RNA–Protein interactions for RNA: ENST00000453744.6

UBE2D3-210, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene UBE2D3, Length 3,990 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-210ENST00000453744 IGLV5-52A0A0A0MRZ9 124 aa8.33□□□□□ -1.08
UBE2D3-210ENST00000453744 ZNF861PO60384 105 aa8.31□□□□□ -1.08
UBE2D3-210ENST00000453744 LINC00313P59037 77 aa8.3□□□□□ -1.08
UBE2D3-210ENST00000453744 A6NN06 94 aa8.3□□□□□ -1.08
UBE2D3-210ENST00000453744 Q5W150 140 aa8.3□□□□□ -1.08
UBE2D3-210ENST00000453744 Q96NJ1 140 aa8.29□□□□□ -1.08
UBE2D3-210ENST00000453744 NUPR2A6NF83 97 aa8.28□□□□□ -1.08
UBE2D3-210ENST00000453744 Q6ZR54 194 aa8.28□□□□□ -1.08
UBE2D3-210ENST00000453744 SPACA4Q8TDM5 124 aa8.28□□□□□ -1.08
UBE2D3-210ENST00000453744 WWC2-AS2Q96NR7 200 aa8.28□□□□□ -1.08
UBE2D3-210ENST00000453744 A0A087WTM6 91 aa8.27□□□□□ -1.09
UBE2D3-210ENST00000453744 C4orf48Q5BLP8 95 aa8.27□□□□□ -1.09
UBE2D3-210ENST00000453744 TGP01266 2768 aa8.26□□□□□ -1.09
UBE2D3-210ENST00000453744 C8orf87E5RJ46 101 aa8.22□□□□□ -1.09
UBE2D3-210ENST00000453744 FAM229AH3BQW9 127 aa8.22□□□□□ -1.09
UBE2D3-210ENST00000453744 MIR22HGQ0VDD5 57 aa8.22□□□□□ -1.09
UBE2D3-210ENST00000453744 ADM2Q7Z4H4 148 aa8.22□□□□□ -1.09
UBE2D3-210ENST00000453744 UQCR11O14957 56 aa8.2□□□□□ -1.1
UBE2D3-210ENST00000453744 C1orf134Q5TEV5 83 aa8.2□□□□□ -1.1
UBE2D3-210ENST00000453744 KRTAP13-1Q8IUC0 172 aa8.19□□□□□ -1.1
UBE2D3-210ENST00000453744 IGLV7-43P04211 117 aa8.17□□□□□ -1.1
UBE2D3-210ENST00000453744 LINC00483Q53H64 154 aa8.14□□□□□ -1.11
UBE2D3-210ENST00000453744 Q8N1X5 172 aa8.14□□□□□ -1.11
UBE2D3-210ENST00000453744 FLG2Q5D862 2391 aaPredicted RBP8.13□□□□□ -1.11
UBE2D3-210ENST00000453744 SSBP3-AS1Q7Z2R9 100 aa8.11□□□□□ -1.11
UBE2D3-210ENST00000453744 ASB16-AS1Q495Z4 193 aa8.09□□□□□ -1.11
UBE2D3-210ENST00000453744 Q6ZRN7 208 aaPredicted RBP8.08□□□□□ -1.12
UBE2D3-210ENST00000453744 DMAC1Q96GE9 116 aa8.08□□□□□ -1.12
UBE2D3-210ENST00000453744 LINC01554Q52M75 96 aa8.07□□□□□ -1.12
UBE2D3-210ENST00000453744 PLAC8Q9NZF1 115 aa8.06□□□□□ -1.12
UBE2D3-210ENST00000453744 FBN3Q75N90 2809 aa8.05□□□□□ -1.12
UBE2D3-210ENST00000453744 CSAG1Q6PB30 78 aa8.05□□□□□ -1.12
