RNA–Protein interactions for RNA: ENST00000465727.5

SDF4-205, Transcript of stromal cell derived factor 4, humanhuman

TSL 2

Gene SDF4, Length 2,095 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-205ENST00000465727 A0A087X002 238 aa11.73□□□□□ -0.53
SDF4-205ENST00000465727 ACYP2P14621 99 aa11.73□□□□□ -0.53
SDF4-205ENST00000465727 NOTCH2NLQ7Z3S9 236 aa11.73□□□□□ -0.53
SDF4-205ENST00000465727 KRTAP13-3Q3SY46 172 aa11.72□□□□□ -0.53
SDF4-205ENST00000465727 PRR26Q8N8Z3 221 aa11.7□□□□□ -0.54
SDF4-205ENST00000465727 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP11.7□□□□□ -0.54
SDF4-205ENST00000465727 NBDYA0A0U1RRE5 68 aa11.69□□□□□ -0.54
SDF4-205ENST00000465727 Q6ZRN7 208 aaPredicted RBP11.69□□□□□ -0.54
SDF4-205ENST00000465727 Q5W150 140 aa11.67□□□□□ -0.54
SDF4-205ENST00000465727 IGLV5-52A0A0A0MRZ9 124 aa11.65□□□□□ -0.54
SDF4-205ENST00000465727 ZNF861PO60384 105 aa11.63□□□□□ -0.55
SDF4-205ENST00000465727 DMAC1Q96GE9 116 aa11.63□□□□□ -0.55
SDF4-205ENST00000465727 PSORS1C2Q9UIG4 136 aa11.63□□□□□ -0.55
SDF4-205ENST00000465727 C8orf87E5RJ46 101 aa11.62□□□□□ -0.55
SDF4-205ENST00000465727 STAB2Q8WWQ8 2551 aa11.6□□□□□ -0.55
SDF4-205ENST00000465727 ALMS1Q8TCU4 4167 aa11.6□□□□□ -0.55
SDF4-205ENST00000465727 CSMD3Q7Z407 3707 aa11.59□□□□□ -0.55
SDF4-205ENST00000465727 COL7A1Q02388 2944 aa11.59□□□□□ -0.55
SDF4-205ENST00000465727 PRKDCP78527 4128 aaKnown RBP11.58□□□□□ -0.56
SDF4-205ENST00000465727 SPINK6Q6UWN8 80 aa11.58□□□□□ -0.56
SDF4-205ENST00000465727 DYNC2H1Q8NCM8 4307 aaKnown RBP11.57□□□□□ -0.56
SDF4-205ENST00000465727 ANAPC11Q9NYG5 84 aa11.57□□□□□ -0.56
SDF4-205ENST00000465727 LINC00313P59037 77 aa11.56□□□□□ -0.56
SDF4-205ENST00000465727 TGP01266 2768 aa11.54□□□□□ -0.56
SDF4-205ENST00000465727 A0A1B0GU69 56 aa11.53□□□□□ -0.56
SDF4-205ENST00000465727 FAM229AH3BQW9 127 aa11.53□□□□□ -0.56
SDF4-205ENST00000465727 PLA2G1BP04054 148 aaKnown RBP11.51□□□□□ -0.57
SDF4-205ENST00000465727 A0A087WTM6 91 aa11.51□□□□□ -0.57
SDF4-205ENST00000465727 SPATA8Q6RVD6 105 aa11.5□□□□□ -0.57
SDF4-205ENST00000465727 NUPR2A6NF83 97 aa11.48□□□□□ -0.57
SDF4-205ENST00000465727 RTL8CO15255 209 aa11.48□□□□□ -0.57
SDF4-205ENST00000465727 DNAH7Q8WXX0 4024 aa11.47□□□□□ -0.57
SDF4-205ENST00000465727 SSBP3-AS1Q7Z2R9 100 aa11.47□□□□□ -0.57
SDF4-205ENST00000465727 CIRBP-AS1Q8TBR5 109 aa11.46□□□□□ -0.57
SDF4-205ENST00000465727 DNAH8Q96JB1 4490 aa11.46□□□□□ -0.58
SDF4-205ENST00000465727 IGKV2-30P06310 120 aa11.45□□□□□ -0.58
SDF4-205ENST00000465727 UQCR11O14957 56 aa11.42□□□□□ -0.58
SDF4-205ENST00000465727 IGLV7-43P04211 117 aa11.42□□□□□ -0.58
SDF4-205ENST00000465727 PRAC1Q96KF2 57 aa11.4□□□□□ -0.58
SDF4-205ENST00000465727 MIR22HGQ0VDD5 57 aa11.39□□□□□ -0.59
SDF4-205ENST00000465727 PLECQ15149 4684 aaKnown RBP11.37□□□□□ -0.59
SDF4-205ENST00000465727 FRAS1Q86XX4 4008 aa11.35□□□□□ -0.59
SDF4-205ENST00000465727 HECTD4Q9Y4D8 3996 aa11.34□□□□□ -0.59
SDF4-205ENST00000465727 ADM2Q7Z4H4 148 aa11.32□□□□□ -0.6
SDF4-205ENST00000465727 LINC01554Q52M75 96 aa11.31□□□□□ -0.6
SDF4-205ENST00000465727 VPS13DQ5THJ4 4388 aa11.29□□□□□ -0.6
SDF4-205ENST00000465727 RETNLBQ9BQ08 111 aa11.28□□□□□ -0.6
SDF4-205ENST00000465727 KRTAP16-1A8MUX0 517 aa11.27□□□□□ -0.61
SDF4-205ENST00000465727 DNAH17Q9UFH2 4485 aa11.25□□□□□ -0.61
SDF4-205ENST00000465727 IGKV2D-30A0A075B6S6 120 aa11.21□□□□□ -0.62
SDF4-205ENST00000465727 KRTAP13-2Q52LG2 175 aa11.15□□□□□ -0.63
SDF4-205ENST00000465727 C1orf134Q5TEV5 83 aa11.12□□□□□ -0.63
SDF4-205ENST00000465727 STARD9Q9P2P6 4700 aa11.11□□□□□ -0.63
SDF4-205ENST00000465727 DNAH2Q9P225 4427 aa11.08□□□□□ -0.63
SDF4-205ENST00000465727 CSAG1Q6PB30 78 aa11.07□□□□□ -0.64
SDF4-205ENST00000465727 C4orf48Q5BLP8 95 aa11.05□□□□□ -0.64
SDF4-205ENST00000465727 LY6G6CO95867 125 aa11.02□□□□□ -0.65
SDF4-205ENST00000465727 KMT2CQ8NEZ4 4911 aaKnown RBP10.99□□□□□ -0.65
SDF4-205ENST00000465727 KMT2AQ03164 3969 aa10.99□□□□□ -0.65
SDF4-205ENST00000465727 SPINK1P00995 79 aa10.97□□□□□ -0.65
SDF4-205ENST00000465727 DNAH11Q96DT5 4516 aa10.96□□□□□ -0.66
SDF4-205ENST00000465727 KRTAP1-4P0C5Y4 121 aa10.96□□□□□ -0.66
SDF4-205ENST00000465727 Q8N1X5 172 aa10.92□□□□□ -0.66
SDF4-205ENST00000465727 Q6ZSA8 131 aa10.91□□□□□ -0.66
SDF4-205ENST00000465727 A8MUU9 505 aa10.89□□□□□ -0.67
SDF4-205ENST00000465727 KRTAP10-2P60368 255 aa10.89□□□□□ -0.67
SDF4-205ENST00000465727 RYR3Q15413 4870 aa10.88□□□□□ -0.67
SDF4-205ENST00000465727 DNAH6Q9C0G6 4158 aa10.87□□□□□ -0.67
SDF4-205ENST00000465727 H0YAA0 97 aa10.87□□□□□ -0.67
SDF4-205ENST00000465727 TYMSOSQ8TAI1 123 aa10.85□□□□□ -0.67
SDF4-205ENST00000465727 DNAH5Q8TE73 4624 aa10.84□□□□□ -0.67
SDF4-205ENST00000465727 RPS29P62273 56 aaKnown RBP10.81□□□□□ -0.68
SDF4-205ENST00000465727 A0A1B0GU33 70 aa10.79□□□□□ -0.68
SDF4-205ENST00000465727 RYR2Q92736 4967 aa10.79□□□□□ -0.68
SDF4-205ENST00000465727 KRTAP25-1Q3LHN0 102 aa10.78□□□□□ -0.68
SDF4-205ENST00000465727 SACSQ9NZJ4 4579 aa10.78□□□□□ -0.68
SDF4-205ENST00000465727 KRTAP10-1P60331 282 aa10.78□□□□□ -0.68
SDF4-205ENST00000465727 H3BS24 57 aa10.77□□□□□ -0.69
SDF4-205ENST00000465727 LINC00304Q8N9R0 145 aa10.77□□□□□ -0.69
SDF4-205ENST00000465727 LRP1BQ9NZR2 4599 aa10.75□□□□□ -0.69
SDF4-205ENST00000465727 H1FX-AS1Q4G0G2 97 aa10.73□□□□□ -0.69
SDF4-205ENST00000465727 HYDINQ4G0P3 5121 aa10.69□□□□□ -0.7
SDF4-205ENST00000465727 C20orf166-AS1Q96NR2 134 aa10.67□□□□□ -0.7
SDF4-205ENST00000465727 KRTAP3-1Q9BYR8 98 aa10.65□□□□□ -0.7
SDF4-205ENST00000465727 VPS13BQ7Z7G8 4022 aa10.64□□□□□ -0.71
SDF4-205ENST00000465727 K7ERS5 55 aa10.63□□□□□ -0.71
SDF4-205ENST00000465727 PKD1P98161 4303 aa10.63□□□□□ -0.71
SDF4-205ENST00000465727 ROMO1P60602 79 aa10.61□□□□□ -0.71
SDF4-205ENST00000465727 C9orf92A6NGG3 77 aa10.51□□□□□ -0.73
SDF4-205ENST00000465727 EPPK1P58107 5090 aaKnown RBP10.51□□□□□ -0.73
SDF4-205ENST00000465727 COX6B2Q6YFQ2 88 aa10.5□□□□□ -0.73
SDF4-205ENST00000465727 FAT2Q9NYQ8 4349 aa10.5□□□□□ -0.73
SDF4-205ENST00000465727 BIRC6Q9NR09 4857 aa10.38□□□□□ -0.75
SDF4-205ENST00000465727 RPL37P61927 97 aaKnown RBP10.34□□□□□ -0.75
SDF4-205ENST00000465727 CRIPTQ9P021 101 aa10.33□□□□□ -0.76
SDF4-205ENST00000465727 FLG2Q5D862 2391 aaPredicted RBP10.31□□□□□ -0.76
SDF4-205ENST00000465727 PKHD1L1Q86WI1 4243 aa10.31□□□□□ -0.76
SDF4-205ENST00000465727 KRTAP10-6P60371 365 aaPredicted RBP10.26□□□□□ -0.77
SDF4-205ENST00000465727 P0C880 135 aa10.22□□□□□ -0.77
SDF4-205ENST00000465727 A0A1B0GVY2 172 aa10.21□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms