RNA–Protein interactions for RNA: ENST00000449049.7

SHMT2-203, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2 BASIC

Gene SHMT2, Length 2,121 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-203ENST00000449049 PDE6GP18545 87 aa8.15□□□□□ -1.1
SHMT2-203ENST00000449049 CD164Q04900 197 aa8.15□□□□□ -1.1
SHMT2-203ENST00000449049 Q6ZQT0 140 aa8.15□□□□□ -1.1
SHMT2-203ENST00000449049 A0A1W2PNM2 257 aa8.15□□□□□ -1.11
SHMT2-203ENST00000449049 MYCBP2O75592 4640 aa8.15□□□□□ -1.11
SHMT2-203ENST00000449049 TRAV7A0A075B6U4 112 aa8.14□□□□□ -1.11
SHMT2-203ENST00000449049 FLG2Q5D862 2391 aaPredicted RBP8.14□□□□□ -1.11
SHMT2-203ENST00000449049 SPAG11AQ6PDA7 123 aa8.13□□□□□ -1.11
SHMT2-203ENST00000449049 TNXBP22105 4242 aa8.12□□□□□ -1.11
SHMT2-203ENST00000449049 C4orf48Q5BLP8 95 aa8.12□□□□□ -1.11
SHMT2-203ENST00000449049 SPINK1P00995 79 aa8.11□□□□□ -1.11
SHMT2-203ENST00000449049 KLKP1Q107X0 134 aa8.11□□□□□ -1.11
SHMT2-203ENST00000449049 RPS29P62273 56 aaKnown RBP8.09□□□□□ -1.11
SHMT2-203ENST00000449049 ATP5EP56381 51 aaPredicted RBP8.09□□□□□ -1.11
SHMT2-203ENST00000449049 PCLOQ9Y6V0 5065 aa8.08□□□□□ -1.12
SHMT2-203ENST00000449049 J3QL48 77 aa8.08□□□□□ -1.12
SHMT2-203ENST00000449049 PMAIP1Q13794 54 aa8.08□□□□□ -1.12
SHMT2-203ENST00000449049 Q6ZVQ6 151 aa8.08□□□□□ -1.12
SHMT2-203ENST00000449049 CXCL6P80162 114 aa8.07□□□□□ -1.12
SHMT2-203ENST00000449049 A0A1B0GW54 56 aa8.06□□□□□ -1.12
SHMT2-203ENST00000449049 A0A087WSZ3 146 aa8.05□□□□□ -1.12
SHMT2-203ENST00000449049 NDUFC1O43677 76 aa8.05□□□□□ -1.12
SHMT2-203ENST00000449049 LIMD2Q9BT23 127 aa8.05□□□□□ -1.12
SHMT2-203ENST00000449049 PRR15Q8IV56 129 aa8.03□□□□□ -1.12
SHMT2-203ENST00000449049 SNURFQ9Y675 71 aa8.02□□□□□ -1.13
SHMT2-203ENST00000449049 ASB16-AS1Q495Z4 193 aa8.02□□□□□ -1.13
SHMT2-203ENST00000449049 MPLKIPQ8TAP9 179 aa7.96□□□□□ -1.14
SHMT2-203ENST00000449049 Q96NJ1 140 aa7.96□□□□□ -1.14
SHMT2-203ENST00000449049 LINC00472Q9H8W2 130 aa7.94□□□□□ -1.14
SHMT2-203ENST00000449049 NREPQ16612 68 aa7.94□□□□□ -1.14
SHMT2-203ENST00000449049 RETNLBQ9BQ08 111 aa7.93□□□□□ -1.14
SHMT2-203ENST00000449049 BPY2O14599 106 aa7.93□□□□□ -1.14
SHMT2-203ENST00000449049 TMEM254Q8TBM7 123 aa7.92□□□□□ -1.14
SHMT2-203ENST00000449049 DMBT1Q9UGM3 2413 aaPredicted RBP7.89□□□□□ -1.15
SHMT2-203ENST00000449049 DEFB116Q30KQ4 102 aa7.88□□□□□ -1.15
SHMT2-203ENST00000449049 IGKV4-1P06312 121 aa7.87□□□□□ -1.15
SHMT2-203ENST00000449049 OCR1Q9BZK8 76 aa7.87□□□□□ -1.15
SHMT2-203ENST00000449049 Q8N9L7 120 aa7.84□□□□□ -1.16
SHMT2-203ENST00000449049 PRR4Q16378 134 aa7.83□□□□□ -1.16
SHMT2-203ENST00000449049 Q1T7F1 81 aa7.82□□□□□ -1.16
SHMT2-203ENST00000449049 IGLV7-46A0A075B6I9 117 aa7.82□□□□□ -1.16
SHMT2-203ENST00000449049 DSCR10P59022 87 aa7.82□□□□□ -1.16
SHMT2-203ENST00000449049 A8MWP4 228 aa7.81□□□□□ -1.16
SHMT2-203ENST00000449049 A0A1B0GVX0 72 aa7.78□□□□□ -1.16
SHMT2-203ENST00000449049 NDUFB1O75438 58 aa7.78□□□□□ -1.16
SHMT2-203ENST00000449049 hDV103S1A0JD37 113 aa7.76□□□□□ -1.17
SHMT2-203ENST00000449049 K7EQZ3 153 aa7.76□□□□□ -1.17
SHMT2-203ENST00000449049 RBM12B-AS1Q9P1G2 102 aa7.76□□□□□ -1.17
SHMT2-203ENST00000449049 KRTAP13-3Q3SY46 172 aa7.76□□□□□ -1.17
