RNA–Protein interactions for RNA: ENST00000474888.1

SNRPCP3-201, Transcript of small nuclear ribonucleoprotein polypeptide C pseudogene 3, humanhuman

BASIC

Gene SNRPCP3, Length 476 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPCP3-201ENST00000474888 PELP1Q8IZL8 1130 aaKnown RBP10.76□□□□□ -0.69
SNRPCP3-201ENST00000474888 MYT1Q01538 1121 aa10.67□□□□□ -0.7
SNRPCP3-201ENST00000474888 TTBK1Q5TCY1 1321 aaPredicted RBP10.27□□□□□ -0.77
SNRPCP3-201ENST00000474888 HRCP23327 699 aa9.85□□□□□ -0.83
SNRPCP3-201ENST00000474888 ERICH6Q7L0X2 663 aa9.69□□□□□ -0.86
SNRPCP3-201ENST00000474888 PRKCSHP14314 528 aaPredicted RBP9.59□□□□□ -0.87
SNRPCP3-201ENST00000474888 APLP2Q06481 763 aa9.55□□□□□ -0.88
SNRPCP3-201ENST00000474888 SCAF1Q9H7N4 1312 aaKnown RBP9.55□□□□□ -0.88
SNRPCP3-201ENST00000474888 BCL11AQ9H165 835 aa9.46□□□□□ -0.9
SNRPCP3-201ENST00000474888 SLC24A1O60721 1099 aa9.44□□□□□ -0.9
SNRPCP3-201ENST00000474888 CENPBP07199 599 aaPredicted RBP9.36□□□□□ -0.91
SNRPCP3-201ENST00000474888 PPARGC1BQ86YN6 1023 aaKnown RBP9.31□□□□□ -0.92
SNRPCP3-201ENST00000474888 FAM9AQ8IZU1 332 aaPredicted RBP9.29□□□□□ -0.92
SNRPCP3-201ENST00000474888 ACIN1Q9UKV3 1341 aaKnown RBP9.25□□□□□ -0.93
SNRPCP3-201ENST00000474888 ZEB1P37275 1124 aaPredicted RBP9.23□□□□□ -0.93
SNRPCP3-201ENST00000474888 DAXXQ9UER7 740 aaPredicted RBP9.16□□□□□ -0.94
SNRPCP3-201ENST00000474888 PCGF6Q9BYE7 350 aa9.14□□□□□ -0.95
SNRPCP3-201ENST00000474888 ANP32EQ9BTT0 268 aa9.12□□□□□ -0.95
SNRPCP3-201ENST00000474888 GTF3C3Q9Y5Q9 886 aa9.1□□□□□ -0.95
SNRPCP3-201ENST00000474888 NEUROD1Q13562 356 aa9.05□□□□□ -0.96
SNRPCP3-201ENST00000474888 DCAF1Q9Y4B6 1507 aa8.95□□□□□ -0.98
SNRPCP3-201ENST00000474888 EIF5BO60841 1220 aaKnown RBP8.95□□□□□ -0.98
SNRPCP3-201ENST00000474888 CCDC180Q9P1Z9 1646 aa8.91□□□□□ -0.98
SNRPCP3-201ENST00000474888 TRIM26Q12899 539 aaPredicted RBP8.9□□□□□ -0.98
SNRPCP3-201ENST00000474888 CSRNP3Q8WYN3 585 aa8.9□□□□□ -0.98
SNRPCP3-201ENST00000474888 UBE2Q2Q8WVN8 375 aa8.89□□□□□ -0.99
SNRPCP3-201ENST00000474888 CLSPNQ9HAW4 1339 aa8.85□□□□□ -0.99
SNRPCP3-201ENST00000474888 MYO15BQ96JP2 1530 aa8.82□□□□□ -1
SNRPCP3-201ENST00000474888 NISCHQ9Y2I1 1504 aa8.82□□□□□ -1
SNRPCP3-201ENST00000474888 MYT1LQ9UL68 1186 aa8.82□□□□□ -1
SNRPCP3-201ENST00000474888 ERICH6BQ5W0A0 696 aa8.76□□□□□ -1.01
SNRPCP3-201ENST00000474888 ANO8Q9HCE9 1232 aaPredicted RBP8.71□□□□□ -1.02
SNRPCP3-201ENST00000474888 DIEXFQ68CQ4 756 aaKnown RBP8.69□□□□□ -1.02
SNRPCP3-201ENST00000474888 TSHZ2Q9NRE2 1034 aa8.69□□□□□ -1.02
SNRPCP3-201ENST00000474888 PKNOX2Q96KN3 472 aa8.61□□□□□ -1.03
SNRPCP3-201ENST00000474888 PODXL2Q9NZ53 605 aa8.6□□□□□ -1.03
SNRPCP3-201ENST00000474888 CHIC1Q5VXU3 224 aa8.59□□□□□ -1.03
SNRPCP3-201ENST00000474888 PLEKHG5O94827 1062 aa8.55□□□□□ -1.04
SNRPCP3-201ENST00000474888 SUPT16HQ9Y5B9 1047 aaKnown RBP8.54□□□□□ -1.04
SNRPCP3-201ENST00000474888 TRIM41Q8WV44 630 aa8.53□□□□□ -1.04
SNRPCP3-201ENST00000474888 SALL2Q9Y467 1007 aaPredicted RBP8.53□□□□□ -1.04
SNRPCP3-201ENST00000474888 NEFLP07196 543 aa8.49□□□□□ -1.05
SNRPCP3-201ENST00000474888 DEKP35659 375 aaKnown RBP8.48□□□□□ -1.05
SNRPCP3-201ENST00000474888 ZNF316A6NFI3 1004 aaPredicted RBP8.44□□□□□ -1.06
SNRPCP3-201ENST00000474888 RBM19Q9Y4C8 960 aaKnown RBP8.44□□□□□ -1.06
SNRPCP3-201ENST00000474888 FANCIQ9NVI1 1328 aa8.44□□□□□ -1.06
SNRPCP3-201ENST00000474888 RANGAP1P46060 587 aaPredicted RBP8.43□□□□□ -1.06
SNRPCP3-201ENST00000474888 GLIPR1L2Q4G1C9 344 aa8.43□□□□□ -1.06
SNRPCP3-201ENST00000474888 YTHDC1Q96MU7 727 aaKnown RBP8.41□□□□□ -1.06
SNRPCP3-201ENST00000474888 CCER1Q8TC90 406 aaPredicted RBP8.4□□□□□ -1.06
SNRPCP3-201ENST00000474888 CCDC136Q96JN2 1154 aa8.39□□□□□ -1.07
SNRPCP3-201ENST00000474888 MSH5O43196 834 aa8.36□□□□□ -1.07
SNRPCP3-201ENST00000474888 NCBP3Q53F19 620 aaKnown RBP8.36□□□□□ -1.07
SNRPCP3-201ENST00000474888 MIER1Q8N108 512 aa8.34□□□□□ -1.07
SNRPCP3-201ENST00000474888 ARXQ96QS3 562 aa8.34□□□□□ -1.07
SNRPCP3-201ENST00000474888 SUPT5HO00267 1087 aaKnown RBP8.33□□□□□ -1.08
SNRPCP3-201ENST00000474888 PDE4CQ08493 712 aa8.31□□□□□ -1.08
SNRPCP3-201ENST00000474888 LOC105371045A0A1W2PR82 267 aa8.3□□□□□ -1.08
SNRPCP3-201ENST00000474888 PDIA4P13667 645 aaKnown RBP8.29□□□□□ -1.08
SNRPCP3-201ENST00000474888 RSPH6AQ9H0K4 717 aa8.28□□□□□ -1.08
SNRPCP3-201ENST00000474888 ZBTB4Q9P1Z0 1013 aaPredicted RBP8.28□□□□□ -1.08
SNRPCP3-201ENST00000474888 FGD1P98174 961 aa8.27□□□□□ -1.09
SNRPCP3-201ENST00000474888 ZMYND15Q9H091 742 aa8.25□□□□□ -1.09
SNRPCP3-201ENST00000474888 C11orf95C9JLR9 678 aaPredicted RBP8.24□□□□□ -1.09
SNRPCP3-201ENST00000474888 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP8.22□□□□□ -1.09
SNRPCP3-201ENST00000474888 IL27Q8NEV9 243 aa8.2□□□□□ -1.1
SNRPCP3-201ENST00000474888 AAMPQ13685 434 aa8.19□□□□□ -1.1
SNRPCP3-201ENST00000474888 TAF7LQ5H9L4 462 aa8.19□□□□□ -1.1
SNRPCP3-201ENST00000474888 RTL5Q5HYW3 569 aaPredicted RBP8.18□□□□□ -1.1
SNRPCP3-201ENST00000474888 VSIG10Q8N0Z9 540 aa8.17□□□□□ -1.1
SNRPCP3-201ENST00000474888 CDK11AQ9UQ88 783 aaPredicted RBP8.17□□□□□ -1.1
SNRPCP3-201ENST00000474888 RBM10P98175 930 aaKnown RBP8.15□□□□□ -1.1
SNRPCP3-201ENST00000474888 FKBP8Q14318 412 aa8.15□□□□□ -1.1
SNRPCP3-201ENST00000474888 NOP58Q9Y2X3 529 aaKnown RBP8.15□□□□□ -1.1
SNRPCP3-201ENST00000474888 ZNF326Q5BKZ1 582 aaKnown RBP8.13□□□□□ -1.11
SNRPCP3-201ENST00000474888 KLHL34Q8N239 644 aa8.13□□□□□ -1.11
SNRPCP3-201ENST00000474888 WASHC2CQ9Y4E1 1318 aa8.12□□□□□ -1.11
SNRPCP3-201ENST00000474888 RTN4Q9NQC3 1192 aaKnown RBP8.12□□□□□ -1.11
SNRPCP3-201ENST00000474888 USP35Q9P2H5 1018 aa8.12□□□□□ -1.11
SNRPCP3-201ENST00000474888 WASHC2AQ641Q2 1341 aa8.11□□□□□ -1.11
SNRPCP3-201ENST00000474888 BCL11BQ9C0K0 894 aaPredicted RBP8.1□□□□□ -1.11
SNRPCP3-201ENST00000474888 RRP9O43818 475 aaKnown RBP8.08□□□□□ -1.12
SNRPCP3-201ENST00000474888 BCANQ96GW7 911 aa8.08□□□□□ -1.12
SNRPCP3-201ENST00000474888 A0A0U1RQG5 324 aaPredicted RBP8.07□□□□□ -1.12
SNRPCP3-201ENST00000474888 FAM43AQ8N2R8 423 aa8.07□□□□□ -1.12
SNRPCP3-201ENST00000474888 NBR1Q14596 966 aa8.06□□□□□ -1.12
SNRPCP3-201ENST00000474888 TIMELESSQ9UNS1 1208 aa8.03□□□□□ -1.12
SNRPCP3-201ENST00000474888 HSP90AA2PQ14568 343 aaPredicted RBP8.02□□□□□ -1.13
SNRPCP3-201ENST00000474888 RSPH4AQ5TD94 716 aa8.02□□□□□ -1.13
SNRPCP3-201ENST00000474888 HOMEZQ8IX15 550 aa8.02□□□□□ -1.13
SNRPCP3-201ENST00000474888 SHROOM4Q9ULL8 1493 aa8.01□□□□□ -1.13
SNRPCP3-201ENST00000474888 IPO9Q96P70 1041 aaKnown RBP7.99□□□□□ -1.13
SNRPCP3-201ENST00000474888 ZBTB47Q9UFB7 747 aaPredicted RBP7.99□□□□□ -1.13
SNRPCP3-201ENST00000474888 CENPJQ9HC77 1338 aaPredicted RBP7.98□□□□□ -1.13
SNRPCP3-201ENST00000474888 PPM1GO15355 546 aaPredicted RBP7.97□□□□□ -1.13
SNRPCP3-201ENST00000474888 BRD2P25440 801 aaKnown RBP7.97□□□□□ -1.13
SNRPCP3-201ENST00000474888 ITGAEP38570 1179 aa7.97□□□□□ -1.13
SNRPCP3-201ENST00000474888 CALD1Q05682 793 aaKnown RBP7.97□□□□□ -1.13
SNRPCP3-201ENST00000474888 HSP90AA1P07900 732 aaKnown RBP7.96□□□□□ -1.14
SNRPCP3-201ENST00000474888 PAK3O75914 559 aaPredicted RBP7.95□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 92 ms