RNA–Protein interactions for RNA: ENST00000472155.5

UBXN11-213, Transcript of UBX domain protein 11, humanhuman

TSL 1 (best)

Gene UBXN11, Length 2,646 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN11-213ENST00000472155 Q6ZSA8 131 aa8.83□□□□□ -1
UBXN11-213ENST00000472155 C8orf17Q9NRJ1 99 aa8.82□□□□□ -1
UBXN11-213ENST00000472155 DYNC1H1Q14204 4646 aaKnown RBP8.81□□□□□ -1
UBXN11-213ENST00000472155 TRAV22A0A0B4J277 110 aa8.8□□□□□ -1
UBXN11-213ENST00000472155 A0A1B0GVX0 72 aa8.8□□□□□ -1
UBXN11-213ENST00000472155 MP68P56378 58 aa8.8□□□□□ -1
UBXN11-213ENST00000472155 SEC61GP60059 68 aa8.79□□□□□ -1
UBXN11-213ENST00000472155 KRTAP13-2Q52LG2 175 aa8.79□□□□□ -1
UBXN11-213ENST00000472155 ASB16-AS1Q495Z4 193 aa8.79□□□□□ -1
UBXN11-213ENST00000472155 FAT1Q14517 4588 aa8.78□□□□□ -1
UBXN11-213ENST00000472155 C1orf64Q8NEQ6 169 aa8.77□□□□□ -1.01
UBXN11-213ENST00000472155 KMT2CQ8NEZ4 4911 aaKnown RBP8.75□□□□□ -1.01
UBXN11-213ENST00000472155 NDUFS5O43920 106 aa8.75□□□□□ -1.01
UBXN11-213ENST00000472155 CDK2AP2O75956 126 aa8.73□□□□□ -1.01
UBXN11-213ENST00000472155 C1orf195Q5TG92 126 aa8.72□□□□□ -1.01
UBXN11-213ENST00000472155 V9GYY9 64 aa8.72□□□□□ -1.01
UBXN11-213ENST00000472155 KRTAP1-4P0C5Y4 121 aa8.71□□□□□ -1.01
UBXN11-213ENST00000472155 KRTAP21-3Q3LHN1 58 aa8.7□□□□□ -1.02
UBXN11-213ENST00000472155 PCOTHQ58A44 107 aa8.7□□□□□ -1.02
UBXN11-213ENST00000472155 RYR2Q92736 4967 aa8.7□□□□□ -1.02
UBXN11-213ENST00000472155 MRPL34Q9BQ48 92 aaKnown RBP8.69□□□□□ -1.02
UBXN11-213ENST00000472155 SSBP3-AS1Q7Z2R9 100 aa8.69□□□□□ -1.02
UBXN11-213ENST00000472155 APOBP04114 4563 aaKnown RBP8.69□□□□□ -1.02
UBXN11-213ENST00000472155 Q5W150 140 aa8.67□□□□□ -1.02
UBXN11-213ENST00000472155 CYP4F30PQ9H0H9 118 aa8.67□□□□□ -1.02
UBXN11-213ENST00000472155 CD164Q04900 197 aa8.65□□□□□ -1.03
UBXN11-213ENST00000472155 SMR3BP02814 79 aaPredicted RBP8.64□□□□□ -1.03
UBXN11-213ENST00000472155 H3BPC8 53 aa8.64□□□□□ -1.03
UBXN11-213ENST00000472155 PSPHP1O15172 72 aa8.64□□□□□ -1.03
UBXN11-213ENST00000472155 TP53AIP1Q9HCN2 124 aa8.63□□□□□ -1.03
UBXN11-213ENST00000472155 PLA2G1BP04054 148 aaKnown RBP8.61□□□□□ -1.03
UBXN11-213ENST00000472155 RETNLBQ9BQ08 111 aa8.6□□□□□ -1.03
UBXN11-213ENST00000472155 SPANXA2-OT1Q8N9U9 137 aa8.58□□□□□ -1.04
UBXN11-213ENST00000472155 Q1T7F1 81 aa8.58□□□□□ -1.04
UBXN11-213ENST00000472155 KRTAP13-3Q3SY46 172 aa8.57□□□□□ -1.04
UBXN11-213ENST00000472155 PRR26Q8N8Z3 221 aa8.55□□□□□ -1.04
UBXN11-213ENST00000472155 IGLV7-46A0A075B6I9 117 aa8.54□□□□□ -1.04
UBXN11-213ENST00000472155 LINC00313P59037 77 aa8.54□□□□□ -1.04
UBXN11-213ENST00000472155 Q8N9P0 234 aaPredicted RBP8.53□□□□□ -1.04
UBXN11-213ENST00000472155 TYMSOSQ8TAI1 123 aa8.53□□□□□ -1.04
UBXN11-213ENST00000472155 A8MU10 97 aa8.53□□□□□ -1.04
UBXN11-213ENST00000472155 A8MUN3 132 aa8.52□□□□□ -1.05
UBXN11-213ENST00000472155 A0A1B0GVY2 172 aa8.51□□□□□ -1.05
UBXN11-213ENST00000472155 PKHD1L1Q86WI1 4243 aa8.51□□□□□ -1.05
UBXN11-213ENST00000472155 COA5Q86WW8 74 aa8.5□□□□□ -1.05
UBXN11-213ENST00000472155 KRTAP16-1A8MUX0 517 aa8.5□□□□□ -1.05
UBXN11-213ENST00000472155 RYR3Q15413 4870 aa8.49□□□□□ -1.05
UBXN11-213ENST00000472155 PMAIP1Q13794 54 aa8.49□□□□□ -1.05
UBXN11-213ENST00000472155 C8orf87E5RJ46 101 aa8.49□□□□□ -1.05
UBXN11-213ENST00000472155 LRP1Q07954 4544 aaKnown RBP8.46□□□□□ -1.06
UBXN11-213ENST00000472155 C4orf48Q5BLP8 95 aa8.45□□□□□ -1.06
UBXN11-213ENST00000472155 KRTAP10-4P60372 401 aaPredicted RBP8.44□□□□□ -1.06
UBXN11-213ENST00000472155 LIMD2Q9BT23 127 aa8.44□□□□□ -1.06
UBXN11-213ENST00000472155 LOC101927531A0A1B0GV80 90 aa8.43□□□□□ -1.06
UBXN11-213ENST00000472155 HRES1P13985 223 aa8.43□□□□□ -1.06
UBXN11-213ENST00000472155 Q5VV11 94 aa8.42□□□□□ -1.06
UBXN11-213ENST00000472155 SPINK1P00995 79 aa8.4□□□□□ -1.06
UBXN11-213ENST00000472155 LINC00304Q8N9R0 145 aa8.4□□□□□ -1.06
UBXN11-213ENST00000472155 HSPG2P98160 4391 aa8.38□□□□□ -1.07
UBXN11-213ENST00000472155 CHKB-CPT1BH3BT56 60 aa8.38□□□□□ -1.07
UBXN11-213ENST00000472155 FAM229AH3BQW9 127 aa8.37□□□□□ -1.07
UBXN11-213ENST00000472155 SPAG11AQ6PDA7 123 aa8.36□□□□□ -1.07
UBXN11-213ENST00000472155 PRR15LQ9BU68 103 aa8.36□□□□□ -1.07
UBXN11-213ENST00000472155 IGKV2-30P06310 120 aa8.34□□□□□ -1.07
UBXN11-213ENST00000472155 IGKV2D-30A0A075B6S6 120 aa8.34□□□□□ -1.07
UBXN11-213ENST00000472155 TNXBP22105 4242 aa8.32□□□□□ -1.08
UBXN11-213ENST00000472155 SPTSSBQ8NFR3 76 aa8.32□□□□□ -1.08
UBXN11-213ENST00000472155 C9orf92A6NGG3 77 aa8.32□□□□□ -1.08
UBXN11-213ENST00000472155 FLG2Q5D862 2391 aaPredicted RBP8.29□□□□□ -1.08
UBXN11-213ENST00000472155 LCA10Q71F78 164 aa8.28□□□□□ -1.08
UBXN11-213ENST00000472155 KIAA1109Q2LD37 5005 aa8.27□□□□□ -1.08
UBXN11-213ENST00000472155 MYCBP2O75592 4640 aa8.27□□□□□ -1.08
UBXN11-213ENST00000472155 RYR1P21817 5038 aa8.27□□□□□ -1.09
UBXN11-213ENST00000472155 FAT3Q8TDW7 4589 aa8.27□□□□□ -1.09
UBXN11-213ENST00000472155 A6NED7 52 aa8.26□□□□□ -1.09
UBXN11-213ENST00000472155 DMAC1Q96GE9 116 aa8.25□□□□□ -1.09
UBXN11-213ENST00000472155 KRTAP17-1Q9BYP8 105 aa8.25□□□□□ -1.09
UBXN11-213ENST00000472155 RPS29P62273 56 aaKnown RBP8.22□□□□□ -1.09
UBXN11-213ENST00000472155 ACYP2P14621 99 aa8.22□□□□□ -1.09
UBXN11-213ENST00000472155 DMBT1Q9UGM3 2413 aaPredicted RBP8.22□□□□□ -1.09
UBXN11-213ENST00000472155 Q75L30 129 aa8.21□□□□□ -1.1
UBXN11-213ENST00000472155 LINC01558Q9Y6Z2 57 aa8.21□□□□□ -1.1
UBXN11-213ENST00000472155 KTN1-AS1Q86SY8 53 aa8.19□□□□□ -1.1
UBXN11-213ENST00000472155 EPPK1P58107 5090 aaKnown RBP8.19□□□□□ -1.1
UBXN11-213ENST00000472155 Q8N1X5 172 aa8.18□□□□□ -1.1
UBXN11-213ENST00000472155 ATP11AUNQ6ZP68 121 aa8.17□□□□□ -1.1
UBXN11-213ENST00000472155 RBM12B-AS1Q9P1G2 102 aa8.16□□□□□ -1.1
UBXN11-213ENST00000472155 SPINK7P58062 85 aa8.15□□□□□ -1.11
UBXN11-213ENST00000472155 A6NN06 94 aa8.14□□□□□ -1.11
UBXN11-213ENST00000472155 C7orf65Q6ZTY9 151 aa8.14□□□□□ -1.11
UBXN11-213ENST00000472155 Q5VSD8 79 aa8.12□□□□□ -1.11
UBXN11-213ENST00000472155 CDC42SE1Q9NRR8 79 aa8.12□□□□□ -1.11
UBXN11-213ENST00000472155 A8MUU9 505 aa8.11□□□□□ -1.11
UBXN11-213ENST00000472155 C20orf166-AS1Q96NR2 134 aa8.11□□□□□ -1.11
UBXN11-213ENST00000472155 KRTAP10-8P60410 259 aa8.05□□□□□ -1.12
UBXN11-213ENST00000472155 KRTAP3-1Q9BYR8 98 aa8.02□□□□□ -1.12
UBXN11-213ENST00000472155 A0A1B0GU69 56 aa7.98□□□□□ -1.13
UBXN11-213ENST00000472155 LPAP08519 4548 aa7.97□□□□□ -1.13
UBXN11-213ENST00000472155 ABCA13Q86UQ4 5058 aa7.96□□□□□ -1.13
UBXN11-213ENST00000472155 LRP2P98164 4655 aa7.91□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 127.9 ms