SHMT2-203ENST00000449049 KTN1-AS1Q86SY8 53 aa7.76□□□□□ -1.17
SHMT2-203ENST00000449049 HERC1Q15751 4861 aa7.76□□□□□ -1.17
SHMT2-203ENST00000449049 TPRXLQ17RH7 258 aa7.75□□□□□ -1.17
SHMT2-203ENST00000449049 IGHV6-1A0A0B4J1U7 121 aa7.75□□□□□ -1.17
SHMT2-203ENST00000449049 C8orf87E5RJ46 101 aa7.73□□□□□ -1.17
SHMT2-203ENST00000449049 C9orf92A6NGG3 77 aa7.72□□□□□ -1.17
SHMT2-203ENST00000449049 NOTCH2NLQ7Z3S9 236 aa7.72□□□□□ -1.17
SHMT2-203ENST00000449049 LINC00313P59037 77 aa7.71□□□□□ -1.18
SHMT2-203ENST00000449049 ZCCHC13Q8WW36 166 aaKnown RBP7.7□□□□□ -1.18
SHMT2-203ENST00000449049 C8orf17Q9NRJ1 99 aa7.7□□□□□ -1.18
SHMT2-203ENST00000449049 TRAV22A0A0B4J277 110 aa7.69□□□□□ -1.18
SHMT2-203ENST00000449049 MMP24-AS1A0A0U1RRL7 71 aa7.69□□□□□ -1.18
SHMT2-203ENST00000449049 HMCN2Q8NDA2 5059 aa7.68□□□□□ -1.18
SHMT2-203ENST00000449049 PSPHP1O15172 72 aa7.68□□□□□ -1.18
SHMT2-203ENST00000449049 C1orf64Q8NEQ6 169 aa7.67□□□□□ -1.18
SHMT2-203ENST00000449049 KRTAP16-1A8MUX0 517 aa7.67□□□□□ -1.18
SHMT2-203ENST00000449049 NDUFS5O43920 106 aa7.66□□□□□ -1.18
SHMT2-203ENST00000449049 XP32Q5T750 250 aa7.65□□□□□ -1.18
SHMT2-203ENST00000449049 CYP4F30PQ9H0H9 118 aa7.64□□□□□ -1.19
SHMT2-203ENST00000449049 HCG22E2RYF7 251 aa7.63□□□□□ -1.19
SHMT2-203ENST00000449049 LPAP08519 4548 aa7.63□□□□□ -1.19
SHMT2-203ENST00000449049 CASC2Q6XLA1 102 aa7.61□□□□□ -1.19
SHMT2-203ENST00000449049 WFDC13Q8IUB5 93 aa7.61□□□□□ -1.19
SHMT2-203ENST00000449049 C20orf166-AS1Q96NR2 134 aa7.61□□□□□ -1.19
SHMT2-203ENST00000449049 A8MUN3 132 aa7.6□□□□□ -1.19
SHMT2-203ENST00000449049 MRPL34Q9BQ48 92 aaKnown RBP7.6□□□□□ -1.19
SHMT2-203ENST00000449049 A8MUU9 505 aa7.6□□□□□ -1.19
SHMT2-203ENST00000449049 Q5VV11 94 aa7.59□□□□□ -1.19
SHMT2-203ENST00000449049 A8MU10 97 aa7.58□□□□□ -1.2
SHMT2-203ENST00000449049 Q75L30 129 aa7.58□□□□□ -1.2
SHMT2-203ENST00000449049 Q8N9P0 234 aaPredicted RBP7.58□□□□□ -1.2
SHMT2-203ENST00000449049 RPL37P61927 97 aaKnown RBP7.57□□□□□ -1.2
SHMT2-203ENST00000449049 ATP11AUNQ6ZP68 121 aa7.57□□□□□ -1.2
SHMT2-203ENST00000449049 A6NN06 94 aa7.55□□□□□ -1.2
SHMT2-203ENST00000449049 MP68P56378 58 aa7.52□□□□□ -1.2
SHMT2-203ENST00000449049 LRP2P98164 4655 aa7.52□□□□□ -1.21
SHMT2-203ENST00000449049 CHKB-CPT1BH3BT56 60 aa7.52□□□□□ -1.21
SHMT2-203ENST00000449049 C7orf65Q6ZTY9 151 aa7.52□□□□□ -1.21
SHMT2-203ENST00000449049 SPTSSBQ8NFR3 76 aa7.51□□□□□ -1.21
SHMT2-203ENST00000449049 H3BS24 57 aa7.5□□□□□ -1.21
SHMT2-203ENST00000449049 SPANXA2-OT1Q8N9U9 137 aa7.49□□□□□ -1.21
SHMT2-203ENST00000449049 LCA10Q71F78 164 aa7.49□□□□□ -1.21
SHMT2-203ENST00000449049 H3BPC8 53 aa7.48□□□□□ -1.21
SHMT2-203ENST00000449049 SEC61BP60468 96 aaKnown RBP7.48□□□□□ -1.21
SHMT2-203ENST00000449049 LINC00208Q96KT6 92 aa7.48□□□□□ -1.21
SHMT2-203ENST00000449049 TP53AIP1Q9HCN2 124 aa7.46□□□□□ -1.22
SHMT2-203ENST00000449049 PCOTHQ58A44 107 aa7.45□□□□□ -1.22
SHMT2-203ENST00000449049 MUC17Q685J3 4493 aa7.43□□□□□ -1.22
SHMT2-203ENST00000449049 H0Y9P7 68 aa7.43□□□□□ -1.22
SHMT2-203ENST00000449049 PRR15LQ9BU68 103 aa7.43□□□□□ -1.22
SHMT2-203ENST00000449049 CDC42SE1Q9NRR8 79 aa7.42□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 184.2 ms