RNA–Protein interactions for RNA: ENST00000465950.5

SCAF11-205, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 1 (best) BASIC

Gene SCAF11, Length 5,296 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-205ENST00000465950 RELNP78509 3460 aa4.84□□□□□ -1.64
SCAF11-205ENST00000465950 SPEGQ15772 3267 aa4.83□□□□□ -1.64
SCAF11-205ENST00000465950 HTTP42858 3142 aa4.82□□□□□ -1.64
SCAF11-205ENST00000465950 KTN1-AS1Q86SY8 53 aa4.82□□□□□ -1.64
SCAF11-205ENST00000465950 LAMA2P24043 3122 aaKnown RBP4.82□□□□□ -1.64
SCAF11-205ENST00000465950 A6NN06 94 aa4.82□□□□□ -1.64
SCAF11-205ENST00000465950 KRTAP25-1Q3LHN0 102 aa4.82□□□□□ -1.64
SCAF11-205ENST00000465950 TENM2Q9NT68 2774 aa4.82□□□□□ -1.64
SCAF11-205ENST00000465950 SPATA8Q6RVD6 105 aa4.78□□□□□ -1.64
SCAF11-205ENST00000465950 SMG1Q96Q15 3661 aaKnown RBP4.78□□□□□ -1.64
SCAF11-205ENST00000465950 CSMD1Q96PZ7 3565 aa4.77□□□□□ -1.65
SCAF11-205ENST00000465950 TENM3Q9P273 2699 aa4.77□□□□□ -1.65
SCAF11-205ENST00000465950 H0YAA0 97 aa4.76□□□□□ -1.65
SCAF11-205ENST00000465950 C5orf42Q9H799 3197 aa4.75□□□□□ -1.65
SCAF11-205ENST00000465950 TENM1Q9UKZ4 2725 aa4.73□□□□□ -1.65
SCAF11-205ENST00000465950 NBPF19A0A087WUL8 3843 aa4.73□□□□□ -1.65
SCAF11-205ENST00000465950 MKI67P46013 3256 aaKnown RBP4.73□□□□□ -1.65
SCAF11-205ENST00000465950 MT1HL1P0DM35 61 aa4.72□□□□□ -1.65
SCAF11-205ENST00000465950 COL6A3P12111 3177 aa4.71□□□□□ -1.66
SCAF11-205ENST00000465950 LAMA1P25391 3075 aa4.71□□□□□ -1.66
SCAF11-205ENST00000465950 KRTAP16-1A8MUX0 517 aa4.71□□□□□ -1.66
SCAF11-205ENST00000465950 FRYQ5TBA9 3013 aa4.7□□□□□ -1.66
SCAF11-205ENST00000465950 CFAP54Q96N23 3096 aa4.7□□□□□ -1.66
SCAF11-205ENST00000465950 FBN3Q75N90 2809 aa4.69□□□□□ -1.66
SCAF11-205ENST00000465950 NBEAL2Q6ZNJ1 2754 aa4.69□□□□□ -1.66
SCAF11-205ENST00000465950 RANBP2P49792 3224 aaKnown RBP4.65□□□□□ -1.66
SCAF11-205ENST00000465950 MXRA5Q9NR99 2828 aa4.63□□□□□ -1.67
SCAF11-205ENST00000465950 CRYBG3Q68DQ2 2970 aa4.63□□□□□ -1.67
SCAF11-205ENST00000465950 LRBAP50851 2863 aa4.63□□□□□ -1.67
SCAF11-205ENST00000465950 LAMA5O15230 3695 aa4.62□□□□□ -1.67
SCAF11-205ENST00000465950 CSMD2Q7Z408 3487 aa4.62□□□□□ -1.67
SCAF11-205ENST00000465950 SVEP1Q4LDE5 3571 aa4.6□□□□□ -1.67
SCAF11-205ENST00000465950 DNAH12Q6ZR08 3092 aa4.58□□□□□ -1.68
SCAF11-205ENST00000465950 PRUNE2Q8WUY3 3088 aa4.57□□□□□ -1.68
SCAF11-205ENST00000465950 P0C880 135 aa4.56□□□□□ -1.68
SCAF11-205ENST00000465950 NF1P21359 2839 aa4.54□□□□□ -1.68
SCAF11-205ENST00000465950 PDZD2O15018 2839 aa4.54□□□□□ -1.68
SCAF11-205ENST00000465950 COL12A1Q99715 3063 aa4.53□□□□□ -1.68
SCAF11-205ENST00000465950 KRTAP4-5Q9BYR2 181 aa4.53□□□□□ -1.68
SCAF11-205ENST00000465950 A8MU10 97 aa4.52□□□□□ -1.69
SCAF11-205ENST00000465950 TACC2O95359 2948 aa4.52□□□□□ -1.69
SCAF11-205ENST00000465950 CYSTM1Q9H1C7 97 aa4.49□□□□□ -1.69
SCAF11-205ENST00000465950 NBEAQ8NFP9 2946 aa4.49□□□□□ -1.69
SCAF11-205ENST00000465950 LOC400499M0QZD8 3231 aa4.48□□□□□ -1.69
SCAF11-205ENST00000465950 FBN2P35556 2912 aa4.47□□□□□ -1.69
SCAF11-205ENST00000465950 KRTAP10-4P60372 401 aaPredicted RBP4.47□□□□□ -1.69
SCAF11-205ENST00000465950 C10orf95Q9H7T3 257 aa4.46□□□□□ -1.69
SCAF11-205ENST00000465950 WDFY4Q6ZS81 3184 aa4.46□□□□□ -1.7
SCAF11-205ENST00000465950 ATMQ13315 3056 aa4.45□□□□□ -1.7
SCAF11-205ENST00000465950 FRYLO94915 3013 aa4.45□□□□□ -1.7
SCAF11-205ENST00000465950 CUBNO60494 3623 aa4.45□□□□□ -1.7
SCAF11-205ENST00000465950 DCHS2Q6V1P9 2916 aa4.41□□□□□ -1.7
SCAF11-205ENST00000465950 ALMS1Q8TCU4 4167 aa4.39□□□□□ -1.71
SCAF11-205ENST00000465950 AKAP9Q99996 3911 aa4.39□□□□□ -1.71
SCAF11-205ENST00000465950 KALRNO60229 2985 aa4.38□□□□□ -1.71
SCAF11-205ENST00000465950 KRTAP13-4Q3LI77 160 aa4.38□□□□□ -1.71
SCAF11-205ENST00000465950 VPS13CQ709C8 3753 aa4.38□□□□□ -1.71
SCAF11-205ENST00000465950 OTOGQ6ZRI0 2925 aa4.38□□□□□ -1.71
SCAF11-205ENST00000465950 VPS13AQ96RL7 3174 aa4.37□□□□□ -1.71
SCAF11-205ENST00000465950 DMXL2Q8TDJ6 3036 aa4.37□□□□□ -1.71
SCAF11-205ENST00000465950 A0A0C4DFX4 3053 aa4.37□□□□□ -1.71
SCAF11-205ENST00000465950 ZNF469Q96JG9 3925 aaPredicted RBP4.36□□□□□ -1.71
SCAF11-205ENST00000465950 CELSR2Q9HCU4 2923 aa4.36□□□□□ -1.71
SCAF11-205ENST00000465950 ZZEF1O43149 2961 aa4.36□□□□□ -1.71
SCAF11-205ENST00000465950 HUWE1Q7Z6Z7 4374 aaKnown RBP4.34□□□□□ -1.71
SCAF11-205ENST00000465950 DCHS1Q96JQ0 3298 aa4.33□□□□□ -1.72
SCAF11-205ENST00000465950 BSNQ9UPA5 3926 aa4.33□□□□□ -1.72
