RNA–Protein interactions for RNA: ENST00000472413.5

NPIPA1-203, Transcript of nuclear pore complex interacting protein family member A1, humanhuman

TSL 2

Gene NPIPA1, Length 5,345 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA1-203ENST00000472413 ADM2Q7Z4H4 148 aa9.02□□□□□ -0.97
NPIPA1-203ENST00000472413 COL6A3P12111 3177 aa9□□□□□ -0.97
NPIPA1-203ENST00000472413 A0A0A0MQY5 61 aa8.99□□□□□ -0.97
NPIPA1-203ENST00000472413 APCP25054 2843 aa8.98□□□□□ -0.97
NPIPA1-203ENST00000472413 LRBAP50851 2863 aa8.97□□□□□ -0.97
NPIPA1-203ENST00000472413 ZZEF1O43149 2961 aa8.97□□□□□ -0.97
NPIPA1-203ENST00000472413 ROMO1P60602 79 aa8.96□□□□□ -0.98
NPIPA1-203ENST00000472413 NIPBLQ6KC79 2804 aaeCLIP8.96□□□□□ -0.98
NPIPA1-203ENST00000472413 ASH1LQ9NR48 2969 aaKnown RBP8.96□□□□□ -0.98
NPIPA1-203ENST00000472413 CFAP47Q6ZTR5 3102 aa8.95□□□□□ -0.98
NPIPA1-203ENST00000472413 SPEGQ15772 3267 aa8.93□□□□□ -0.98
NPIPA1-203ENST00000472413 REV3LO60673 3130 aa8.89□□□□□ -0.99
NPIPA1-203ENST00000472413 EYSQ5T1H1 3165 aa8.87□□□□□ -0.99
NPIPA1-203ENST00000472413 SPATA8Q6RVD6 105 aa8.85□□□□□ -0.99
NPIPA1-203ENST00000472413 ZANQ9Y493 2812 aa8.83□□□□□ -1
NPIPA1-203ENST00000472413 A8MUU9 505 aa8.81□□□□□ -1
NPIPA1-203ENST00000472413 C20orf166-AS1Q96NR2 134 aa8.8□□□□□ -1
NPIPA1-203ENST00000472413 CELSR2Q9HCU4 2923 aa8.8□□□□□ -1
NPIPA1-203ENST00000472413 A6NN06 94 aa8.79□□□□□ -1
NPIPA1-203ENST00000472413 TNRC18O15417 2968 aaPredicted RBP8.79□□□□□ -1
NPIPA1-203ENST00000472413 KRTAP16-1A8MUX0 517 aa8.73□□□□□ -1.01
NPIPA1-203ENST00000472413 DMXL1Q9Y485 3027 aa8.71□□□□□ -1.01
NPIPA1-203ENST00000472413 CRYBG3Q68DQ2 2970 aa8.71□□□□□ -1.01
NPIPA1-203ENST00000472413 KRTAP1-4P0C5Y4 121 aa8.71□□□□□ -1.02
NPIPA1-203ENST00000472413 LOC400499M0QZD8 3231 aa8.7□□□□□ -1.02
NPIPA1-203ENST00000472413 SPTBN5Q9NRC6 3674 aaKnown RBP8.66□□□□□ -1.02
NPIPA1-203ENST00000472413 DCHS2Q6V1P9 2916 aa8.65□□□□□ -1.03
NPIPA1-203ENST00000472413 NF1P21359 2839 aa8.65□□□□□ -1.03
NPIPA1-203ENST00000472413 XP32Q5T750 250 aa8.61□□□□□ -1.03
NPIPA1-203ENST00000472413 TPRXLQ17RH7 258 aa8.59□□□□□ -1.03
NPIPA1-203ENST00000472413 FBN2P35556 2912 aa8.58□□□□□ -1.04
NPIPA1-203ENST00000472413 KRTAP25-1Q3LHN0 102 aa8.58□□□□□ -1.04
NPIPA1-203ENST00000472413 USP34Q70CQ2 3546 aa8.57□□□□□ -1.04
NPIPA1-203ENST00000472413 HRNRQ86YZ3 2850 aaPredicted RBP8.56□□□□□ -1.04
NPIPA1-203ENST00000472413 A8MU10 97 aa8.55□□□□□ -1.04
NPIPA1-203ENST00000472413 MYO15AQ9UKN7 3530 aa8.5□□□□□ -1.05
NPIPA1-203ENST00000472413 TNP1P09430 55 aa8.47□□□□□ -1.05
NPIPA1-203ENST00000472413 TENM3Q9P273 2699 aa8.42□□□□□ -1.06
NPIPA1-203ENST00000472413 A0A1B0GVY2 172 aa8.41□□□□□ -1.06
NPIPA1-203ENST00000472413 TENM1Q9UKZ4 2725 aa8.4□□□□□ -1.06
NPIPA1-203ENST00000472413 KRTAP13-3Q3SY46 172 aa8.38□□□□□ -1.07
NPIPA1-203ENST00000472413 MXRA5Q9NR99 2828 aa8.37□□□□□ -1.07
NPIPA1-203ENST00000472413 TENM2Q9NT68 2774 aa8.36□□□□□ -1.07
NPIPA1-203ENST00000472413 KRTAP10-8P60410 259 aa8.32□□□□□ -1.08
NPIPA1-203ENST00000472413 NDUFAF8A1L188 74 aa8.26□□□□□ -1.09
NPIPA1-203ENST00000472413 RELNP78509 3460 aa8.24□□□□□ -1.09
NPIPA1-203ENST00000472413 PP632Q6XCG6 107 aa8.24□□□□□ -1.09
NPIPA1-203ENST00000472413 DCHS1Q96JQ0 3298 aa8.24□□□□□ -1.09
NPIPA1-203ENST00000472413 WDFY3Q8IZQ1 3526 aa8.23□□□□□ -1.09
NPIPA1-203ENST00000472413 KRTAP10-10P60014 251 aa8.22□□□□□ -1.09
NPIPA1-203ENST00000472413 CELSR1Q9NYQ6 3014 aa8.18□□□□□ -1.1
NPIPA1-203ENST00000472413 PRO2289Q9P1D8 64 aa8.16□□□□□ -1.1
NPIPA1-203ENST00000472413 PDZD2O15018 2839 aa8.12□□□□□ -1.11
NPIPA1-203ENST00000472413 H0YAA0 97 aa8.11□□□□□ -1.11
NPIPA1-203ENST00000472413 PKD1L1Q8TDX9 2849 aa8.07□□□□□ -1.12
NPIPA1-203ENST00000472413 LAMA5O15230 3695 aa8.07□□□□□ -1.12
NPIPA1-203ENST00000472413 ASPMQ8IZT6 3477 aa8.06□□□□□ -1.12
NPIPA1-203ENST00000472413 C10orf95Q9H7T3 257 aa8.02□□□□□ -1.13
NPIPA1-203ENST00000472413 MUC3AQ02505 3323 aa8.02□□□□□ -1.13
NPIPA1-203ENST00000472413 ZFHX4Q86UP3 3567 aa8□□□□□ -1.13
NPIPA1-203ENST00000472413 P0C880 135 aa7.98□□□□□ -1.13
NPIPA1-203ENST00000472413 TGP01266 2768 aa7.97□□□□□ -1.13
NPIPA1-203ENST00000472413 OTOGQ6ZRI0 2925 aa7.93□□□□□ -1.14
NPIPA1-203ENST00000472413 FBN1P35555 2871 aaKnown RBP7.91□□□□□ -1.14
NPIPA1-203ENST00000472413 VWFP04275 2813 aa7.89□□□□□ -1.15
NPIPA1-203ENST00000472413 DMDP11532 3685 aa7.85□□□□□ -1.15
NPIPA1-203ENST00000472413 CSMD1Q96PZ7 3565 aa7.81□□□□□ -1.16
NPIPA1-203ENST00000472413 SMG1Q96Q15 3661 aaKnown RBP7.77□□□□□ -1.17
NPIPA1-203ENST00000472413 NBPF19A0A087WUL8 3843 aa7.68□□□□□ -1.18
NPIPA1-203ENST00000472413 CUBNO60494 3623 aa7.65□□□□□ -1.19
NPIPA1-203ENST00000472413 SVEP1Q4LDE5 3571 aa7.64□□□□□ -1.19
NPIPA1-203ENST00000472413 SRRM2Q9UQ35 2752 aaKnown RBP7.63□□□□□ -1.19
NPIPA1-203ENST00000472413 ANK3Q12955 4377 aaKnown RBP7.62□□□□□ -1.19
NPIPA1-203ENST00000472413 MT1HL1P0DM35 61 aa7.61□□□□□ -1.19
NPIPA1-203ENST00000472413 KRTAP3-1Q9BYR8 98 aa7.61□□□□□ -1.19
NPIPA1-203ENST00000472413 KRTAP12-2P59991 146 aa7.6□□□□□ -1.19
NPIPA1-203ENST00000472413 KRTAP13-4Q3LI77 160 aa7.6□□□□□ -1.19
NPIPA1-203ENST00000472413 ZFHX3Q15911 3703 aa7.59□□□□□ -1.19
NPIPA1-203ENST00000472413 KRTAP12-1P59990 96 aa7.54□□□□□ -1.2
NPIPA1-203ENST00000472413 FBN3Q75N90 2809 aa7.49□□□□□ -1.21
NPIPA1-203ENST00000472413 CSMD2Q7Z408 3487 aa7.47□□□□□ -1.21
NPIPA1-203ENST00000472413 KRTAP10-4P60372 401 aaPredicted RBP7.42□□□□□ -1.22
NPIPA1-203ENST00000472413 SPENQ96T58 3664 aaKnown RBP7.4□□□□□ -1.22
NPIPA1-203ENST00000472413 MEGF8Q7Z7M0 2845 aa7.4□□□□□ -1.22
NPIPA1-203ENST00000472413 KRTAP10-6P60371 365 aaPredicted RBP7.37□□□□□ -1.23
NPIPA1-203ENST00000472413 KRTAP4-5Q9BYR2 181 aa7.32□□□□□ -1.24
NPIPA1-203ENST00000472413 COL7A1Q02388 2944 aa7.31□□□□□ -1.24
NPIPA1-203ENST00000472413 TRRAPQ9Y4A5 3859 aa7.3□□□□□ -1.24
NPIPA1-203ENST00000472413 KRTAP15-1Q3LI76 137 aa7.23□□□□□ -1.25
NPIPA1-203ENST00000472413 HUWE1Q7Z6Z7 4374 aaKnown RBP7.17□□□□□ -1.26
NPIPA1-203ENST00000472413 BSNQ9UPA5 3926 aa7.15□□□□□ -1.26
NPIPA1-203ENST00000472413 KRTAP3-3Q9BYR6 98 aa7.15□□□□□ -1.26
NPIPA1-203ENST00000472413 ALMS1Q8TCU4 4167 aa7.15□□□□□ -1.27
NPIPA1-203ENST00000472413 KRTAP3-2Q9BYR7 98 aa7.12□□□□□ -1.27
NPIPA1-203ENST00000472413 KRTAP10-12P60413 245 aa7.06□□□□□ -1.28
NPIPA1-203ENST00000472413 VPS13CQ709C8 3753 aa6.94□□□□□ -1.3
NPIPA1-203ENST00000472413 INE1O15225 51 aa6.92□□□□□ -1.3
NPIPA1-203ENST00000472413 KRTAP23-1A1A580 65 aa6.87□□□□□ -1.31
NPIPA1-203ENST00000472413 DNAH9Q9NYC9 4486 aa6.86□□□□□ -1.31
NPIPA1-203ENST00000472413 KRTAP12-3P60328 96 aa6.82□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 98.4 ms