RNA–Protein interactions for RNA: ENST00000451903.2

CPS1-204, Transcript of carbamoyl-phosphate synthase 1, humanhuman

TSL 1 (best) BASIC

Gene CPS1, Length 4,770 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPS1-204ENST00000451903 MYT1Q01538 1121 aa11.79□□□□□ -0.52
CPS1-204ENST00000451903 PELP1Q8IZL8 1130 aaKnown RBP11.62□□□□□ -0.55
CPS1-204ENST00000451903 TTBK1Q5TCY1 1321 aaPredicted RBP11.1□□□□□ -0.63
CPS1-204ENST00000451903 ERICH6Q7L0X2 663 aa10.9□□□□□ -0.66
CPS1-204ENST00000451903 SLC24A1O60721 1099 aa10.6□□□□□ -0.71
CPS1-204ENST00000451903 RANGAP1P46060 587 aaPredicted RBP10.23□□□□□ -0.77
CPS1-204ENST00000451903 CENPBP07199 599 aaPredicted RBP10.21□□□□□ -0.77
CPS1-204ENST00000451903 EIF5BO60841 1220 aaKnown RBP9.96□□□□□ -0.82
CPS1-204ENST00000451903 DAXXQ9UER7 740 aaPredicted RBP9.94□□□□□ -0.82
CPS1-204ENST00000451903 CCER1Q8TC90 406 aaPredicted RBP9.93□□□□□ -0.82
CPS1-204ENST00000451903 PRKCSHP14314 528 aaPredicted RBP9.9□□□□□ -0.83
CPS1-204ENST00000451903 YTHDC1Q96MU7 727 aaKnown RBP9.89□□□□□ -0.83
CPS1-204ENST00000451903 BCL11AQ9H165 835 aa9.84□□□□□ -0.83
CPS1-204ENST00000451903 GLIPR1L2Q4G1C9 344 aa9.81□□□□□ -0.84
CPS1-204ENST00000451903 HRCP23327 699 aa9.72□□□□□ -0.85
CPS1-204ENST00000451903 ZEB1P37275 1124 aaPredicted RBP9.7□□□□□ -0.86
CPS1-204ENST00000451903 APLP2Q06481 763 aa9.66□□□□□ -0.86
CPS1-204ENST00000451903 EHMT2Q96KQ7 1210 aa9.63□□□□□ -0.87
CPS1-204ENST00000451903 NEFLP07196 543 aa9.61□□□□□ -0.87
CPS1-204ENST00000451903 MYT1LQ9UL68 1186 aa9.61□□□□□ -0.87
CPS1-204ENST00000451903 PODXL2Q9NZ53 605 aa9.48□□□□□ -0.89
CPS1-204ENST00000451903 DCAF8L2P0C7V8 631 aa9.47□□□□□ -0.89
CPS1-204ENST00000451903 RTL5Q5HYW3 569 aaPredicted RBP9.46□□□□□ -0.89
CPS1-204ENST00000451903 CLSPNQ9HAW4 1339 aa9.46□□□□□ -0.9
CPS1-204ENST00000451903 ANP32EQ9BTT0 268 aa9.45□□□□□ -0.9
CPS1-204ENST00000451903 PCGF6Q9BYE7 350 aa9.43□□□□□ -0.9
CPS1-204ENST00000451903 GTF3C3Q9Y5Q9 886 aa9.42□□□□□ -0.9
CPS1-204ENST00000451903 ACIN1Q9UKV3 1341 aaKnown RBP9.36□□□□□ -0.91
CPS1-204ENST00000451903 SCAF1Q9H7N4 1312 aaKnown RBP9.35□□□□□ -0.91
CPS1-204ENST00000451903 FAM9AQ8IZU1 332 aaPredicted RBP9.35□□□□□ -0.91
CPS1-204ENST00000451903 POLR3GLQ9BT43 218 aa9.33□□□□□ -0.92
CPS1-204ENST00000451903 ZNF326Q5BKZ1 582 aaKnown RBP9.31□□□□□ -0.92
CPS1-204ENST00000451903 PKNOX2Q96KN3 472 aa9.29□□□□□ -0.92
CPS1-204ENST00000451903 NCBP3Q53F19 620 aaKnown RBP9.27□□□□□ -0.92
CPS1-204ENST00000451903 HOMEZQ8IX15 550 aa9.26□□□□□ -0.93
CPS1-204ENST00000451903 ARXQ96QS3 562 aa9.24□□□□□ -0.93
CPS1-204ENST00000451903 ERICH6BQ5W0A0 696 aa9.21□□□□□ -0.94
CPS1-204ENST00000451903 NISCHQ9Y2I1 1504 aa9.19□□□□□ -0.94
CPS1-204ENST00000451903 PPARGC1BQ86YN6 1023 aaKnown RBP9.19□□□□□ -0.94
CPS1-204ENST00000451903 NCLP19338 710 aaKnown RBP9.17□□□□□ -0.94
CPS1-204ENST00000451903 ZNF316A6NFI3 1004 aaPredicted RBP9.15□□□□□ -0.95
CPS1-204ENST00000451903 PDE4CQ08493 712 aa9.14□□□□□ -0.95
CPS1-204ENST00000451903 UBE2Q2Q8WVN8 375 aa9.13□□□□□ -0.95
CPS1-204ENST00000451903 CDK11BP21127 795 aaKnown RBP9.1□□□□□ -0.95
CPS1-204ENST00000451903 CDK11AQ9UQ88 783 aaPredicted RBP9.1□□□□□ -0.95
CPS1-204ENST00000451903 TULP1O00294 542 aaPredicted RBP9.08□□□□□ -0.96
CPS1-204ENST00000451903 C14orf37Q86TY3 774 aa9.08□□□□□ -0.96
CPS1-204ENST00000451903 AMER1Q5JTC6 1135 aaPredicted RBP9.08□□□□□ -0.96
CPS1-204ENST00000451903 TNNT2P45379 298 aaPredicted RBP9.07□□□□□ -0.96
CPS1-204ENST00000451903 PDIA4P13667 645 aaKnown RBP9.05□□□□□ -0.96
CPS1-204ENST00000451903 CSRNP3Q8WYN3 585 aa9.04□□□□□ -0.96
CPS1-204ENST00000451903 A0A0U1RQG5 324 aaPredicted RBP9.04□□□□□ -0.96
CPS1-204ENST00000451903 NPM2Q86SE8 214 aaKnown RBP9.04□□□□□ -0.96
CPS1-204ENST00000451903 RTN4Q9NQC3 1192 aaKnown RBP9.03□□□□□ -0.96
CPS1-204ENST00000451903 PLEKHG5O94827 1062 aa9□□□□□ -0.97
CPS1-204ENST00000451903 HAP1P54257 671 aaPredicted RBP9□□□□□ -0.97
CPS1-204ENST00000451903 DIEXFQ68CQ4 756 aaKnown RBP9□□□□□ -0.97
CPS1-204ENST00000451903 NEUROD1Q13562 356 aa8.99□□□□□ -0.97
CPS1-204ENST00000451903 NAP1L5Q96NT1 182 aaPredicted RBP8.99□□□□□ -0.97
CPS1-204ENST00000451903 PTMSP20962 102 aa8.98□□□□□ -0.97
CPS1-204ENST00000451903 HMGB1P09429 215 aaKnown RBP8.97□□□□□ -0.97
CPS1-204ENST00000451903 VSIG10Q8N0Z9 540 aa8.97□□□□□ -0.97
CPS1-204ENST00000451903 TRIM26Q12899 539 aaPredicted RBP8.96□□□□□ -0.98
CPS1-204ENST00000451903 TAF7LQ5H9L4 462 aa8.96□□□□□ -0.98
CPS1-204ENST00000451903 ANO8Q9HCE9 1232 aaPredicted RBP8.95□□□□□ -0.98
CPS1-204ENST00000451903 ZBTB4Q9P1Z0 1013 aaPredicted RBP8.93□□□□□ -0.98
CPS1-204ENST00000451903 CCDC136Q96JN2 1154 aa8.93□□□□□ -0.98
CPS1-204ENST00000451903 DEKP35659 375 aaKnown RBP8.93□□□□□ -0.98
CPS1-204ENST00000451903 CNGB1Q14028 1251 aaPredicted RBP8.93□□□□□ -0.98
CPS1-204ENST00000451903 TRIM44Q96DX7 344 aaPredicted RBP8.92□□□□□ -0.98
CPS1-204ENST00000451903 RSPH6AQ9H0K4 717 aa8.88□□□□□ -0.99
CPS1-204ENST00000451903 ANP32AP39687 249 aaKnown RBP8.87□□□□□ -0.99
CPS1-204ENST00000451903 PLPPR3Q6T4P5 718 aa8.87□□□□□ -0.99
CPS1-204ENST00000451903 KLHL34Q8N239 644 aa8.86□□□□□ -0.99
CPS1-204ENST00000451903 ANP32BQ92688 251 aaKnown RBP8.83□□□□□ -1
CPS1-204ENST00000451903 TPRNQ4KMQ1 711 aa8.82□□□□□ -1
CPS1-204ENST00000451903 BCANQ96GW7 911 aa8.82□□□□□ -1
CPS1-204ENST00000451903 HSP90AA1P07900 732 aaKnown RBP8.82□□□□□ -1
CPS1-204ENST00000451903 BRD2P25440 801 aaKnown RBP8.82□□□□□ -1
CPS1-204ENST00000451903 NBR1Q14596 966 aa8.82□□□□□ -1
CPS1-204ENST00000451903 TIMELESSQ9UNS1 1208 aa8.82□□□□□ -1
CPS1-204ENST00000451903 HSP90B1P14625 803 aaKnown RBP8.81□□□□□ -1
CPS1-204ENST00000451903 HSP90AA2PQ14568 343 aaPredicted RBP8.79□□□□□ -1
CPS1-204ENST00000451903 APPP05067 770 aa8.78□□□□□ -1
CPS1-204ENST00000451903 CANXP27824 592 aaKnown RBP8.78□□□□□ -1
CPS1-204ENST00000451903 NEFMP07197 916 aa8.76□□□□□ -1.01
CPS1-204ENST00000451903 SALL2Q9Y467 1007 aaPredicted RBP8.75□□□□□ -1.01
CPS1-204ENST00000451903 CCDC9Q9Y3X0 531 aaKnown RBP8.73□□□□□ -1.01
CPS1-204ENST00000451903 ZBTB47Q9UFB7 747 aaPredicted RBP8.73□□□□□ -1.01
CPS1-204ENST00000451903 FBXO3Q9UK99 471 aa8.72□□□□□ -1.01
CPS1-204ENST00000451903 PTMAP06454 111 aaKnown RBP8.7□□□□□ -1.02
CPS1-204ENST00000451903 ARID4BQ4LE39 1312 aaPredicted RBP8.69□□□□□ -1.02
CPS1-204ENST00000451903 BCL11BQ9C0K0 894 aaPredicted RBP8.68□□□□□ -1.02
CPS1-204ENST00000451903 TAOK2Q9UL54 1235 aa8.65□□□□□ -1.02
CPS1-204ENST00000451903 PAXIP1Q6ZW49 1069 aaPredicted RBP8.64□□□□□ -1.03
CPS1-204ENST00000451903 ZMYND15Q9H091 742 aa8.64□□□□□ -1.03
CPS1-204ENST00000451903 PPM1GO15355 546 aaPredicted RBP8.64□□□□□ -1.03
CPS1-204ENST00000451903 SUPT5HO00267 1087 aaKnown RBP8.63□□□□□ -1.03
CPS1-204ENST00000451903 PATL2C9JE40 543 aaKnown RBP8.63□□□□□ -1.03
CPS1-204ENST00000451903 DNTTIP2Q5QJE6 756 aaKnown RBP8.62□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms