RNA–Protein interactions for RNA: ENST00000449476.6

CTC1-202, Transcript of CST telomere replication complex component 1, humanhuman

TSL 2

Gene CTC1, Length 4,797 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1-202ENST00000449476 LINC01554Q52M75 96 aa6.19□□□□□ -1.42
CTC1-202ENST00000449476 TENM4Q6N022 2769 aa6.19□□□□□ -1.42
CTC1-202ENST00000449476 CRYBG3Q68DQ2 2970 aa6.18□□□□□ -1.42
CTC1-202ENST00000449476 RELNP78509 3460 aa6.17□□□□□ -1.42
CTC1-202ENST00000449476 Q6ZR54 194 aa6.16□□□□□ -1.42
CTC1-202ENST00000449476 Q6ZSA8 131 aa6.16□□□□□ -1.42
CTC1-202ENST00000449476 KRTAP7-1Q8IUC3 87 aa6.16□□□□□ -1.42
CTC1-202ENST00000449476 KRTAP11-1Q8IUC1 163 aa6.15□□□□□ -1.42
CTC1-202ENST00000449476 SPINK7P58062 85 aa6.15□□□□□ -1.43
CTC1-202ENST00000449476 A0A087X002 238 aa6.11□□□□□ -1.43
CTC1-202ENST00000449476 Q6ZRN7 208 aaPredicted RBP6.1□□□□□ -1.43
CTC1-202ENST00000449476 DMAC1Q96GE9 116 aa6.1□□□□□ -1.43
CTC1-202ENST00000449476 NOTCH2NLQ7Z3S9 236 aa6.09□□□□□ -1.43
CTC1-202ENST00000449476 MXRA5Q9NR99 2828 aa6.07□□□□□ -1.44
CTC1-202ENST00000449476 LCE6AA0A183 80 aa6.07□□□□□ -1.44
CTC1-202ENST00000449476 PRAC1Q96KF2 57 aa6.06□□□□□ -1.44
CTC1-202ENST00000449476 CSAG1Q6PB30 78 aa6.04□□□□□ -1.44
CTC1-202ENST00000449476 SVEP1Q4LDE5 3571 aa6.04□□□□□ -1.44
CTC1-202ENST00000449476 S4R3F8 94 aa6.03□□□□□ -1.44
CTC1-202ENST00000449476 Q5VSD8 79 aa6.02□□□□□ -1.45
CTC1-202ENST00000449476 KRTAP13-1Q8IUC0 172 aa6.02□□□□□ -1.45
CTC1-202ENST00000449476 CELSR1Q9NYQ6 3014 aa6□□□□□ -1.45
CTC1-202ENST00000449476 ASB16-AS1Q495Z4 193 aa6□□□□□ -1.45
CTC1-202ENST00000449476 SPENQ96T58 3664 aaKnown RBP5.99□□□□□ -1.45
CTC1-202ENST00000449476 CAMK2N1Q7Z7J9 78 aa5.98□□□□□ -1.45
CTC1-202ENST00000449476 KRTAP13-2Q52LG2 175 aa5.94□□□□□ -1.46
CTC1-202ENST00000449476 TENM3Q9P273 2699 aa5.94□□□□□ -1.46
CTC1-202ENST00000449476 RPL37P61927 97 aaKnown RBP5.92□□□□□ -1.46
CTC1-202ENST00000449476 H1FX-AS1Q4G0G2 97 aa5.92□□□□□ -1.46
CTC1-202ENST00000449476 R4GN34 69 aa5.92□□□□□ -1.46
CTC1-202ENST00000449476 SEC61BP60468 96 aaKnown RBP5.91□□□□□ -1.46
CTC1-202ENST00000449476 RPS29P62273 56 aaKnown RBP5.89□□□□□ -1.47
CTC1-202ENST00000449476 M0R2T5 61 aa5.88□□□□□ -1.47
CTC1-202ENST00000449476 TENM1Q9UKZ4 2725 aa5.88□□□□□ -1.47
CTC1-202ENST00000449476 SPATA8Q6RVD6 105 aa5.88□□□□□ -1.47
CTC1-202ENST00000449476 LUZP6Q538Z0 58 aa5.87□□□□□ -1.47
CTC1-202ENST00000449476 A8MU10 97 aa5.84□□□□□ -1.47
CTC1-202ENST00000449476 ROMO1P60602 79 aa5.84□□□□□ -1.47
CTC1-202ENST00000449476 CUBNO60494 3623 aa5.84□□□□□ -1.48
CTC1-202ENST00000449476 M0QZ58 72 aa5.82□□□□□ -1.48
CTC1-202ENST00000449476 ADM2Q7Z4H4 148 aa5.8□□□□□ -1.48
CTC1-202ENST00000449476 A6NN06 94 aa5.79□□□□□ -1.48
CTC1-202ENST00000449476 PKD1L1Q8TDX9 2849 aa5.79□□□□□ -1.48
CTC1-202ENST00000449476 PDZD2O15018 2839 aa5.78□□□□□ -1.48
CTC1-202ENST00000449476 BSNQ9UPA5 3926 aa5.78□□□□□ -1.48
CTC1-202ENST00000449476 TENM2Q9NT68 2774 aa5.73□□□□□ -1.49
CTC1-202ENST00000449476 FBN1P35555 2871 aaKnown RBP5.73□□□□□ -1.49
CTC1-202ENST00000449476 TGP01266 2768 aa5.71□□□□□ -1.49
CTC1-202ENST00000449476 VWFP04275 2813 aa5.71□□□□□ -1.49
CTC1-202ENST00000449476 A8MUU9 505 aa5.71□□□□□ -1.5
CTC1-202ENST00000449476 KRTAP1-4P0C5Y4 121 aa5.71□□□□□ -1.5
CTC1-202ENST00000449476 H3BS24 57 aa5.7□□□□□ -1.5
CTC1-202ENST00000449476 C20orf166-AS1Q96NR2 134 aa5.68□□□□□ -1.5
CTC1-202ENST00000449476 KRTAP21-3Q3LHN1 58 aa5.68□□□□□ -1.5
CTC1-202ENST00000449476 OTOGQ6ZRI0 2925 aa5.64□□□□□ -1.51
CTC1-202ENST00000449476 KRTAP25-1Q3LHN0 102 aa5.64□□□□□ -1.51
CTC1-202ENST00000449476 CSMD2Q7Z408 3487 aa5.62□□□□□ -1.51
CTC1-202ENST00000449476 PLAC4Q8WY50 150 aa5.57□□□□□ -1.52
CTC1-202ENST00000449476 KRTAP16-1A8MUX0 517 aa5.56□□□□□ -1.52
CTC1-202ENST00000449476 ZFHX3Q15911 3703 aa5.55□□□□□ -1.52
CTC1-202ENST00000449476 A0A0A0MQY5 61 aa5.55□□□□□ -1.52
CTC1-202ENST00000449476 VPS13CQ709C8 3753 aa5.54□□□□□ -1.52
CTC1-202ENST00000449476 XP32Q5T750 250 aa5.53□□□□□ -1.52
CTC1-202ENST00000449476 NBPF19A0A087WUL8 3843 aa5.51□□□□□ -1.53
CTC1-202ENST00000449476 SRRM2Q9UQ35 2752 aaKnown RBP5.49□□□□□ -1.53
CTC1-202ENST00000449476 H0YAA0 97 aa5.47□□□□□ -1.53
CTC1-202ENST00000449476 KRTAP13-3Q3SY46 172 aa5.45□□□□□ -1.54
CTC1-202ENST00000449476 FBN3Q75N90 2809 aa5.44□□□□□ -1.54
CTC1-202ENST00000449476 NDUFAF8A1L188 74 aa5.39□□□□□ -1.55
CTC1-202ENST00000449476 TPRXLQ17RH7 258 aa5.39□□□□□ -1.55
CTC1-202ENST00000449476 TNP1P09430 55 aa5.37□□□□□ -1.55
CTC1-202ENST00000449476 C10orf95Q9H7T3 257 aa5.37□□□□□ -1.55
CTC1-202ENST00000449476 TRRAPQ9Y4A5 3859 aa5.35□□□□□ -1.55
CTC1-202ENST00000449476 P0C880 135 aa5.34□□□□□ -1.55
CTC1-202ENST00000449476 ANK3Q12955 4377 aaKnown RBP5.34□□□□□ -1.55
CTC1-202ENST00000449476 KRTAP10-8P60410 259 aa5.33□□□□□ -1.56
CTC1-202ENST00000449476 A0A1B0GVY2 172 aa5.33□□□□□ -1.56
CTC1-202ENST00000449476 MEGF8Q7Z7M0 2845 aa5.31□□□□□ -1.56
CTC1-202ENST00000449476 COL7A1Q02388 2944 aa5.3□□□□□ -1.56
CTC1-202ENST00000449476 ZNF469Q96JG9 3925 aaPredicted RBP5.27□□□□□ -1.57
CTC1-202ENST00000449476 PP632Q6XCG6 107 aa5.25□□□□□ -1.57
CTC1-202ENST00000449476 AKAP9Q99996 3911 aa5.25□□□□□ -1.57
CTC1-202ENST00000449476 KRTAP3-1Q9BYR8 98 aa5.18□□□□□ -1.58
CTC1-202ENST00000449476 KRTAP10-10P60014 251 aa5.13□□□□□ -1.59
CTC1-202ENST00000449476 KRTAP12-2P59991 146 aa5.11□□□□□ -1.59
CTC1-202ENST00000449476 CSMD3Q7Z407 3707 aa5.06□□□□□ -1.6
CTC1-202ENST00000449476 KRTAP12-1P59990 96 aa5.05□□□□□ -1.6
CTC1-202ENST00000449476 KRTAP10-6P60371 365 aaPredicted RBP5.01□□□□□ -1.61
CTC1-202ENST00000449476 KRTAP13-4Q3LI77 160 aa5□□□□□ -1.61
CTC1-202ENST00000449476 HUWE1Q7Z6Z7 4374 aaKnown RBP4.97□□□□□ -1.61
CTC1-202ENST00000449476 PRO2289Q9P1D8 64 aa4.97□□□□□ -1.61
CTC1-202ENST00000449476 MT1HL1P0DM35 61 aa4.93□□□□□ -1.62
CTC1-202ENST00000449476 KRTAP10-4P60372 401 aaPredicted RBP4.9□□□□□ -1.63
CTC1-202ENST00000449476 DNAH10Q8IVF4 4471 aa4.88□□□□□ -1.63
CTC1-202ENST00000449476 KRTAP3-3Q9BYR6 98 aa4.87□□□□□ -1.63
CTC1-202ENST00000449476 KRTAP3-2Q9BYR7 98 aa4.86□□□□□ -1.63
CTC1-202ENST00000449476 KRTAP4-5Q9BYR2 181 aa4.74□□□□□ -1.65
CTC1-202ENST00000449476 PLECQ15149 4684 aaKnown RBP4.74□□□□□ -1.65
CTC1-202ENST00000449476 DNAH9Q9NYC9 4486 aa4.74□□□□□ -1.65
CTC1-202ENST00000449476 DNAH1Q9P2D7 4330 aa4.72□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 84.1 ms