UBE2D3-210ENST00000453744 DNAH10Q8IVF4 4471 aa8.03□□□□□ -1.12
UBE2D3-210ENST00000453744 SMR3BP02814 79 aaPredicted RBP8.01□□□□□ -1.13
UBE2D3-210ENST00000453744 PLA2G1BP04054 148 aaKnown RBP8□□□□□ -1.13
UBE2D3-210ENST00000453744 TYMSOSQ8TAI1 123 aa8□□□□□ -1.13
UBE2D3-210ENST00000453744 SPATA8Q6RVD6 105 aa7.96□□□□□ -1.13
UBE2D3-210ENST00000453744 ANK2Q01484 3957 aa7.96□□□□□ -1.14
UBE2D3-210ENST00000453744 C9orf92A6NGG3 77 aa7.95□□□□□ -1.14
UBE2D3-210ENST00000453744 K7ERS5 55 aa7.92□□□□□ -1.14
UBE2D3-210ENST00000453744 CRIPTQ9P021 101 aa7.91□□□□□ -1.14
UBE2D3-210ENST00000453744 KRTAP10-2P60368 255 aa7.91□□□□□ -1.14
UBE2D3-210ENST00000453744 H3BS24 57 aa7.91□□□□□ -1.14
UBE2D3-210ENST00000453744 HUWE1Q7Z6Z7 4374 aaKnown RBP7.88□□□□□ -1.15
UBE2D3-210ENST00000453744 KRTAP13-3Q3SY46 172 aa7.88□□□□□ -1.15
UBE2D3-210ENST00000453744 KRTAP13-2Q52LG2 175 aa7.87□□□□□ -1.15
UBE2D3-210ENST00000453744 MEGF8Q7Z7M0 2845 aa7.86□□□□□ -1.15
UBE2D3-210ENST00000453744 A0A1B0GU33 70 aa7.81□□□□□ -1.16
UBE2D3-210ENST00000453744 LINC00304Q8N9R0 145 aa7.81□□□□□ -1.16
UBE2D3-210ENST00000453744 LYSTQ99698 3801 aa7.8□□□□□ -1.16
UBE2D3-210ENST00000453744 KRTAP10-1P60331 282 aa7.8□□□□□ -1.16
UBE2D3-210ENST00000453744 CMYA5Q8N3K9 4069 aa7.75□□□□□ -1.17
UBE2D3-210ENST00000453744 DNAH9Q9NYC9 4486 aa7.74□□□□□ -1.17
UBE2D3-210ENST00000453744 A0A0D9SG42 100 aa7.73□□□□□ -1.17
UBE2D3-210ENST00000453744 KRTAP16-1A8MUX0 517 aa7.71□□□□□ -1.18
UBE2D3-210ENST00000453744 Q6ZSA8 131 aa7.67□□□□□ -1.18
UBE2D3-210ENST00000453744 PLECQ15149 4684 aaKnown RBP7.66□□□□□ -1.18
UBE2D3-210ENST00000453744 SPINT4Q6UDR6 99 aa7.65□□□□□ -1.18
UBE2D3-210ENST00000453744 H0YAA0 97 aa7.63□□□□□ -1.19
UBE2D3-210ENST00000453744 H1FX-AS1Q4G0G2 97 aa7.63□□□□□ -1.19
UBE2D3-210ENST00000453744 KRTAP1-4P0C5Y4 121 aa7.61□□□□□ -1.19
UBE2D3-210ENST00000453744 KRTAP25-1Q3LHN0 102 aa7.61□□□□□ -1.19
UBE2D3-210ENST00000453744 DNAH1Q9P2D7 4330 aa7.6□□□□□ -1.19
UBE2D3-210ENST00000453744 FRAS1Q86XX4 4008 aa7.57□□□□□ -1.2
UBE2D3-210ENST00000453744 DNAH8Q96JB1 4490 aa7.56□□□□□ -1.2
UBE2D3-210ENST00000453744 DNAH3Q8TD57 4116 aa7.55□□□□□ -1.2
UBE2D3-210ENST00000453744 A8MUU9 505 aa7.55□□□□□ -1.2
UBE2D3-210ENST00000453744 DNAH7Q8WXX0 4024 aa7.53□□□□□ -1.2
UBE2D3-210ENST00000453744 J3QL48 77 aa7.53□□□□□ -1.2
UBE2D3-210ENST00000453744 DNHD1Q96M86 4753 aa7.53□□□□□ -1.2
UBE2D3-210ENST00000453744 ROMO1P60602 79 aa7.5□□□□□ -1.21
UBE2D3-210ENST00000453744 COX6B2Q6YFQ2 88 aa7.49□□□□□ -1.21
UBE2D3-210ENST00000453744 DNAH11Q96DT5 4516 aa7.44□□□□□ -1.22
UBE2D3-210ENST00000453744 RPL37P61927 97 aaKnown RBP7.44□□□□□ -1.22
UBE2D3-210ENST00000453744 STARD9Q9P2P6 4700 aa7.44□□□□□ -1.22
UBE2D3-210ENST00000453744 KMT2AQ03164 3969 aa7.42□□□□□ -1.22
UBE2D3-210ENST00000453744 DNAH17Q9UFH2 4485 aa7.41□□□□□ -1.22
UBE2D3-210ENST00000453744 PRKDCP78527 4128 aaKnown RBP7.41□□□□□ -1.22
UBE2D3-210ENST00000453744 KRTAP3-1Q9BYR8 98 aa7.39□□□□□ -1.23
UBE2D3-210ENST00000453744 C20orf166-AS1Q96NR2 134 aa7.36□□□□□ -1.23
UBE2D3-210ENST00000453744 C10orf95Q9H7T3 257 aa7.35□□□□□ -1.23
UBE2D3-210ENST00000453744 ALMS1Q8TCU4 4167 aa7.34□□□□□ -1.23
UBE2D3-210ENST00000453744 VPS13DQ5THJ4 4388 aa7.33□□□□□ -1.24
UBE2D3-210ENST00000453744 S4R3F8 94 aa7.31□□□□□ -1.24
UBE2D3-210ENST00000453744 LRP1BQ9NZR2 4599 aa7.31□□□□□ -1.24
UBE2D3-210ENST00000453744 DNAH2Q9P225 4427 aa7.29□□□□□ -1.24
UBE2D3-210ENST00000453744 RPS29P62273 56 aaKnown RBP7.29□□□□□ -1.24
UBE2D3-210ENST00000453744 HECTD4Q9Y4D8 3996 aa7.28□□□□□ -1.24
UBE2D3-210ENST00000453744 Q5VSD8 79 aa7.26□□□□□ -1.25
UBE2D3-210ENST00000453744 DNAH6Q9C0G6 4158 aa7.25□□□□□ -1.25
UBE2D3-210ENST00000453744 NDUFAF8A1L188 74 aa7.23□□□□□ -1.25
UBE2D3-210ENST00000453744 P0C880 135 aa7.18□□□□□ -1.26
UBE2D3-210ENST00000453744 KRTAP13-4Q3LI77 160 aa7.16□□□□□ -1.26
UBE2D3-210ENST00000453744 TPRXLQ17RH7 258 aa7.15□□□□□ -1.27
UBE2D3-210ENST00000453744 VPS13BQ7Z7G8 4022 aa7.12□□□□□ -1.27
UBE2D3-210ENST00000453744 DNAH5Q8TE73 4624 aa7.11□□□□□ -1.27
UBE2D3-210ENST00000453744 DYNC2H1Q8NCM8 4307 aaKnown RBP7.1□□□□□ -1.27
UBE2D3-210ENST00000453744 KRTAP10-6P60371 365 aaPredicted RBP7.09□□□□□ -1.28
UBE2D3-210ENST00000453744 FAT1Q14517 4588 aa7.08□□□□□ -1.28
UBE2D3-210ENST00000453744 KRTAP21-3Q3LHN1 58 aa7.07□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 108.5 ms