000475551 A0A1B0GU69 56 aa10.38□□□□□ -0.75
CCM2-207ENST00000475551 RTL8CO15255 209 aa10.32□□□□□ -0.76
CCM2-207ENST00000475551 ADM2Q7Z4H4 148 aa10.32□□□□□ -0.76
CCM2-207ENST00000475551 FAM229AH3BQW9 127 aa10.3□□□□□ -0.76
CCM2-207ENST00000475551 DNAH8Q96JB1 4490 aa10.29□□□□□ -0.76
CCM2-207ENST00000475551 IGKV2-30P06310 120 aa10.27□□□□□ -0.77
CCM2-207ENST00000475551 MIR22HGQ0VDD5 57 aa10.27□□□□□ -0.77
CCM2-207ENST00000475551 UQCR11O14957 56 aa10.27□□□□□ -0.77
CCM2-207ENST00000475551 LINC01554Q52M75 96 aa10.26□□□□□ -0.77
CCM2-207ENST00000475551 CIRBP-AS1Q8TBR5 109 aa10.26□□□□□ -0.77
CCM2-207ENST00000475551 VPS13DQ5THJ4 4388 aa10.25□□□□□ -0.77
CCM2-207ENST00000475551 A0A087WTM6 91 aa10.25□□□□□ -0.77
CCM2-207ENST00000475551 LY6G6CO95867 125 aa10.24□□□□□ -0.77
CCM2-207ENST00000475551 SSBP3-AS1Q7Z2R9 100 aa10.22□□□□□ -0.77
CCM2-207ENST00000475551 FRAS1Q86XX4 4008 aa10.22□□□□□ -0.77
CCM2-207ENST00000475551 IGLV7-43P04211 117 aa10.18□□□□□ -0.78
CCM2-207ENST00000475551 RETNLBQ9BQ08 111 aa10.18□□□□□ -0.78
CCM2-207ENST00000475551 KMT2AQ03164 3969 aa10.18□□□□□ -0.78
CCM2-207ENST00000475551 HECTD4Q9Y4D8 3996 aa10.13□□□□□ -0.79
CCM2-207ENST00000475551 HYDINQ4G0P3 5121 aa10.12□□□□□ -0.79
CCM2-207ENST00000475551 KRTAP16-1A8MUX0 517 aa10.11□□□□□ -0.79
CCM2-207ENST00000475551 SACSQ9NZJ4 4579 aa10.1□□□□□ -0.79
CCM2-207ENST00000475551 DNAH6Q9C0G6 4158 aa10.06□□□□□ -0.8
CCM2-207ENST00000475551 DNAH2Q9P225 4427 aa10.06□□□□□ -0.8
CCM2-207ENST00000475551 H3BS24 57 aa10.06□□□□□ -0.8
CCM2-207ENST00000475551 KMT2CQ8NEZ4 4911 aaKnown RBP10.05□□□□□ -0.8
CCM2-207ENST00000475551 IGKV2D-30A0A075B6S6 120 aa10.05□□□□□ -0.8
CCM2-207ENST00000475551 DNAH17Q9UFH2 4485 aa10.05□□□□□ -0.8
CCM2-207ENST00000475551 CSAG1Q6PB30 78 aa10.05□□□□□ -0.8
CCM2-207ENST00000475551 C1orf134Q5TEV5 83 aa10.02□□□□□ -0.81
CCM2-207ENST00000475551 KRTAP13-2Q52LG2 175 aa9.98□□□□□ -0.81
CCM2-207ENST00000475551 RYR2Q92736 4967 aa9.97□□□□□ -0.81
CCM2-207ENST00000475551 RYR3Q15413 4870 aa9.89□□□□□ -0.83
CCM2-207ENST00000475551 SPINK1P00995 79 aa9.88□□□□□ -0.83
CCM2-207ENST00000475551 FAT2Q9NYQ8 4349 aa9.87□□□□□ -0.83
CCM2-207ENST00000475551 A8MUU9 505 aa9.83□□□□□ -0.84
CCM2-207ENST00000475551 Q6ZSA8 131 aa9.83□□□□□ -0.84
CCM2-207ENST00000475551 Q8N1X5 172 aa9.83□□□□□ -0.84
CCM2-207ENST00000475551 DNAH11Q96DT5 4516 aa9.83□□□□□ -0.84
CCM2-207ENST00000475551 H0YAA0 97 aa9.81□□□□□ -0.84
CCM2-207ENST00000475551 KRTAP10-2P60368 255 aa9.8□□□□□ -0.84
CCM2-207ENST00000475551 PKD1P98161 4303 aa9.79□□□□□ -0.84
CCM2-207ENST00000475551 KRTAP1-4P0C5Y4 121 aa9.78□□□□□ -0.84
CCM2-207ENST00000475551 KRTAP25-1Q3LHN0 102 aa9.76□□□□□ -0.85
CCM2-207ENST00000475551 LINC00304Q8N9R0 145 aa9.74□□□□□ -0.85
CCM2-207ENST00000475551 DNAH5Q8TE73 4624 aa9.72□□□□□ -0.85
CCM2-207ENST00000475551 A0A1B0GVY2 172 aa9.72□□□□□ -0.85
CCM2-207ENST00000475551 TYMSOSQ8TAI1 123 aa9.71□□□□□ -0.86
CCM2-207ENST00000475551 A0A1B0GU33 70 aa9.7□□□□□ -0.86
CCM2-207ENST00000475551 PKHD1P08F94 4074 aa9.68□□□□□ -0.86
CCM2-207ENST00000475551 H1FX-AS1Q4G0G2 97 aa9.66□□□□□ -0.86
CCM2-207ENST00000475551 KRTAP10-1P60331 282 aa9.65□□□□□ -0.86
CCM2-207ENST00000475551 LRP1BQ9NZR2 4599 aa9.63□□□□□ -0.87
CCM2-207ENST00000475551 ROMO1P60602 79 aa9.62□□□□□ -0.87
CCM2-207ENST00000475551 KRTAP3-1Q9BYR8 98 aa9.59□□□□□ -0.87
CCM2-207ENST00000475551 RPS29P62273 56 aaKnown RBP9.59□□□□□ -0.87
CCM2-207ENST00000475551 DYNC1H1Q14204 4646 aaKnown RBP9.58□□□□□ -0.88
CCM2-207ENST00000475551 EPPK1P58107 5090 aaKnown RBP9.53□□□□□ -0.88
CCM2-207ENST00000475551 C20orf166-AS1Q96NR2 134 aa9.53□□□□□ -0.88
CCM2-207ENST00000475551 K7ERS5 55 aa9.51□□□□□ -0.89
CCM2-207ENST00000475551 VPS13BQ7Z7G8 4022 aa9.51□□□□□ -0.89
CCM2-207ENST00000475551 APOBP04114 4563 aaKnown RBP9.46□□□□□ -0.89
CCM2-207ENST00000475551 COX6B2Q6YFQ2 88 aa9.45□□□□□ -0.9
CCM2-207ENST00000475551 C9orf92A6NGG3 77 aa9.42□□□□□ -0.9
CCM2-207ENST00000475551 SMR3BP02814 79 aaPredicted RBP9.4□□□□□ -0.9
CCM2-207ENST00000475551 CRIPTQ9P021 101 aa9.4□□□□□ -0.9
CCM2-207ENST00000475551 A0A0A0MQY5 61 aa9.39□□□□□ -0.91
CCM2-207ENST00000475551 HSPG2P98160 4391 aa9.33□□□□□ -0.92
CCM2-207ENST00000475551 P0C880 135 aa9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 544 ms