RNA–Protein interactions for RNA: ENST00000448611.6

LMNA-208, Transcript of lamin A/C, humanhuman

TSL 2 BASIC

Gene LMNA, Length 1,943 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-208ENST00000448611 TMEM258P61165 79 aa10.19□□□□□ -0.78
LMNA-208ENST00000448611 PRR26Q8N8Z3 221 aa10.19□□□□□ -0.78
LMNA-208ENST00000448611 H7BZZ5 65 aa10.18□□□□□ -0.78
LMNA-208ENST00000448611 C5orf47Q569G3 176 aa10.17□□□□□ -0.78
LMNA-208ENST00000448611 C1orf195Q5TG92 126 aa10.17□□□□□ -0.78
LMNA-208ENST00000448611 FAM229AH3BQW9 127 aa10.16□□□□□ -0.78
LMNA-208ENST00000448611 NOTCH2NLQ7Z3S9 236 aa10.16□□□□□ -0.78
LMNA-208ENST00000448611 LIMD2Q9BT23 127 aa10.16□□□□□ -0.78
LMNA-208ENST00000448611 HSPG2P98160 4391 aa10.15□□□□□ -0.78
LMNA-208ENST00000448611 C4orf48Q5BLP8 95 aa10.15□□□□□ -0.79
LMNA-208ENST00000448611 SPINK1P00995 79 aa10.14□□□□□ -0.79
LMNA-208ENST00000448611 NDUFC1O43677 76 aa10.13□□□□□ -0.79
LMNA-208ENST00000448611 Q5VSD8 79 aa10.13□□□□□ -0.79
LMNA-208ENST00000448611 RYR1P21817 5038 aa10.12□□□□□ -0.79
LMNA-208ENST00000448611 BIRC6Q9NR09 4857 aa10.11□□□□□ -0.79
LMNA-208ENST00000448611 Q8N1X5 172 aa10.11□□□□□ -0.79
LMNA-208ENST00000448611 KRTAP17-1Q9BYP8 105 aa10.11□□□□□ -0.79
LMNA-208ENST00000448611 ZCCHC13Q8WW36 166 aaKnown RBP10.11□□□□□ -0.79
LMNA-208ENST00000448611 LINC00304Q8N9R0 145 aa10.1□□□□□ -0.79
LMNA-208ENST00000448611 MRPL34Q9BQ48 92 aaKnown RBP10.09□□□□□ -0.79
LMNA-208ENST00000448611 C8orf87E5RJ46 101 aa10.07□□□□□ -0.8
LMNA-208ENST00000448611 RPS29P62273 56 aaKnown RBP10.07□□□□□ -0.8
LMNA-208ENST00000448611 MP68P56378 58 aa10.07□□□□□ -0.8
LMNA-208ENST00000448611 SPAG11AQ6PDA7 123 aa10.07□□□□□ -0.8
LMNA-208ENST00000448611 TP53AIP1Q9HCN2 124 aa10.06□□□□□ -0.8
LMNA-208ENST00000448611 PKHD1L1Q86WI1 4243 aa10.05□□□□□ -0.8
LMNA-208ENST00000448611 H0Y9P7 68 aa10.05□□□□□ -0.8
LMNA-208ENST00000448611 FAM236DA0A1B0GTK5 79 aa10.04□□□□□ -0.8
LMNA-208ENST00000448611 FAM236CP0DP71 79 aa10.04□□□□□ -0.8
LMNA-208ENST00000448611 TRAV22A0A0B4J277 110 aa10.03□□□□□ -0.8
LMNA-208ENST00000448611 H3BPC8 53 aa10.01□□□□□ -0.81
LMNA-208ENST00000448611 NDUFS5O43920 106 aa10.01□□□□□ -0.81
LMNA-208ENST00000448611 LINC00313P59037 77 aa10.01□□□□□ -0.81
LMNA-208ENST00000448611 LINC00208Q96KT6 92 aa10.01□□□□□ -0.81
LMNA-208ENST00000448611 KRTAP4-5Q9BYR2 181 aa9.99□□□□□ -0.81
LMNA-208ENST00000448611 RPS28P62857 69 aaKnown RBP9.95□□□□□ -0.82
LMNA-208ENST00000448611 C1orf64Q8NEQ6 169 aa9.95□□□□□ -0.82
LMNA-208ENST00000448611 KRTAP16-1A8MUX0 517 aa9.95□□□□□ -0.82
LMNA-208ENST00000448611 ATP5EP56381 51 aaPredicted RBP9.95□□□□□ -0.82
LMNA-208ENST00000448611 Q8N9P0 234 aaPredicted RBP9.93□□□□□ -0.82
LMNA-208ENST00000448611 KRTAP13-3Q3SY46 172 aa9.9□□□□□ -0.82
LMNA-208ENST00000448611 HERC2O95714 4834 aa9.9□□□□□ -0.83
LMNA-208ENST00000448611 Q5W150 140 aa9.9□□□□□ -0.83
LMNA-208ENST00000448611 OXTP01178 125 aa9.88□□□□□ -0.83
LMNA-208ENST00000448611 KRTAP10-8P60410 259 aa9.88□□□□□ -0.83
LMNA-208ENST00000448611 SERP1Q9Y6X1 66 aa9.87□□□□□ -0.83
LMNA-208ENST00000448611 FLG2Q5D862 2391 aaPredicted RBP9.83□□□□□ -0.84
LMNA-208ENST00000448611 LRP1Q07954 4544 aaKnown RBP9.83□□□□□ -0.84
LMNA-208ENST00000448611 TNXBP22105 4242 aa9.82□□□□□ -0.84
LMNA-208ENST00000448611 LOC101927531A0A1B0GV80 90 aa9.8□□□□□ -0.84
LMNA-208ENST00000448611 SPANXA2-OT1Q8N9U9 137 aa9.8□□□□□ -0.84
LMNA-208ENST00000448611 SVIPQ8NHG7 77 aa9.8□□□□□ -0.84
LMNA-208ENST00000448611 CYP4F30PQ9H0H9 118 aa9.8□□□□□ -0.84
LMNA-208ENST00000448611 RETNLBQ9BQ08 111 aa9.79□□□□□ -0.84
LMNA-208ENST00000448611 PRR4Q16378 134 aa9.78□□□□□ -0.84
LMNA-208ENST00000448611 PCOTHQ58A44 107 aa9.78□□□□□ -0.84
LMNA-208ENST00000448611 ABCA13Q86UQ4 5058 aa9.77□□□□□ -0.85
LMNA-208ENST00000448611 MYCBP2O75592 4640 aa9.76□□□□□ -0.85
LMNA-208ENST00000448611 FAT3Q8TDW7 4589 aa9.76□□□□□ -0.85
LMNA-208ENST00000448611 IGLV7-46A0A075B6I9 117 aa9.73□□□□□ -0.85
LMNA-208ENST00000448611 C9orf92A6NGG3 77 aa9.72□□□□□ -0.85
LMNA-208ENST00000448611 MT1HL1P0DM35 61 aa9.7□□□□□ -0.86
LMNA-208ENST00000448611 IGKV2-30P06310 120 aa9.69□□□□□ -0.86
LMNA-208ENST00000448611 PCLOQ9Y6V0 5065 aa9.68□□□□□ -0.86
LMNA-208ENST00000448611 C20orf166-AS1Q96NR2 134 aa9.67□□□□□ -0.86
LMNA-208ENST00000448611 A8MUU9 505 aa9.66□□□□□ -0.86
LMNA-208ENST00000448611 SMIM26A0A096LP01 95 aa9.63□□□□□ -0.87
LMNA-208ENST00000448611 J3QL48 77 aa9.63□□□□□ -0.87
LMNA-208ENST00000448611 FP248Q71RG6 208 aaPredicted RBP9.62□□□□□ -0.87
LMNA-208ENST00000448611 HRES1P13985 223 aa9.59□□□□□ -0.87
LMNA-208ENST00000448611 IGKV2D-30A0A075B6S6 120 aa9.58□□□□□ -0.88
LMNA-208ENST00000448611 DMBT1Q9UGM3 2413 aaPredicted RBP9.57□□□□□ -0.88
LMNA-208ENST00000448611 Q75L30 129 aa9.54□□□□□ -0.88
LMNA-208ENST00000448611 COA5Q86WW8 74 aa9.53□□□□□ -0.88
LMNA-208ENST00000448611 C7orf65Q6ZTY9 151 aa9.52□□□□□ -0.89
LMNA-208ENST00000448611 DMAC1Q96GE9 116 aa9.48□□□□□ -0.89
LMNA-208ENST00000448611 C4orf26Q17RF5 130 aa9.47□□□□□ -0.89
LMNA-208ENST00000448611 MPLKIPQ8TAP9 179 aa9.46□□□□□ -0.9
LMNA-208ENST00000448611 ACYP2P14621 99 aa9.43□□□□□ -0.9
LMNA-208ENST00000448611 XP32Q5T750 250 aa9.43□□□□□ -0.9
LMNA-208ENST00000448611 Q1T7F1 81 aa9.41□□□□□ -0.9
LMNA-208ENST00000448611 RPL37P61927 97 aaKnown RBP9.41□□□□□ -0.9
LMNA-208ENST00000448611 SPINK7P58062 85 aa9.39□□□□□ -0.91
LMNA-208ENST00000448611 ATP11AUNQ6ZP68 121 aa9.37□□□□□ -0.91
LMNA-208ENST00000448611 TPRXLQ17RH7 258 aa9.32□□□□□ -0.92
LMNA-208ENST00000448611 V9GYY9 64 aa9.32□□□□□ -0.92
LMNA-208ENST00000448611 HERC1Q15751 4861 aa9.31□□□□□ -0.92
LMNA-208ENST00000448611 A8MUN3 132 aa9.29□□□□□ -0.92
LMNA-208ENST00000448611 CHKB-CPT1BH3BT56 60 aa9.29□□□□□ -0.92
LMNA-208ENST00000448611 PSPHP1O15172 72 aa9.25□□□□□ -0.93
LMNA-208ENST00000448611 KRTAP3-1Q9BYR8 98 aa9.24□□□□□ -0.93
LMNA-208ENST00000448611 LINC01558Q9Y6Z2 57 aa9.22□□□□□ -0.93
LMNA-208ENST00000448611 PRR15LQ9BU68 103 aa9.18□□□□□ -0.94
LMNA-208ENST00000448611 COX6B2Q6YFQ2 88 aa9.17□□□□□ -0.94
LMNA-208ENST00000448611 Q5VV11 94 aa9.17□□□□□ -0.94
LMNA-208ENST00000448611 LRP2P98164 4655 aa9.14□□□□□ -0.95
LMNA-208ENST00000448611 LPAP08519 4548 aa9.14□□□□□ -0.95
LMNA-208ENST00000448611 HMCN2Q8NDA2 5059 aa9.06□□□□□ -0.96
LMNA-208ENST00000448611 SPTSSBQ8NFR3 76 aa9.02□□□□□ -0.97
LMNA-208ENST00000448611 BRK1Q8WUW1 75 aa9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 77.6 ms