SCAF11-205ENST00000465950 PKD1L1Q8TDX9 2849 aa4.32□□□□□ -1.72
SCAF11-205ENST00000465950 CELSR3Q9NYQ7 3312 aa4.31□□□□□ -1.72
SCAF11-205ENST00000465950 KRTAP8-1Q8IUC2 63 aa4.3□□□□□ -1.72
SCAF11-205ENST00000465950 BOD1L1Q8NFC6 3051 aa4.3□□□□□ -1.72
SCAF11-205ENST00000465950 PRAC1Q96KF2 57 aa4.3□□□□□ -1.72
SCAF11-205ENST00000465950 TRIOO75962 3097 aa4.29□□□□□ -1.72
SCAF11-205ENST00000465950 CSMD3Q7Z407 3707 aa4.28□□□□□ -1.72
SCAF11-205ENST00000465950 KRTAP10-12P60413 245 aa4.28□□□□□ -1.72
SCAF11-205ENST00000465950 ZANQ9Y493 2812 aa4.26□□□□□ -1.73
SCAF11-205ENST00000465950 KRTAP15-1Q3LI76 137 aa4.26□□□□□ -1.73
SCAF11-205ENST00000465950 TGP01266 2768 aa4.24□□□□□ -1.73
SCAF11-205ENST00000465950 CFAP47Q6ZTR5 3102 aa4.24□□□□□ -1.73
SCAF11-205ENST00000465950 HRNRQ86YZ3 2850 aaPredicted RBP4.21□□□□□ -1.74
SCAF11-205ENST00000465950 KRTAP10-6P60371 365 aaPredicted RBP4.21□□□□□ -1.74
SCAF11-205ENST00000465950 LORP23490 312 aaPredicted RBP4.2□□□□□ -1.74
SCAF11-205ENST00000465950 VWFP04275 2813 aa4.16□□□□□ -1.74
SCAF11-205ENST00000465950 CELSR1Q9NYQ6 3014 aa4.15□□□□□ -1.74
SCAF11-205ENST00000465950 MT1HP80294 61 aa4.15□□□□□ -1.75
SCAF11-205ENST00000465950 KRTAP19-4Q3LI73 84 aa4.14□□□□□ -1.75
SCAF11-205ENST00000465950 KRTAP23-1A1A580 65 aa4.14□□□□□ -1.75
SCAF11-205ENST00000465950 KRTAP12-2P59991 146 aa4.14□□□□□ -1.75
SCAF11-205ENST00000465950 FREM2Q5SZK8 3169 aa4.13□□□□□ -1.75
SCAF11-205ENST00000465950 KRTAP12-1P59990 96 aa4.12□□□□□ -1.75
SCAF11-205ENST00000465950 DNAH1Q9P2D7 4330 aa4.11□□□□□ -1.75
SCAF11-205ENST00000465950 FBN1P35555 2871 aaKnown RBP4.11□□□□□ -1.75
SCAF11-205ENST00000465950 DMXL1Q9Y485 3027 aa4.1□□□□□ -1.75
SCAF11-205ENST00000465950 KRTAP3-1Q9BYR8 98 aa4.09□□□□□ -1.75
SCAF11-205ENST00000465950 ANK3Q12955 4377 aaKnown RBP4.05□□□□□ -1.76
SCAF11-205ENST00000465950 ADGRG4Q8IZF6 3080 aa4.05□□□□□ -1.76
SCAF11-205ENST00000465950 DNAH11Q96DT5 4516 aa4.03□□□□□ -1.76
SCAF11-205ENST00000465950 KRTAP10-7P60409 375 aaPredicted RBP4.01□□□□□ -1.77
SCAF11-205ENST00000465950 ANK2Q01484 3957 aa4.01□□□□□ -1.77
SCAF11-205ENST00000465950 KRTAP12-3P60328 96 aa4.01□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 78.8 ms