RNA–Protein interactions for RNA: ENST00000456009.4

CCDC144A-210, Transcript of coiled-coil domain containing 144A, humanhuman

TSL 5 BASIC

Gene CCDC144A, Length 2,306 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144A-210ENST00000456009 TP53AIP1Q9HCN2 124 aa10.38□□□□□ -0.75
CCDC144A-210ENST00000456009 CDK2AP2O75956 126 aa10.37□□□□□ -0.75
CCDC144A-210ENST00000456009 KRTAP10-2P60368 255 aa10.37□□□□□ -0.75
CCDC144A-210ENST00000456009 SPINK6Q6UWN8 80 aa10.37□□□□□ -0.75
CCDC144A-210ENST00000456009 CIRBP-AS1Q8TBR5 109 aa10.36□□□□□ -0.75
CCDC144A-210ENST00000456009 DNAH5Q8TE73 4624 aa10.36□□□□□ -0.75
CCDC144A-210ENST00000456009 MRPL34Q9BQ48 92 aaKnown RBP10.35□□□□□ -0.75
CCDC144A-210ENST00000456009 CD164Q04900 197 aa10.34□□□□□ -0.75
CCDC144A-210ENST00000456009 IGLV7-46A0A075B6I9 117 aa10.33□□□□□ -0.76
CCDC144A-210ENST00000456009 A8MUN3 132 aa10.29□□□□□ -0.76
CCDC144A-210ENST00000456009 COA5Q86WW8 74 aa10.27□□□□□ -0.77
CCDC144A-210ENST00000456009 Q8N9P0 234 aaPredicted RBP10.27□□□□□ -0.77
CCDC144A-210ENST00000456009 Q5W150 140 aa10.26□□□□□ -0.77
CCDC144A-210ENST00000456009 LRP1BQ9NZR2 4599 aa10.26□□□□□ -0.77
CCDC144A-210ENST00000456009 SSBP3-AS1Q7Z2R9 100 aa10.23□□□□□ -0.77
CCDC144A-210ENST00000456009 HYDINQ4G0P3 5121 aa10.23□□□□□ -0.77
CCDC144A-210ENST00000456009 KRTAP10-1P60331 282 aa10.22□□□□□ -0.77
CCDC144A-210ENST00000456009 Q5VV11 94 aa10.22□□□□□ -0.77
CCDC144A-210ENST00000456009 PKD1P98161 4303 aa10.22□□□□□ -0.77
CCDC144A-210ENST00000456009 V9GYY9 64 aa10.21□□□□□ -0.77
CCDC144A-210ENST00000456009 KRTAP13-2Q52LG2 175 aa10.2□□□□□ -0.78
CCDC144A-210ENST00000456009 KRTAP13-3Q3SY46 172 aa10.18□□□□□ -0.78
CCDC144A-210ENST00000456009 FAT2Q9NYQ8 4349 aa10.18□□□□□ -0.78
CCDC144A-210ENST00000456009 A8MU10 97 aa10.16□□□□□ -0.78
CCDC144A-210ENST00000456009 Q6ZSA8 131 aa10.16□□□□□ -0.78
CCDC144A-210ENST00000456009 LIMD2Q9BT23 127 aa10.15□□□□□ -0.79
CCDC144A-210ENST00000456009 PRR15LQ9BU68 103 aa10.15□□□□□ -0.79
CCDC144A-210ENST00000456009 HRES1P13985 223 aa10.14□□□□□ -0.79
CCDC144A-210ENST00000456009 C1orf195Q5TG92 126 aa10.13□□□□□ -0.79
CCDC144A-210ENST00000456009 VPS13BQ7Z7G8 4022 aa10.13□□□□□ -0.79
CCDC144A-210ENST00000456009 LOC101927531A0A1B0GV80 90 aa10.12□□□□□ -0.79
CCDC144A-210ENST00000456009 CHKB-CPT1BH3BT56 60 aa10.1□□□□□ -0.79
CCDC144A-210ENST00000456009 LINC00313P59037 77 aa10.1□□□□□ -0.79
CCDC144A-210ENST00000456009 SPAG11AQ6PDA7 123 aa10.1□□□□□ -0.79
CCDC144A-210ENST00000456009 C8orf87E5RJ46 101 aa10.09□□□□□ -0.79
CCDC144A-210ENST00000456009 RETNLBQ9BQ08 111 aa10.09□□□□□ -0.79
CCDC144A-210ENST00000456009 KRTAP1-4P0C5Y4 121 aa10.08□□□□□ -0.8
CCDC144A-210ENST00000456009 Q75L30 129 aa10.01□□□□□ -0.81
CCDC144A-210ENST00000456009 PRR26Q8N8Z3 221 aa10.01□□□□□ -0.81
CCDC144A-210ENST00000456009 LINC01558Q9Y6Z2 57 aa10□□□□□ -0.81
CCDC144A-210ENST00000456009 KRTAP16-1A8MUX0 517 aa10□□□□□ -0.81
CCDC144A-210ENST00000456009 PKHD1P08F94 4074 aa9.99□□□□□ -0.81
CCDC144A-210ENST00000456009 PLA2G1BP04054 148 aaKnown RBP9.98□□□□□ -0.81
CCDC144A-210ENST00000456009 FAM229AH3BQW9 127 aa9.98□□□□□ -0.81
CCDC144A-210ENST00000456009 LCA10Q71F78 164 aa9.98□□□□□ -0.81
CCDC144A-210ENST00000456009 A6NED7 52 aa9.95□□□□□ -0.82
CCDC144A-210ENST00000456009 IGKV2-30P06310 120 aa9.93□□□□□ -0.82
CCDC144A-210ENST00000456009 ACYP2P14621 99 aa9.93□□□□□ -0.82
CCDC144A-210ENST00000456009 TYMSOSQ8TAI1 123 aa9.92□□□□□ -0.82
CCDC144A-210ENST00000456009 DMAC1Q96GE9 116 aa9.9□□□□□ -0.82
CCDC144A-210ENST00000456009 C4orf48Q5BLP8 95 aa9.89□□□□□ -0.83
CCDC144A-210ENST00000456009 SPINK7P58062 85 aa9.88□□□□□ -0.83
CCDC144A-210ENST00000456009 PMAIP1Q13794 54 aa9.86□□□□□ -0.83
CCDC144A-210ENST00000456009 SPTSSBQ8NFR3 76 aa9.86□□□□□ -0.83
CCDC144A-210ENST00000456009 IGKV2D-30A0A075B6S6 120 aa9.85□□□□□ -0.83
CCDC144A-210ENST00000456009 SPINK1P00995 79 aa9.84□□□□□ -0.83
CCDC144A-210ENST00000456009 SACSQ9NZJ4 4579 aa9.84□□□□□ -0.83
CCDC144A-210ENST00000456009 SMR3BP02814 79 aaPredicted RBP9.82□□□□□ -0.84
CCDC144A-210ENST00000456009 CDC42SE1Q9NRR8 79 aa9.82□□□□□ -0.84
CCDC144A-210ENST00000456009 ATP11AUNQ6ZP68 121 aa9.78□□□□□ -0.84
CCDC144A-210ENST00000456009 DYNC1H1Q14204 4646 aaKnown RBP9.76□□□□□ -0.85
CCDC144A-210ENST00000456009 LINC00304Q8N9R0 145 aa9.76□□□□□ -0.85
CCDC144A-210ENST00000456009 FAT1Q14517 4588 aa9.75□□□□□ -0.85
CCDC144A-210ENST00000456009 C7orf65Q6ZTY9 151 aa9.7□□□□□ -0.86
CCDC144A-210ENST00000456009 A6NN06 94 aa9.67□□□□□ -0.86
CCDC144A-210ENST00000456009 A0A1B0GU69 56 aa9.66□□□□□ -0.86
CCDC144A-210ENST00000456009 RPS29P62273 56 aaKnown RBP9.66□□□□□ -0.86
CCDC144A-210ENST00000456009 KRTAP21-3Q3LHN1 58 aa9.65□□□□□ -0.86
CCDC144A-210ENST00000456009 KRTAP10-4P60372 401 aaPredicted RBP9.65□□□□□ -0.87
CCDC144A-210ENST00000456009 A0A1B0GVY2 172 aa9.64□□□□□ -0.87
CCDC144A-210ENST00000456009 C9orf92A6NGG3 77 aa9.64□□□□□ -0.87
CCDC144A-210ENST00000456009 APOBP04114 4563 aaKnown RBP9.64□□□□□ -0.87
CCDC144A-210ENST00000456009 Q8N1X5 172 aa9.64□□□□□ -0.87
CCDC144A-210ENST00000456009 PKHD1L1Q86WI1 4243 aa9.6□□□□□ -0.87
CCDC144A-210ENST00000456009 SEC61GP60059 68 aa9.59□□□□□ -0.87
CCDC144A-210ENST00000456009 KTN1-AS1Q86SY8 53 aa9.59□□□□□ -0.87
CCDC144A-210ENST00000456009 A8MUU9 505 aa9.53□□□□□ -0.88
CCDC144A-210ENST00000456009 C20orf166-AS1Q96NR2 134 aa9.53□□□□□ -0.88
CCDC144A-210ENST00000456009 SPATA8Q6RVD6 105 aa9.5□□□□□ -0.89
CCDC144A-210ENST00000456009 KMT2CQ8NEZ4 4911 aaKnown RBP9.49□□□□□ -0.89
CCDC144A-210ENST00000456009 RYR2Q92736 4967 aa9.47□□□□□ -0.89
CCDC144A-210ENST00000456009 UQCR11O14957 56 aa9.47□□□□□ -0.89
CCDC144A-210ENST00000456009 MIR22HGQ0VDD5 57 aa9.46□□□□□ -0.9
CCDC144A-210ENST00000456009 KRTAP3-1Q9BYR8 98 aa9.46□□□□□ -0.9
CCDC144A-210ENST00000456009 FLG2Q5D862 2391 aaPredicted RBP9.42□□□□□ -0.9
CCDC144A-210ENST00000456009 LRP1Q07954 4544 aaKnown RBP9.41□□□□□ -0.9
CCDC144A-210ENST00000456009 RBM12B-AS1Q9P1G2 102 aa9.37□□□□□ -0.91
CCDC144A-210ENST00000456009 TNXBP22105 4242 aa9.32□□□□□ -0.92
CCDC144A-210ENST00000456009 ADM2Q7Z4H4 148 aa9.32□□□□□ -0.92
CCDC144A-210ENST00000456009 FAT3Q8TDW7 4589 aa9.31□□□□□ -0.92
CCDC144A-210ENST00000456009 PRAC1Q96KF2 57 aa9.29□□□□□ -0.92
CCDC144A-210ENST00000456009 HSPG2P98160 4391 aa9.25□□□□□ -0.93
CCDC144A-210ENST00000456009 KRTAP10-8P60410 259 aa9.25□□□□□ -0.93
CCDC144A-210ENST00000456009 H0YAA0 97 aa9.22□□□□□ -0.93
CCDC144A-210ENST00000456009 DMBT1Q9UGM3 2413 aaPredicted RBP9.22□□□□□ -0.93
CCDC144A-210ENST00000456009 COX6B2Q6YFQ2 88 aa9.21□□□□□ -0.93
CCDC144A-210ENST00000456009 Q5VSD8 79 aa9.21□□□□□ -0.94
CCDC144A-210ENST00000456009 KRTAP17-1Q9BYP8 105 aa9.2□□□□□ -0.94
CCDC144A-210ENST00000456009 MYCBP2O75592 4640 aa9.2□□□□□ -0.94
CCDC144A-210ENST00000456009 A0A1B0GU33 70 aa9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 104.8 ms