RNA–Protein interactions for RNA: ENST00000451903.2

CPS1-204, Transcript of carbamoyl-phosphate synthase 1, humanhuman

TSL 1 (best) BASIC

Gene CPS1, Length 4,770 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPS1-204ENST00000451903 KMT2BQ9UMN6 2715 aaPredicted RBP3.23□□□□□ -1.89
CPS1-204ENST00000451903 TEX15Q9BXT5 2789 aa3.22□□□□□ -1.89
CPS1-204ENST00000451903 MYO15AQ9UKN7 3530 aa3.22□□□□□ -1.89
CPS1-204ENST00000451903 KRTAP10-3P60369 221 aa3.21□□□□□ -1.9
CPS1-204ENST00000451903 KRTAP12-1P59990 96 aa3.21□□□□□ -1.9
CPS1-204ENST00000451903 KRTAP13-4Q3LI77 160 aa3.2□□□□□ -1.9
CPS1-204ENST00000451903 CENPEQ02224 2701 aa3.2□□□□□ -1.9
CPS1-204ENST00000451903 TRIOO75962 3097 aa3.2□□□□□ -1.9
CPS1-204ENST00000451903 LAMA1P25391 3075 aa3.2□□□□□ -1.9
CPS1-204ENST00000451903 FRYQ5TBA9 3013 aa3.17□□□□□ -1.9
CPS1-204ENST00000451903 TENM4Q6N022 2769 aa3.17□□□□□ -1.9
CPS1-204ENST00000451903 KRTAP13-2Q52LG2 175 aa3.15□□□□□ -1.9
CPS1-204ENST00000451903 DCHS1Q96JQ0 3298 aa3.15□□□□□ -1.91
CPS1-204ENST00000451903 NBEAQ8NFP9 2946 aa3.14□□□□□ -1.91
CPS1-204ENST00000451903 VPS13AQ96RL7 3174 aa3.13□□□□□ -1.91
CPS1-204ENST00000451903 FRYLO94915 3013 aa3.13□□□□□ -1.91
CPS1-204ENST00000451903 UTP20O75691 2785 aaKnown RBP3.12□□□□□ -1.91
CPS1-204ENST00000451903 MAP1AP78559 2803 aaPredicted RBP3.12□□□□□ -1.91
CPS1-204ENST00000451903 CELSR3Q9NYQ7 3312 aa3.12□□□□□ -1.91
CPS1-204ENST00000451903 FREM2Q5SZK8 3169 aa3.1□□□□□ -1.91
CPS1-204ENST00000451903 NSD1Q96L73 2696 aaPredicted RBP3.09□□□□□ -1.91
CPS1-204ENST00000451903 ITPR1Q14643 2758 aa3.09□□□□□ -1.92
CPS1-204ENST00000451903 SPENQ96T58 3664 aaKnown RBP3.07□□□□□ -1.92
CPS1-204ENST00000451903 KRTAP1-5Q9BYS1 174 aa3.07□□□□□ -1.92
CPS1-204ENST00000451903 MGAQ8IWI9 3026 aa3.07□□□□□ -1.92
CPS1-204ENST00000451903 WDFY4Q6ZS81 3184 aa3.07□□□□□ -1.92
CPS1-204ENST00000451903 RELNP78509 3460 aa3.07□□□□□ -1.92
CPS1-204ENST00000451903 ASPMQ8IZT6 3477 aa3.07□□□□□ -1.92
CPS1-204ENST00000451903 KRTAP10-6P60371 365 aaPredicted RBP3.06□□□□□ -1.92
CPS1-204ENST00000451903 UBR5O95071 2799 aaPredicted RBP3.06□□□□□ -1.92
CPS1-204ENST00000451903 ITPR2Q14571 2701 aa3.05□□□□□ -1.92
CPS1-204ENST00000451903 DSPP15924 2871 aaKnown RBP3.04□□□□□ -1.92
CPS1-204ENST00000451903 AKAP13Q12802 2813 aa3.03□□□□□ -1.92
CPS1-204ENST00000451903 KRTAP10-1P60331 282 aa3.03□□□□□ -1.92
CPS1-204ENST00000451903 DMXL1Q9Y485 3027 aa3.02□□□□□ -1.93
CPS1-204ENST00000451903 HIVEP1P15822 2718 aa3□□□□□ -1.93
CPS1-204ENST00000451903 KRTAP3-1Q9BYR8 98 aa2.99□□□□□ -1.93
CPS1-204ENST00000451903 NBPF19A0A087WUL8 3843 aa2.99□□□□□ -1.93
CPS1-204ENST00000451903 KRTAP10-2P60368 255 aa2.99□□□□□ -1.93
CPS1-204ENST00000451903 CFAP47Q6ZTR5 3102 aa2.98□□□□□ -1.93
CPS1-204ENST00000451903 LOC400499M0QZD8 3231 aa2.97□□□□□ -1.93
CPS1-204ENST00000451903 KALRNO60229 2985 aa2.96□□□□□ -1.94
CPS1-204ENST00000451903 KRTAP3-2Q9BYR7 98 aa2.96□□□□□ -1.94
CPS1-204ENST00000451903 BSNQ9UPA5 3926 aa2.95□□□□□ -1.94
CPS1-204ENST00000451903 DMXL2Q8TDJ6 3036 aa2.95□□□□□ -1.94
CPS1-204ENST00000451903 ADGRG4Q8IZF6 3080 aa2.94□□□□□ -1.94
CPS1-204ENST00000451903 TACC2O95359 2948 aa2.93□□□□□ -1.94
CPS1-204ENST00000451903 ZZEF1O43149 2961 aa2.92□□□□□ -1.94
CPS1-204ENST00000451903 ASH1LQ9NR48 2969 aaKnown RBP2.92□□□□□ -1.94
CPS1-204ENST00000451903 LAMA5O15230 3695 aa2.92□□□□□ -1.94
CPS1-204ENST00000451903 BOD1L1Q8NFC6 3051 aa2.92□□□□□ -1.94
CPS1-204ENST00000451903 ATMQ13315 3056 aa2.91□□□□□ -1.94
CPS1-204ENST00000451903 LRBAP50851 2863 aa2.9□□□□□ -1.95
CPS1-204ENST00000451903 SMG1Q96Q15 3661 aaKnown RBP2.89□□□□□ -1.95
CPS1-204ENST00000451903 CELSR2Q9HCU4 2923 aa2.88□□□□□ -1.95
CPS1-204ENST00000451903 HRNRQ86YZ3 2850 aaPredicted RBP2.88□□□□□ -1.95
CPS1-204ENST00000451903 AKAP9Q99996 3911 aa2.88□□□□□ -1.95
CPS1-204ENST00000451903 TENM2Q9NT68 2774 aa2.88□□□□□ -1.95
CPS1-204ENST00000451903 TGP01266 2768 aa2.87□□□□□ -1.95
CPS1-204ENST00000451903 SRRM2Q9UQ35 2752 aaKnown RBP2.87□□□□□ -1.95
CPS1-204ENST00000451903 NBEAL2Q6ZNJ1 2754 aa2.87□□□□□ -1.95
CPS1-204ENST00000451903 DNHD1Q96M86 4753 aa2.86□□□□□ -1.95
CPS1-204ENST00000451903 CSMD1Q96PZ7 3565 aa2.86□□□□□ -1.95
CPS1-204ENST00000451903 KRTAP1-4P0C5Y4 121 aa2.85□□□□□ -1.95
CPS1-204ENST00000451903 APCP25054 2843 aa2.85□□□□□ -1.95
CPS1-204ENST00000451903 TENM3Q9P273 2699 aa2.84□□□□□ -1.95
CPS1-204ENST00000451903 KRTAP3-3Q9BYR6 98 aa2.84□□□□□ -1.96
CPS1-204ENST00000451903 KRTAP17-1Q9BYP8 105 aa2.82□□□□□ -1.96
CPS1-204ENST00000451903 COL12A1Q99715 3063 aa2.81□□□□□ -1.96
CPS1-204ENST00000451903 DCHS2Q6V1P9 2916 aa2.81□□□□□ -1.96
CPS1-204ENST00000451903 FBN3Q75N90 2809 aa2.79□□□□□ -1.96
CPS1-204ENST00000451903 ZANQ9Y493 2812 aa2.79□□□□□ -1.96
CPS1-204ENST00000451903 SVEP1Q4LDE5 3571 aa2.79□□□□□ -1.96
CPS1-204ENST00000451903 CUBNO60494 3623 aa2.78□□□□□ -1.96
CPS1-204ENST00000451903 PDZD2O15018 2839 aa2.78□□□□□ -1.96
CPS1-204ENST00000451903 VPS13CQ709C8 3753 aa2.77□□□□□ -1.97
CPS1-204ENST00000451903 NIPBLQ6KC79 2804 aaeCLIP2.77□□□□□ -1.97
CPS1-204ENST00000451903 CELSR1Q9NYQ6 3014 aa2.76□□□□□ -1.97
CPS1-204ENST00000451903 TENM1Q9UKZ4 2725 aa2.76□□□□□ -1.97
CPS1-204ENST00000451903 ANK2Q01484 3957 aa2.75□□□□□ -1.97
CPS1-204ENST00000451903 A0A1B0GVY2 172 aa2.74□□□□□ -1.97
CPS1-204ENST00000451903 KRTAP10-10P60014 251 aa2.74□□□□□ -1.97
CPS1-204ENST00000451903 MXRA5Q9NR99 2828 aa2.73□□□□□ -1.97
CPS1-204ENST00000451903 SPRR5A0A1B0GTR4 108 aa2.72□□□□□ -1.97
CPS1-204ENST00000451903 ALMS1Q8TCU4 4167 aa2.72□□□□□ -1.97
CPS1-204ENST00000451903 CRYBG3Q68DQ2 2970 aa2.71□□□□□ -1.98
CPS1-204ENST00000451903 FBN2P35556 2912 aa2.71□□□□□ -1.98
CPS1-204ENST00000451903 NF1P21359 2839 aa2.7□□□□□ -1.98
CPS1-204ENST00000451903 CMYA5Q8N3K9 4069 aa2.7□□□□□ -1.98
CPS1-204ENST00000451903 CSMD2Q7Z408 3487 aa2.69□□□□□ -1.98
CPS1-204ENST00000451903 LYSTQ99698 3801 aa2.68□□□□□ -1.98
CPS1-204ENST00000451903 OTOGQ6ZRI0 2925 aa2.68□□□□□ -1.98
CPS1-204ENST00000451903 RYR3Q15413 4870 aa2.67□□□□□ -1.98
CPS1-204ENST00000451903 ZNF469Q96JG9 3925 aaPredicted RBP2.65□□□□□ -1.99
CPS1-204ENST00000451903 ANK3Q12955 4377 aaKnown RBP2.64□□□□□ -1.99
CPS1-204ENST00000451903 KRTAP12-3P60328 96 aa2.63□□□□□ -1.99
CPS1-204ENST00000451903 KRTAP19-4Q3LI73 84 aa2.62□□□□□ -1.99
CPS1-204ENST00000451903 PKD1L1Q8TDX9 2849 aa2.61□□□□□ -1.99
CPS1-204ENST00000451903 MT3P25713 68 aa2.59□□□□□ -2
CPS1-204ENST00000451903 LCE3AQ5TA76 89 aa2.59□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 90.2 ms