RNA–Protein interactions for RNA: ENST00000452520.1

HMGB1P26-201, Transcript of high mobility group box 1 pseudogene 26, humanhuman

BASIC

Gene HMGB1P26, Length 628 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P26-201ENST00000452520 CNFNQ9BYD5 112 aa1.06□□□□□ -2.24
HMGB1P26-201ENST00000452520 FRAS1Q86XX4 4008 aa1.05□□□□□ -2.24
HMGB1P26-201ENST00000452520 STAB2Q8WWQ8 2551 aa1.05□□□□□ -2.24
HMGB1P26-201ENST00000452520 DNAH3Q8TD57 4116 aa1.05□□□□□ -2.24
HMGB1P26-201ENST00000452520 HMGN3Q15651 99 aa1.05□□□□□ -2.24
HMGB1P26-201ENST00000452520 SPCS1Q9Y6A9 102 aa1.05□□□□□ -2.24
HMGB1P26-201ENST00000452520 CSMD3Q7Z407 3707 aa1.05□□□□□ -2.24
HMGB1P26-201ENST00000452520 HSPG2P98160 4391 aa1.04□□□□□ -2.24
HMGB1P26-201ENST00000452520 H3BQF6 201 aa1.04□□□□□ -2.24
HMGB1P26-201ENST00000452520 H3BSH0 61 aa1.04□□□□□ -2.24
HMGB1P26-201ENST00000452520 LEPROTL1O95214 131 aa1.04□□□□□ -2.24
HMGB1P26-201ENST00000452520 SMIM11AP58511 58 aa1.04□□□□□ -2.24
HMGB1P26-201ENST00000452520 TDRG1Q3Y452 100 aa1.04□□□□□ -2.24
HMGB1P26-201ENST00000452520 STARD9Q9P2P6 4700 aa1.04□□□□□ -2.24
HMGB1P26-201ENST00000452520 NCBP2-AS2Q69YL0 99 aa1.03□□□□□ -2.24
HMGB1P26-201ENST00000452520 TP53AIP1Q9HCN2 124 aa1.03□□□□□ -2.24
HMGB1P26-201ENST00000452520 FAT2Q9NYQ8 4349 aa1.03□□□□□ -2.24
HMGB1P26-201ENST00000452520 VPS13DQ5THJ4 4388 aa1.03□□□□□ -2.24
HMGB1P26-201ENST00000452520 ALMS1Q8TCU4 4167 aa1.03□□□□□ -2.25
HMGB1P26-201ENST00000452520 D6R8Y8 96 aa1.02□□□□□ -2.25
HMGB1P26-201ENST00000452520 MRPL33O75394 65 aaKnown RBP1.02□□□□□ -2.25
HMGB1P26-201ENST00000452520 PEA15Q15121 130 aa1.02□□□□□ -2.25
HMGB1P26-201ENST00000452520 MUSTN1Q8IVN3 82 aa1.02□□□□□ -2.25
HMGB1P26-201ENST00000452520 DEFB108BQ8NET1 73 aa1.02□□□□□ -2.25
HMGB1P26-201ENST00000452520 PRO0255Q9UI72 69 aa1.02□□□□□ -2.25
HMGB1P26-201ENST00000452520 KMT2AQ03164 3969 aa1.01□□□□□ -2.25
HMGB1P26-201ENST00000452520 DNAH17Q9UFH2 4485 aa1.01□□□□□ -2.25
HMGB1P26-201ENST00000452520 SRRM2Q9UQ35 2752 aaKnown RBP1.01□□□□□ -2.25
HMGB1P26-201ENST00000452520 H0Y9P7 68 aa1.01□□□□□ -2.25
HMGB1P26-201ENST00000452520 H3BUX3 64 aa1.01□□□□□ -2.25
HMGB1P26-201ENST00000452520 I3L2K1 104 aa1.01□□□□□ -2.25
HMGB1P26-201ENST00000452520 SMR3BP02814 79 aaPredicted RBP1.01□□□□□ -2.25
HMGB1P26-201ENST00000452520 ALKAL2Q6UX46 152 aa1.01□□□□□ -2.25
HMGB1P26-201ENST00000452520 WFDC9Q8NEX5 89 aa1.01□□□□□ -2.25
HMGB1P26-201ENST00000452520 DNAH2Q9P225 4427 aa1.01□□□□□ -2.25
HMGB1P26-201ENST00000452520 HECTD4Q9Y4D8 3996 aa1.01□□□□□ -2.25
HMGB1P26-201ENST00000452520 LYSTQ99698 3801 aa1□□□□□ -2.25
HMGB1P26-201ENST00000452520 DNAH7Q8WXX0 4024 aa1□□□□□ -2.25
HMGB1P26-201ENST00000452520 DNAH11Q96DT5 4516 aa1□□□□□ -2.25
HMGB1P26-201ENST00000452520 GNGT1P63211 74 aa1□□□□□ -2.25
HMGB1P26-201ENST00000452520 FAT1Q14517 4588 aa1□□□□□ -2.25
HMGB1P26-201ENST00000452520 PKHD1P08F94 4074 aa0.99□□□□□ -2.25
HMGB1P26-201ENST00000452520 MYCBP2O75592 4640 aa0.99□□□□□ -2.25
HMGB1P26-201ENST00000452520 LINC00959A0A1B0GUT2 108 aa0.99□□□□□ -2.25
HMGB1P26-201ENST00000452520 DEFB136Q30KP8 78 aa0.99□□□□□ -2.25
HMGB1P26-201ENST00000452520 RABAC1Q9UI14 185 aa0.99□□□□□ -2.25
HMGB1P26-201ENST00000452520 APOBP04114 4563 aaKnown RBP0.99□□□□□ -2.25
HMGB1P26-201ENST00000452520 HMCN2Q8NDA2 5059 aa0.98□□□□□ -2.25
HMGB1P26-201ENST00000452520 LRP1BQ9NZR2 4599 aa0.98□□□□□ -2.25
HMGB1P26-201ENST00000452520 HMGN2P05204 90 aaKnown RBP0.98□□□□□ -2.25
HMGB1P26-201ENST00000452520 Q5VSD8 79 aa0.98□□□□□ -2.25
HMGB1P26-201ENST00000452520 C6orf201Q7Z4U5 140 aa0.98□□□□□ -2.25
HMGB1P26-201ENST00000452520 RNF213Q63HN8 5207 aa0.98□□□□□ -2.25
HMGB1P26-201ENST00000452520 DNAH6Q9C0G6 4158 aa0.97□□□□□ -2.25
HMGB1P26-201ENST00000452520 DNAH5Q8TE73 4624 aa0.97□□□□□ -2.25
HMGB1P26-201ENST00000452520 FSIP2Q5CZC0 6907 aa0.97□□□□□ -2.25
HMGB1P26-201ENST00000452520 TRBV7-4A0A0J9YYF1 115 aa0.97□□□□□ -2.25
HMGB1P26-201ENST00000452520 A0A1B0GU69 56 aa0.97□□□□□ -2.25
HMGB1P26-201ENST00000452520 KRTAP2-3P0C7H8 128 aa0.97□□□□□ -2.25
HMGB1P26-201ENST00000452520 KRTAP2-4Q9BYR9 128 aa0.97□□□□□ -2.25
HMGB1P26-201ENST00000452520 KRTAP2-1Q9BYU5 128 aa0.97□□□□□ -2.25
HMGB1P26-201ENST00000452520 HILPDAQ9Y5L2 63 aa0.97□□□□□ -2.25
HMGB1P26-201ENST00000452520 TNCP24821 2201 aa0.96□□□□□ -2.26
HMGB1P26-201ENST00000452520 DEFB4AO15263 64 aa0.96□□□□□ -2.26
HMGB1P26-201ENST00000452520 PRH1P02810 166 aa0.96□□□□□ -2.26
HMGB1P26-201ENST00000452520 PIGYQ3MUY2 71 aa0.96□□□□□ -2.26
HMGB1P26-201ENST00000452520 NMSQ5H8A3 153 aa0.96□□□□□ -2.26
HMGB1P26-201ENST00000452520 KRTAP5-10Q6L8G5 202 aa0.96□□□□□ -2.26
HMGB1P26-201ENST00000452520 Q8IZM0 81 aa0.96□□□□□ -2.26
HMGB1P26-201ENST00000452520 VPS13BQ7Z7G8 4022 aa0.96□□□□□ -2.26
HMGB1P26-201ENST00000452520 PKD1P98161 4303 aa0.96□□□□□ -2.26
HMGB1P26-201ENST00000452520 LRP2P98164 4655 aa0.95□□□□□ -2.26
HMGB1P26-201ENST00000452520 DMBT1Q9UGM3 2413 aaPredicted RBP0.95□□□□□ -2.26
HMGB1P26-201ENST00000452520 PKHD1L1Q86WI1 4243 aa0.95□□□□□ -2.26
HMGB1P26-201ENST00000452520 SPINK6Q6UWN8 80 aa0.95□□□□□ -2.26
HMGB1P26-201ENST00000452520 APLNQ9ULZ1 77 aa0.95□□□□□ -2.26
HMGB1P26-201ENST00000452520 FAT4Q6V0I7 4981 aa0.95□□□□□ -2.26
HMGB1P26-201ENST00000452520 IQCF6A8MYZ5 107 aa0.94□□□□□ -2.26
HMGB1P26-201ENST00000452520 WFDC2Q14508 124 aa0.94□□□□□ -2.26
HMGB1P26-201ENST00000452520 RPS27LQ71UM5 84 aaKnown RBP0.94□□□□□ -2.26
HMGB1P26-201ENST00000452520 HTN3P15516 51 aa0.93□□□□□ -2.26
HMGB1P26-201ENST00000452520 DEFB135Q30KP9 77 aa0.93□□□□□ -2.26
HMGB1P26-201ENST00000452520 FAT3Q8TDW7 4589 aa0.93□□□□□ -2.26
HMGB1P26-201ENST00000452520 LRP1Q07954 4544 aaKnown RBP0.92□□□□□ -2.26
HMGB1P26-201ENST00000452520 FXYD6-FXYD2A0A087WZ82 144 aa0.92□□□□□ -2.26
HMGB1P26-201ENST00000452520 IGLC2P0DOY2 106 aa0.92□□□□□ -2.26
HMGB1P26-201ENST00000452520 IGLC3P0DOY3 106 aa0.92□□□□□ -2.26
HMGB1P26-201ENST00000452520 LELP1Q5T871 98 aa0.92□□□□□ -2.26
HMGB1P26-201ENST00000452520 LINC00643Q86TS7 51 aa0.92□□□□□ -2.26
HMGB1P26-201ENST00000452520 DEFB104AQ8WTQ1 72 aa0.92□□□□□ -2.26
HMGB1P26-201ENST00000452520 UBE2D4Q9Y2X8 147 aa0.92□□□□□ -2.26
HMGB1P26-201ENST00000452520 LPAP08519 4548 aa0.91□□□□□ -2.26
HMGB1P26-201ENST00000452520 DEFB131BA0A096LNP1 70 aa0.91□□□□□ -2.26
HMGB1P26-201ENST00000452520 M0R1W7 72 aa0.91□□□□□ -2.26
HMGB1P26-201ENST00000452520 MUC2Q02817 5179 aa0.91□□□□□ -2.26
HMGB1P26-201ENST00000452520 DEFA5Q01523 94 aa0.9□□□□□ -2.27
HMGB1P26-201ENST00000452520 LEAP2Q969E1 77 aa0.9□□□□□ -2.27
HMGB1P26-201ENST00000452520 GAFA1Q96PS6 74 aa0.9□□□□□ -2.27
HMGB1P26-201ENST00000452520 S100A13Q99584 98 aa0.9□□□□□ -2.27
HMGB1P26-201ENST00000452520 MYMXA0A1B0GTQ4 84 aa0.89□□□□□ -2.27
Retrieved 100 of 20,778 RNA–protein pairs in 73.1 ms