RNA–Protein interactions for RNA: ENST00000447734.5

PMS1-216, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 5

Gene PMS1, Length 570 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-216ENST00000447734 DCHS2Q6V1P9 2916 aa0.31□□□□□ -2.36
PMS1-216ENST00000447734 A0A1B0GUL6 1792 aa0.31□□□□□ -2.36
PMS1-216ENST00000447734 PKD1L2Q7Z442 2459 aa0.3□□□□□ -2.36
PMS1-216ENST00000447734 KAAG1Q9UBP8 84 aa0.3□□□□□ -2.36
PMS1-216ENST00000447734 CEP290O15078 2479 aa0.3□□□□□ -2.36
PMS1-216ENST00000447734 NSD1Q96L73 2696 aaPredicted RBP0.29□□□□□ -2.36
PMS1-216ENST00000447734 IGLV5-48A0A075B6I7 105 aa0.29□□□□□ -2.36
PMS1-216ENST00000447734 LYSTQ99698 3801 aa0.29□□□□□ -2.36
PMS1-216ENST00000447734 LMO7Q8WWI1 1683 aa0.29□□□□□ -2.36
PMS1-216ENST00000447734 LINC01546A6NGU7 62 aa0.28□□□□□ -2.36
PMS1-216ENST00000447734 WFDC10BQ8IUB3 73 aa0.28□□□□□ -2.36
PMS1-216ENST00000447734 TFF3Q07654 80 aa0.27□□□□□ -2.37
PMS1-216ENST00000447734 HSPG2P98160 4391 aa0.25□□□□□ -2.37
PMS1-216ENST00000447734 COL7A1Q02388 2944 aa0.25□□□□□ -2.37
PMS1-216ENST00000447734 HMCN2Q8NDA2 5059 aa0.25□□□□□ -2.37
PMS1-216ENST00000447734 DDX60Q8IY21 1712 aaKnown RBP0.24□□□□□ -2.37
PMS1-216ENST00000447734 FLNCQ14315 2725 aa0.24□□□□□ -2.37
PMS1-216ENST00000447734 SPTBN4Q9H254 2564 aa0.24□□□□□ -2.37
PMS1-216ENST00000447734 KIF21BO75037 1637 aa0.24□□□□□ -2.37
PMS1-216ENST00000447734 HECTD4Q9Y4D8 3996 aa0.23□□□□□ -2.37
PMS1-216ENST00000447734 NF1P21359 2839 aa0.23□□□□□ -2.37
PMS1-216ENST00000447734 TOMM5Q8N4H5 51 aa0.23□□□□□ -2.37
PMS1-216ENST00000447734 SMIM2Q9BVW6 85 aa0.23□□□□□ -2.37
PMS1-216ENST00000447734 IQGAP1P46940 1657 aa0.23□□□□□ -2.37
PMS1-216ENST00000447734 FLNAP21333 2647 aaKnown RBP0.23□□□□□ -2.37
PMS1-216ENST00000447734 STAB1Q9NY15 2570 aa0.22□□□□□ -2.37
PMS1-216ENST00000447734 SPRR2AP35326 72 aa0.21□□□□□ -2.38
PMS1-216ENST00000447734 COL6A3P12111 3177 aa0.21□□□□□ -2.38
PMS1-216ENST00000447734 MMP24-AS1A0A0U1RRL7 71 aa0.2□□□□□ -2.38
PMS1-216ENST00000447734 KRTAP6-2Q3LI66 62 aa0.2□□□□□ -2.38
PMS1-216ENST00000447734 FAM208AQ9UK61 1670 aaKnown RBP0.19□□□□□ -2.38
PMS1-216ENST00000447734 SONP18583 2426 aaKnown RBP0.19□□□□□ -2.38
PMS1-216ENST00000447734 PKD1P98161 4303 aa0.18□□□□□ -2.38
PMS1-216ENST00000447734 ANKHD1Q8IWZ3 2542 aaKnown RBP0.18□□□□□ -2.38
PMS1-216ENST00000447734 M0QY20 66 aa0.18□□□□□ -2.38
PMS1-216ENST00000447734 SPRR2GQ9BYE4 73 aa0.18□□□□□ -2.38
PMS1-216ENST00000447734 MUC2Q02817 5179 aa0.18□□□□□ -2.38
PMS1-216ENST00000447734 IQGAP2Q13576 1575 aa0.18□□□□□ -2.38
PMS1-216ENST00000447734 SSPOA2VEC9 5147 aa0.17□□□□□ -2.38
PMS1-216ENST00000447734 ZZEF1O43149 2961 aa0.17□□□□□ -2.38
PMS1-216ENST00000447734 HIVEP1P15822 2718 aa0.17□□□□□ -2.38
PMS1-216ENST00000447734 SPG11Q96JI7 2443 aa0.16□□□□□ -2.38
PMS1-216ENST00000447734 MTORP42345 2549 aa0.16□□□□□ -2.38
PMS1-216ENST00000447734 TENM2Q9NT68 2774 aa0.16□□□□□ -2.38
PMS1-216ENST00000447734 DEFB110Q30KQ9 67 aa0.16□□□□□ -2.38
PMS1-216ENST00000447734 VPS13BQ7Z7G8 4022 aa0.16□□□□□ -2.38
PMS1-216ENST00000447734 GCN1Q92616 2671 aaKnown RBP0.16□□□□□ -2.38
PMS1-216ENST00000447734 SETD2Q9BYW2 2564 aaPredicted RBP0.15□□□□□ -2.38
PMS1-216ENST00000447734 PCLOQ9Y6V0 5065 aa0.15□□□□□ -2.39
PMS1-216ENST00000447734 DEFB131AP59861 70 aa0.15□□□□□ -2.39
PMS1-216ENST00000447734 DMXL1Q9Y485 3027 aa0.15□□□□□ -2.39
PMS1-216ENST00000447734 PDZD2O15018 2839 aa0.14□□□□□ -2.39
PMS1-216ENST00000447734 SRRM2Q9UQ35 2752 aaKnown RBP0.14□□□□□ -2.39
PMS1-216ENST00000447734 NFAT5O94916 1531 aa0.14□□□□□ -2.39
PMS1-216ENST00000447734 A8MTW9 85 aa0.14□□□□□ -2.39
PMS1-216ENST00000447734 ZANQ9Y493 2812 aa0.14□□□□□ -2.39
PMS1-216ENST00000447734 PKHD1P08F94 4074 aa0.13□□□□□ -2.39
PMS1-216ENST00000447734 LRP1BQ9NZR2 4599 aa0.13□□□□□ -2.39
PMS1-216ENST00000447734 TNP1P09430 55 aa0.13□□□□□ -2.39
PMS1-216ENST00000447734 SVEP1Q4LDE5 3571 aa0.12□□□□□ -2.39
PMS1-216ENST00000447734 MT1AP04731 61 aa0.12□□□□□ -2.39
PMS1-216ENST00000447734 SPRR2EP22531 72 aa0.12□□□□□ -2.39
PMS1-216ENST00000447734 LRP2P98164 4655 aa0.12□□□□□ -2.39
PMS1-216ENST00000447734 CUBNO60494 3623 aa0.12□□□□□ -2.39
PMS1-216ENST00000447734 FLGP20930 4061 aaPredicted RBP0.11□□□□□ -2.39
PMS1-216ENST00000447734 LRRK2Q5S007 2527 aa0.1□□□□□ -2.39
PMS1-216ENST00000447734 TRPM2O94759 1503 aa0.1□□□□□ -2.39
PMS1-216ENST00000447734 M0QZ58 72 aa0.1□□□□□ -2.39
PMS1-216ENST00000447734 NDUFA1O15239 70 aa0.1□□□□□ -2.39
PMS1-216ENST00000447734 MAP1AP78559 2803 aaPredicted RBP0.1□□□□□ -2.39
PMS1-216ENST00000447734 ACACAQ13085 2346 aa0.09□□□□□ -2.4
PMS1-216ENST00000447734 ANKRD11Q6UB99 2663 aaPredicted RBP0.09□□□□□ -2.4
PMS1-216ENST00000447734 TACC2O95359 2948 aa0.07□□□□□ -2.4
PMS1-216ENST00000447734 CLTCL1P53675 1640 aa0.07□□□□□ -2.4
PMS1-216ENST00000447734 FAM186AA6NE01 2351 aa0.07□□□□□ -2.4
PMS1-216ENST00000447734 RYR2Q92736 4967 aa0.07□□□□□ -2.4
PMS1-216ENST00000447734 MUC12Q9UKN1 5478 aa0.07□□□□□ -2.4
PMS1-216ENST00000447734 FASNP49327 2511 aaKnown RBP0.07□□□□□ -2.4
PMS1-216ENST00000447734 PKHD1L1Q86WI1 4243 aa0.06□□□□□ -2.4
PMS1-216ENST00000447734 EPG5Q9HCE0 2579 aa0.06□□□□□ -2.4
PMS1-216ENST00000447734 A0A0C4DFX4 3053 aa0.06□□□□□ -2.4
PMS1-216ENST00000447734 NBEAL1Q6ZS30 2694 aa0.06□□□□□ -2.4
PMS1-216ENST00000447734 SACSQ9NZJ4 4579 aa0.06□□□□□ -2.4
PMS1-216ENST00000447734 DNAH3Q8TD57 4116 aa0.06□□□□□ -2.4
PMS1-216ENST00000447734 UTP20O75691 2785 aaKnown RBP0.05□□□□□ -2.4
PMS1-216ENST00000447734 DOPEY1Q5JWR5 2465 aa0.05□□□□□ -2.4
PMS1-216ENST00000447734 STAB2Q8WWQ8 2551 aa0.04□□□□□ -2.4
PMS1-216ENST00000447734 KMT2CQ8NEZ4 4911 aaKnown RBP0.04□□□□□ -2.4
PMS1-216ENST00000447734 DNAH9Q9NYC9 4486 aa0.04□□□□□ -2.4
PMS1-216ENST00000447734 TGP01266 2768 aa0.04□□□□□ -2.4
PMS1-216ENST00000447734 RYR1P21817 5038 aa0.04□□□□□ -2.4
PMS1-216ENST00000447734 SPRR2FQ96RM1 72 aa0.04□□□□□ -2.4
PMS1-216ENST00000447734 UBR4Q5T4S7 5183 aa0.04□□□□□ -2.4
PMS1-216ENST00000447734 ANK3Q12955 4377 aaKnown RBP0.04□□□□□ -2.4
PMS1-216ENST00000447734 AKAP9Q99996 3911 aa0.03□□□□□ -2.4
PMS1-216ENST00000447734 RIF1Q5UIP0 2472 aaKnown RBP0.03□□□□□ -2.41
PMS1-216ENST00000447734 NBEAL2Q6ZNJ1 2754 aa0.02□□□□□ -2.41
PMS1-216ENST00000447734 NBEAQ8NFP9 2946 aa0.02□□□□□ -2.41
PMS1-216ENST00000447734 KALRNO60229 2985 aa0.02□□□□□ -2.41
PMS1-216ENST00000447734 HTTP42858 3142 aa0.02□□□□□ -2.41
Retrieved 100 of 20,778 RNA–protein pairs in 67.6 ms