RNA–Protein interactions for RNA: ENST00000474888.1

SNRPCP3-201, Transcript of small nuclear ribonucleoprotein polypeptide C pseudogene 3, humanhuman

BASIC

Gene SNRPCP3, Length 476 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPCP3-201ENST00000474888 MAP1AP78559 2803 aaPredicted RBP2.99□□□□□ -1.93
SNRPCP3-201ENST00000474888 LAMA5O15230 3695 aa2.99□□□□□ -1.93
SNRPCP3-201ENST00000474888 TACC2O95359 2948 aa2.99□□□□□ -1.93
SNRPCP3-201ENST00000474888 INE1O15225 51 aa2.99□□□□□ -1.93
SNRPCP3-201ENST00000474888 CELSR2Q9HCU4 2923 aa2.98□□□□□ -1.93
SNRPCP3-201ENST00000474888 CSPG4Q6UVK1 2322 aa2.98□□□□□ -1.93
SNRPCP3-201ENST00000474888 NOTCH2Q04721 2471 aa2.98□□□□□ -1.93
SNRPCP3-201ENST00000474888 OTOGQ6ZRI0 2925 aa2.97□□□□□ -1.93
SNRPCP3-201ENST00000474888 KRTAP12-2P59991 146 aa2.97□□□□□ -1.93
SNRPCP3-201ENST00000474888 DNHD1Q96M86 4753 aa2.96□□□□□ -1.94
SNRPCP3-201ENST00000474888 KRTAP12-1P59990 96 aa2.96□□□□□ -1.94
SNRPCP3-201ENST00000474888 SETD2Q9BYW2 2564 aaPredicted RBP2.96□□□□□ -1.94
SNRPCP3-201ENST00000474888 COL12A1Q99715 3063 aa2.95□□□□□ -1.94
SNRPCP3-201ENST00000474888 LOC100996750A0A140TA64 210 aa2.95□□□□□ -1.94
SNRPCP3-201ENST00000474888 KRTAP4-6Q9BYQ5 205 aa2.95□□□□□ -1.94
SNRPCP3-201ENST00000474888 PP632Q6XCG6 107 aa2.94□□□□□ -1.94
SNRPCP3-201ENST00000474888 R4GN34 69 aa2.94□□□□□ -1.94
SNRPCP3-201ENST00000474888 PRRC2CQ9Y520 2896 aaKnown RBP2.93□□□□□ -1.94
SNRPCP3-201ENST00000474888 DCHS2Q6V1P9 2916 aa2.92□□□□□ -1.94
SNRPCP3-201ENST00000474888 KRTAP1-3Q8IUG1 177 aa2.92□□□□□ -1.94
SNRPCP3-201ENST00000474888 KRTAP17-1Q9BYP8 105 aa2.92□□□□□ -1.94
SNRPCP3-201ENST00000474888 KRTAP1-5Q9BYS1 174 aa2.92□□□□□ -1.94
SNRPCP3-201ENST00000474888 M0QZ58 72 aa2.91□□□□□ -1.94
SNRPCP3-201ENST00000474888 HRNRQ86YZ3 2850 aaPredicted RBP2.9□□□□□ -1.94
SNRPCP3-201ENST00000474888 F8P00451 2351 aa2.9□□□□□ -1.94
SNRPCP3-201ENST00000474888 TLN1Q9Y490 2541 aaKnown RBP2.89□□□□□ -1.95
SNRPCP3-201ENST00000474888 RPS29P62273 56 aaKnown RBP2.89□□□□□ -1.95
SNRPCP3-201ENST00000474888 KRTAP13-2Q52LG2 175 aa2.89□□□□□ -1.95
SNRPCP3-201ENST00000474888 CELSR1Q9NYQ6 3014 aa2.89□□□□□ -1.95
SNRPCP3-201ENST00000474888 ATMQ13315 3056 aa2.87□□□□□ -1.95
SNRPCP3-201ENST00000474888 LRRK2Q5S007 2527 aa2.87□□□□□ -1.95
SNRPCP3-201ENST00000474888 FN1P02751 2386 aaKnown RBP2.87□□□□□ -1.95
SNRPCP3-201ENST00000474888 KRTAP23-1A1A580 65 aa2.87□□□□□ -1.95
SNRPCP3-201ENST00000474888 ITPR2Q14571 2701 aa2.87□□□□□ -1.95
SNRPCP3-201ENST00000474888 HIVEP2P31629 2446 aa2.87□□□□□ -1.95
SNRPCP3-201ENST00000474888 ADGRG4Q8IZF6 3080 aa2.87□□□□□ -1.95
SNRPCP3-201ENST00000474888 LRBAP50851 2863 aa2.86□□□□□ -1.95
SNRPCP3-201ENST00000474888 NF1P21359 2839 aa2.86□□□□□ -1.95
SNRPCP3-201ENST00000474888 SPRR5A0A1B0GTR4 108 aa2.86□□□□□ -1.95
SNRPCP3-201ENST00000474888 KRTAP1-1Q07627 177 aa2.86□□□□□ -1.95
SNRPCP3-201ENST00000474888 KRTAP10-11P60412 298 aa2.85□□□□□ -1.95
SNRPCP3-201ENST00000474888 DNAH1Q9P2D7 4330 aa2.85□□□□□ -1.95
SNRPCP3-201ENST00000474888 USP9YO00507 2555 aaPredicted RBP2.85□□□□□ -1.95
SNRPCP3-201ENST00000474888 KRTAP10-9P60411 292 aa2.84□□□□□ -1.95
SNRPCP3-201ENST00000474888 UTP20O75691 2785 aaKnown RBP2.84□□□□□ -1.95
SNRPCP3-201ENST00000474888 HIVEP3Q5T1R4 2406 aa2.84□□□□□ -1.95
SNRPCP3-201ENST00000474888 KRTAP10-8P60410 259 aa2.83□□□□□ -1.96
SNRPCP3-201ENST00000474888 NBEAL1Q6ZS30 2694 aa2.82□□□□□ -1.96
SNRPCP3-201ENST00000474888 FLNCQ14315 2725 aa2.82□□□□□ -1.96
SNRPCP3-201ENST00000474888 FBN1P35555 2871 aaKnown RBP2.82□□□□□ -1.96
SNRPCP3-201ENST00000474888 VPS13DQ5THJ4 4388 aa2.81□□□□□ -1.96
SNRPCP3-201ENST00000474888 MTORP42345 2549 aa2.81□□□□□ -1.96
SNRPCP3-201ENST00000474888 APCP25054 2843 aa2.81□□□□□ -1.96
SNRPCP3-201ENST00000474888 TLN2Q9Y4G6 2542 aa2.8□□□□□ -1.96
SNRPCP3-201ENST00000474888 BSNQ9UPA5 3926 aa2.8□□□□□ -1.96
SNRPCP3-201ENST00000474888 HIVEP1P15822 2718 aa2.8□□□□□ -1.96
SNRPCP3-201ENST00000474888 ATRQ13535 2644 aa2.8□□□□□ -1.96
SNRPCP3-201ENST00000474888 SVEP1Q4LDE5 3571 aa2.77□□□□□ -1.97
SNRPCP3-201ENST00000474888 KRTAP1-4P0C5Y4 121 aa2.77□□□□□ -1.97
SNRPCP3-201ENST00000474888 ANK3Q12955 4377 aaKnown RBP2.77□□□□□ -1.97
SNRPCP3-201ENST00000474888 SONP18583 2426 aaKnown RBP2.77□□□□□ -1.97
SNRPCP3-201ENST00000474888 CENPEQ02224 2701 aa2.76□□□□□ -1.97
SNRPCP3-201ENST00000474888 LCE2BO14633 110 aa2.75□□□□□ -1.97
SNRPCP3-201ENST00000474888 PDZD2O15018 2839 aa2.75□□□□□ -1.97
SNRPCP3-201ENST00000474888 STAB1Q9NY15 2570 aa2.75□□□□□ -1.97
SNRPCP3-201ENST00000474888 JMJD1CQ15652 2540 aa2.75□□□□□ -1.97
SNRPCP3-201ENST00000474888 FRAS1Q86XX4 4008 aa2.72□□□□□ -1.97
SNRPCP3-201ENST00000474888 C9orf92A6NGG3 77 aa2.72□□□□□ -1.97
SNRPCP3-201ENST00000474888 NOTCH1P46531 2555 aa2.72□□□□□ -1.97
SNRPCP3-201ENST00000474888 NIPBLQ6KC79 2804 aaeCLIP2.72□□□□□ -1.97
SNRPCP3-201ENST00000474888 CRYBG3Q68DQ2 2970 aa2.71□□□□□ -1.98
SNRPCP3-201ENST00000474888 Q5VSD8 79 aa2.71□□□□□ -1.98
SNRPCP3-201ENST00000474888 CCDC168Q8NDH2 2452 aa2.71□□□□□ -1.98
SNRPCP3-201ENST00000474888 COL6A5A8TX70 2615 aa2.7□□□□□ -1.98
SNRPCP3-201ENST00000474888 SMR3AQ99954 134 aa2.7□□□□□ -1.98
SNRPCP3-201ENST00000474888 FLNAP21333 2647 aaKnown RBP2.7□□□□□ -1.98
SNRPCP3-201ENST00000474888 CSMD2Q7Z408 3487 aa2.69□□□□□ -1.98
SNRPCP3-201ENST00000474888 NBEAL2Q6ZNJ1 2754 aa2.69□□□□□ -1.98
SNRPCP3-201ENST00000474888 ACANP16112 2415 aa2.69□□□□□ -1.98
SNRPCP3-201ENST00000474888 PKD1L1Q8TDX9 2849 aa2.69□□□□□ -1.98
SNRPCP3-201ENST00000474888 VPS13CQ709C8 3753 aa2.68□□□□□ -1.98
SNRPCP3-201ENST00000474888 SRRM2Q9UQ35 2752 aaKnown RBP2.66□□□□□ -1.98
SNRPCP3-201ENST00000474888 DNAH8Q96JB1 4490 aa2.66□□□□□ -1.98
SNRPCP3-201ENST00000474888 TRRAPQ9Y4A5 3859 aa2.65□□□□□ -1.99
SNRPCP3-201ENST00000474888 RYR3Q15413 4870 aa2.64□□□□□ -1.99
SNRPCP3-201ENST00000474888 ZNF469Q96JG9 3925 aaPredicted RBP2.64□□□□□ -1.99
SNRPCP3-201ENST00000474888 MEGF8Q7Z7M0 2845 aa2.64□□□□□ -1.99
SNRPCP3-201ENST00000474888 TGP01266 2768 aa2.64□□□□□ -1.99
SNRPCP3-201ENST00000474888 BIRC6Q9NR09 4857 aa2.63□□□□□ -1.99
SNRPCP3-201ENST00000474888 CUBNO60494 3623 aa2.63□□□□□ -1.99
SNRPCP3-201ENST00000474888 LCE2AQ5TA79 106 aaPredicted RBP2.63□□□□□ -1.99
SNRPCP3-201ENST00000474888 VWFP04275 2813 aa2.62□□□□□ -1.99
SNRPCP3-201ENST00000474888 ANK2Q01484 3957 aa2.62□□□□□ -1.99
SNRPCP3-201ENST00000474888 LCE2CQ5TA81 110 aa2.61□□□□□ -1.99
SNRPCP3-201ENST00000474888 MXRA5Q9NR99 2828 aa2.6□□□□□ -1.99
SNRPCP3-201ENST00000474888 KMT2CQ8NEZ4 4911 aaKnown RBP2.6□□□□□ -1.99
SNRPCP3-201ENST00000474888 CSMD3Q7Z407 3707 aa2.59□□□□□ -1.99
SNRPCP3-201ENST00000474888 TNP1P09430 55 aa2.59□□□□□ -1.99
SNRPCP3-201ENST00000474888 DYNC2H1Q8NCM8 4307 aaKnown RBP2.59□□□□□ -2
SNRPCP3-201ENST00000474888 DNAH3Q8TD57 4116 aa2.59□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms