RNA–Protein interactions for RNA: ENST00000449832.1

AC009961.3-201, humanhuman

BASIC

Gene AC009961.3, Length 765 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC009961.3-201ENST00000449832 UBR5O95071 2799 aaPredicted RBP1.35□□□□□ -2.19
AC009961.3-201ENST00000449832 LAMA1P25391 3075 aa1.34□□□□□ -2.19
AC009961.3-201ENST00000449832 SPG11Q96JI7 2443 aa1.34□□□□□ -2.19
AC009961.3-201ENST00000449832 Q6ZRN7 208 aaPredicted RBP1.34□□□□□ -2.19
AC009961.3-201ENST00000449832 DEFB119Q8N690 84 aa1.34□□□□□ -2.19
AC009961.3-201ENST00000449832 CSMD1Q96PZ7 3565 aa1.34□□□□□ -2.2
AC009961.3-201ENST00000449832 CCDC168Q8NDH2 2452 aa1.33□□□□□ -2.2
AC009961.3-201ENST00000449832 NBPF19A0A087WUL8 3843 aa1.33□□□□□ -2.2
AC009961.3-201ENST00000449832 RELNP78509 3460 aa1.33□□□□□ -2.2
AC009961.3-201ENST00000449832 H3BUX3 64 aa1.33□□□□□ -2.2
AC009961.3-201ENST00000449832 BRCA2P51587 3418 aa1.33□□□□□ -2.2
AC009961.3-201ENST00000449832 BAHCC1Q9P281 2608 aa1.33□□□□□ -2.2
AC009961.3-201ENST00000449832 LOC400499M0QZD8 3231 aa1.32□□□□□ -2.2
AC009961.3-201ENST00000449832 DNAH1Q9P2D7 4330 aa1.32□□□□□ -2.2
AC009961.3-201ENST00000449832 VCANP13611 3396 aa1.32□□□□□ -2.2
AC009961.3-201ENST00000449832 TRANK1O15050 2925 aa1.32□□□□□ -2.2
AC009961.3-201ENST00000449832 RPL37P61927 97 aaKnown RBP1.32□□□□□ -2.2
AC009961.3-201ENST00000449832 CDH23Q9H251 3354 aa1.32□□□□□ -2.2
AC009961.3-201ENST00000449832 SPENQ96T58 3664 aaKnown RBP1.31□□□□□ -2.2
AC009961.3-201ENST00000449832 PTPN13Q12923 2485 aa1.31□□□□□ -2.2
AC009961.3-201ENST00000449832 HRNRQ86YZ3 2850 aaPredicted RBP1.31□□□□□ -2.2
AC009961.3-201ENST00000449832 INE1O15225 51 aa1.31□□□□□ -2.2
AC009961.3-201ENST00000449832 PRLHP81277 87 aa1.31□□□□□ -2.2
AC009961.3-201ENST00000449832 C10orf99Q6UWK7 81 aa1.31□□□□□ -2.2
AC009961.3-201ENST00000449832 DEFB123Q8N688 67 aa1.31□□□□□ -2.2
AC009961.3-201ENST00000449832 PLAC4Q8WY50 150 aa1.31□□□□□ -2.2
AC009961.3-201ENST00000449832 PRO0255Q9UI72 69 aa1.31□□□□□ -2.2
AC009961.3-201ENST00000449832 R4GN34 69 aa1.31□□□□□ -2.2
AC009961.3-201ENST00000449832 J3QKU1 62 aa1.3□□□□□ -2.2
AC009961.3-201ENST00000449832 DMXL2Q8TDJ6 3036 aa1.3□□□□□ -2.2
AC009961.3-201ENST00000449832 ANKHD1Q8IWZ3 2542 aaKnown RBP1.3□□□□□ -2.2
AC009961.3-201ENST00000449832 SMG1Q96Q15 3661 aaKnown RBP1.3□□□□□ -2.2
AC009961.3-201ENST00000449832 REV3LO60673 3130 aa1.3□□□□□ -2.2
AC009961.3-201ENST00000449832 ATMQ13315 3056 aa1.29□□□□□ -2.2
AC009961.3-201ENST00000449832 COL12A1Q99715 3063 aa1.29□□□□□ -2.2
AC009961.3-201ENST00000449832 HIVEP3Q5T1R4 2406 aa1.29□□□□□ -2.2
AC009961.3-201ENST00000449832 FAM208BQ5VWN6 2430 aa1.29□□□□□ -2.2
AC009961.3-201ENST00000449832 MYO15AQ9UKN7 3530 aa1.29□□□□□ -2.2
AC009961.3-201ENST00000449832 APCP25054 2843 aa1.29□□□□□ -2.2
AC009961.3-201ENST00000449832 F8P00451 2351 aa1.28□□□□□ -2.2
AC009961.3-201ENST00000449832 CHD9Q3L8U1 2897 aa1.28□□□□□ -2.2
AC009961.3-201ENST00000449832 CRYBG3Q68DQ2 2970 aa1.28□□□□□ -2.2
AC009961.3-201ENST00000449832 CELSR1Q9NYQ6 3014 aa1.28□□□□□ -2.2
AC009961.3-201ENST00000449832 CELSR3Q9NYQ7 3312 aa1.28□□□□□ -2.2
AC009961.3-201ENST00000449832 A0A096LPF7 62 aa1.28□□□□□ -2.2
AC009961.3-201ENST00000449832 TLN1Q9Y490 2541 aaKnown RBP1.28□□□□□ -2.2
AC009961.3-201ENST00000449832 SETXQ7Z333 2677 aaKnown RBP1.28□□□□□ -2.2
AC009961.3-201ENST00000449832 VWFP04275 2813 aa1.28□□□□□ -2.2
AC009961.3-201ENST00000449832 MEGF8Q7Z7M0 2845 aa1.28□□□□□ -2.2
AC009961.3-201ENST00000449832 BSNQ9UPA5 3926 aa1.28□□□□□ -2.21
AC009961.3-201ENST00000449832 LAMA5O15230 3695 aa1.27□□□□□ -2.21
AC009961.3-201ENST00000449832 DCHS2Q6V1P9 2916 aa1.27□□□□□ -2.21
AC009961.3-201ENST00000449832 LRBAP50851 2863 aa1.27□□□□□ -2.21
AC009961.3-201ENST00000449832 PRRC2CQ9Y520 2896 aaKnown RBP1.27□□□□□ -2.21
AC009961.3-201ENST00000449832 S4R3F8 94 aa1.27□□□□□ -2.21
AC009961.3-201ENST00000449832 ASPMQ8IZT6 3477 aa1.27□□□□□ -2.21
AC009961.3-201ENST00000449832 ANK3Q12955 4377 aaKnown RBP1.27□□□□□ -2.21
AC009961.3-201ENST00000449832 NAV2Q8IVL1 2488 aa1.27□□□□□ -2.21
AC009961.3-201ENST00000449832 TLN2Q9Y4G6 2542 aa1.26□□□□□ -2.21
AC009961.3-201ENST00000449832 DMXL1Q9Y485 3027 aa1.26□□□□□ -2.21
AC009961.3-201ENST00000449832 SPINK1P00995 79 aa1.26□□□□□ -2.21
AC009961.3-201ENST00000449832 COL6A5A8TX70 2615 aa1.26□□□□□ -2.21
AC009961.3-201ENST00000449832 SPTAN1Q13813 2472 aaKnown RBP1.26□□□□□ -2.21
AC009961.3-201ENST00000449832 RIF1Q5UIP0 2472 aaKnown RBP1.26□□□□□ -2.21
AC009961.3-201ENST00000449832 DNAH11Q96DT5 4516 aa1.26□□□□□ -2.21
AC009961.3-201ENST00000449832 JMJD1CQ15652 2540 aa1.25□□□□□ -2.21
AC009961.3-201ENST00000449832 KRTAP12-1P59990 96 aa1.25□□□□□ -2.21
AC009961.3-201ENST00000449832 ANK2Q01484 3957 aa1.25□□□□□ -2.21
AC009961.3-201ENST00000449832 CREBBPQ92793 2442 aa1.24□□□□□ -2.21
AC009961.3-201ENST00000449832 A0A096LNI7 61 aa1.24□□□□□ -2.21
AC009961.3-201ENST00000449832 LINC01556Q5JQF7 62 aa1.24□□□□□ -2.21
AC009961.3-201ENST00000449832 DEFB124Q8NES8 71 aa1.24□□□□□ -2.21
AC009961.3-201ENST00000449832 CSMD3Q7Z407 3707 aa1.24□□□□□ -2.21
AC009961.3-201ENST00000449832 CEP290O15078 2479 aa1.24□□□□□ -2.21
AC009961.3-201ENST00000449832 TACC2O95359 2948 aa1.23□□□□□ -2.21
AC009961.3-201ENST00000449832 USP9XQ93008 2570 aaPredicted RBP1.23□□□□□ -2.21
AC009961.3-201ENST00000449832 UTP20O75691 2785 aaKnown RBP1.23□□□□□ -2.21
AC009961.3-201ENST00000449832 TEX15Q9BXT5 2789 aa1.23□□□□□ -2.21
AC009961.3-201ENST00000449832 TTC28Q96AY4 2481 aa1.23□□□□□ -2.21
AC009961.3-201ENST00000449832 H3BNG1 76 aa1.23□□□□□ -2.21
AC009961.3-201ENST00000449832 FRAS1Q86XX4 4008 aa1.23□□□□□ -2.21
AC009961.3-201ENST00000449832 CUBNO60494 3623 aa1.23□□□□□ -2.21
AC009961.3-201ENST00000449832 TRRAPQ9Y4A5 3859 aa1.23□□□□□ -2.21
AC009961.3-201ENST00000449832 PRKDCP78527 4128 aaKnown RBP1.23□□□□□ -2.21
AC009961.3-201ENST00000449832 DOPEY1Q5JWR5 2465 aa1.23□□□□□ -2.21
AC009961.3-201ENST00000449832 DNAH8Q96JB1 4490 aa1.22□□□□□ -2.21
AC009961.3-201ENST00000449832 HUWE1Q7Z6Z7 4374 aaKnown RBP1.22□□□□□ -2.21
AC009961.3-201ENST00000449832 UBE2DNLQ8IWF7 75 aa1.22□□□□□ -2.21
AC009961.3-201ENST00000449832 SETD2Q9BYW2 2564 aaPredicted RBP1.22□□□□□ -2.21
AC009961.3-201ENST00000449832 TENM1Q9UKZ4 2725 aa1.22□□□□□ -2.21
AC009961.3-201ENST00000449832 NF1P21359 2839 aa1.21□□□□□ -2.22
AC009961.3-201ENST00000449832 DNAH2Q9P225 4427 aa1.2□□□□□ -2.22
AC009961.3-201ENST00000449832 DYNC2H1Q8NCM8 4307 aaKnown RBP1.2□□□□□ -2.22
AC009961.3-201ENST00000449832 A0A0D9SG42 100 aa1.2□□□□□ -2.22
AC009961.3-201ENST00000449832 CHD8Q9HCK8 2581 aa1.2□□□□□ -2.22
AC009961.3-201ENST00000449832 PIEZO1Q92508 2521 aa1.2□□□□□ -2.22
AC009961.3-201ENST00000449832 HECTD1Q9ULT8 2610 aa1.19□□□□□ -2.22
AC009961.3-201ENST00000449832 MYCBP2O75592 4640 aa1.19□□□□□ -2.22
AC009961.3-201ENST00000449832 MUC3AQ02505 3323 aa1.19□□□□□ -2.22
AC009961.3-201ENST00000449832 DNAH6Q9C0G6 4158 aa1.19□□□□□ -2.22
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms