RNA–Protein interactions for RNA: ENST00000445220.5

SHANK3-203, Transcript of SH3 and multiple ankyrin repeat domains 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SHANK3, Length 5,175 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK3-203ENST00000445220 CRYBG3Q68DQ2 2970 aa10.64□□□□□ -0.71
SHANK3-203ENST00000445220 EYSQ5T1H1 3165 aa10.64□□□□□ -0.71
SHANK3-203ENST00000445220 UTP20O75691 2785 aaKnown RBP10.6□□□□□ -0.71
SHANK3-203ENST00000445220 NBEAQ8NFP9 2946 aa10.59□□□□□ -0.71
SHANK3-203ENST00000445220 KRTAP11-1Q8IUC1 163 aa10.58□□□□□ -0.72
SHANK3-203ENST00000445220 KRTAP7-1Q8IUC3 87 aa10.58□□□□□ -0.72
SHANK3-203ENST00000445220 ASH1LQ9NR48 2969 aaKnown RBP10.58□□□□□ -0.72
SHANK3-203ENST00000445220 SPTBN5Q9NRC6 3674 aaKnown RBP10.58□□□□□ -0.72
SHANK3-203ENST00000445220 Q6ZRN7 208 aaPredicted RBP10.58□□□□□ -0.72
SHANK3-203ENST00000445220 PLAC4Q8WY50 150 aa10.57□□□□□ -0.72
SHANK3-203ENST00000445220 KALRNO60229 2985 aa10.56□□□□□ -0.72
SHANK3-203ENST00000445220 A8MUU9 505 aa10.55□□□□□ -0.72
SHANK3-203ENST00000445220 BOD1L1Q8NFC6 3051 aa10.53□□□□□ -0.72
SHANK3-203ENST00000445220 RPS29P62273 56 aaKnown RBP10.53□□□□□ -0.72
SHANK3-203ENST00000445220 DMXL1Q9Y485 3027 aa10.5□□□□□ -0.73
SHANK3-203ENST00000445220 SPEGQ15772 3267 aa10.5□□□□□ -0.73
SHANK3-203ENST00000445220 ADGRG4Q8IZF6 3080 aa10.49□□□□□ -0.73
SHANK3-203ENST00000445220 KRTAP13-1Q8IUC0 172 aa10.45□□□□□ -0.74
SHANK3-203ENST00000445220 C20orf166-AS1Q96NR2 134 aa10.41□□□□□ -0.74
SHANK3-203ENST00000445220 NIPBLQ6KC79 2804 aaeCLIP10.4□□□□□ -0.74
SHANK3-203ENST00000445220 LRBAP50851 2863 aa10.37□□□□□ -0.75
SHANK3-203ENST00000445220 ZZEF1O43149 2961 aa10.37□□□□□ -0.75
SHANK3-203ENST00000445220 KRTAP13-2Q52LG2 175 aa10.32□□□□□ -0.76
SHANK3-203ENST00000445220 CFAP47Q6ZTR5 3102 aa10.27□□□□□ -0.77
SHANK3-203ENST00000445220 MYO15AQ9UKN7 3530 aa10.24□□□□□ -0.77
SHANK3-203ENST00000445220 USP34Q70CQ2 3546 aa10.21□□□□□ -0.78
SHANK3-203ENST00000445220 C10orf95Q9H7T3 257 aa10.17□□□□□ -0.78
SHANK3-203ENST00000445220 TNP1P09430 55 aa10.14□□□□□ -0.79
SHANK3-203ENST00000445220 LOC400499M0QZD8 3231 aa10.14□□□□□ -0.79
SHANK3-203ENST00000445220 H0YAA0 97 aa10.13□□□□□ -0.79
SHANK3-203ENST00000445220 CELSR2Q9HCU4 2923 aa10.1□□□□□ -0.79
SHANK3-203ENST00000445220 PP632Q6XCG6 107 aa10.1□□□□□ -0.79
SHANK3-203ENST00000445220 ZANQ9Y493 2812 aa10.08□□□□□ -0.8
SHANK3-203ENST00000445220 NF1P21359 2839 aa10.07□□□□□ -0.8
SHANK3-203ENST00000445220 P0C880 135 aa10.06□□□□□ -0.8
SHANK3-203ENST00000445220 HRNRQ86YZ3 2850 aaPredicted RBP10.06□□□□□ -0.8
SHANK3-203ENST00000445220 MXRA5Q9NR99 2828 aa10.03□□□□□ -0.8
SHANK3-203ENST00000445220 DCHS2Q6V1P9 2916 aa10.01□□□□□ -0.81
SHANK3-203ENST00000445220 TENM2Q9NT68 2774 aa9.97□□□□□ -0.81
SHANK3-203ENST00000445220 TENM3Q9P273 2699 aa9.94□□□□□ -0.82
SHANK3-203ENST00000445220 TENM1Q9UKZ4 2725 aa9.9□□□□□ -0.82
SHANK3-203ENST00000445220 KRTAP1-4P0C5Y4 121 aa9.87□□□□□ -0.83
SHANK3-203ENST00000445220 PKD1L1Q8TDX9 2849 aa9.84□□□□□ -0.83
SHANK3-203ENST00000445220 KRTAP10-8P60410 259 aa9.78□□□□□ -0.84
SHANK3-203ENST00000445220 DCHS1Q96JQ0 3298 aa9.78□□□□□ -0.84
SHANK3-203ENST00000445220 WDFY3Q8IZQ1 3526 aa9.76□□□□□ -0.85
SHANK3-203ENST00000445220 FBN2P35556 2912 aa9.71□□□□□ -0.85
SHANK3-203ENST00000445220 PDZD2O15018 2839 aa9.71□□□□□ -0.85
SHANK3-203ENST00000445220 OTOGQ6ZRI0 2925 aa9.69□□□□□ -0.86
SHANK3-203ENST00000445220 XP32Q5T750 250 aa9.69□□□□□ -0.86
SHANK3-203ENST00000445220 RELNP78509 3460 aa9.67□□□□□ -0.86
SHANK3-203ENST00000445220 KRTAP13-3Q3SY46 172 aa9.65□□□□□ -0.86
SHANK3-203ENST00000445220 ASPMQ8IZT6 3477 aa9.63□□□□□ -0.87
SHANK3-203ENST00000445220 MUC3AQ02505 3323 aa9.58□□□□□ -0.88
SHANK3-203ENST00000445220 TPRXLQ17RH7 258 aa9.57□□□□□ -0.88
SHANK3-203ENST00000445220 LAMA5O15230 3695 aa9.57□□□□□ -0.88
SHANK3-203ENST00000445220 ZFHX3Q15911 3703 aa9.57□□□□□ -0.88
SHANK3-203ENST00000445220 DMDP11532 3685 aa9.56□□□□□ -0.88
SHANK3-203ENST00000445220 TGP01266 2768 aa9.53□□□□□ -0.88
SHANK3-203ENST00000445220 FBN3Q75N90 2809 aa9.52□□□□□ -0.89
SHANK3-203ENST00000445220 ZFHX4Q86UP3 3567 aa9.49□□□□□ -0.89
SHANK3-203ENST00000445220 A0A1B0GVY2 172 aa9.48□□□□□ -0.89
SHANK3-203ENST00000445220 NBPF19A0A087WUL8 3843 aa9.46□□□□□ -0.89
SHANK3-203ENST00000445220 VWFP04275 2813 aa9.46□□□□□ -0.9
SHANK3-203ENST00000445220 KRTAP12-2P59991 146 aa9.38□□□□□ -0.91
SHANK3-203ENST00000445220 CELSR1Q9NYQ6 3014 aa9.37□□□□□ -0.91
SHANK3-203ENST00000445220 FBN1P35555 2871 aaKnown RBP9.33□□□□□ -0.92
SHANK3-203ENST00000445220 SMG1Q96Q15 3661 aaKnown RBP9.25□□□□□ -0.93
SHANK3-203ENST00000445220 KRTAP12-1P59990 96 aa9.24□□□□□ -0.93
SHANK3-203ENST00000445220 KRTAP13-4Q3LI77 160 aa9.23□□□□□ -0.93
SHANK3-203ENST00000445220 SRRM2Q9UQ35 2752 aaKnown RBP9.19□□□□□ -0.94
SHANK3-203ENST00000445220 CSMD1Q96PZ7 3565 aa9.17□□□□□ -0.94
SHANK3-203ENST00000445220 CUBNO60494 3623 aa9.14□□□□□ -0.95
SHANK3-203ENST00000445220 PRO2289Q9P1D8 64 aa9.13□□□□□ -0.95
SHANK3-203ENST00000445220 KRTAP10-10P60014 251 aa9.12□□□□□ -0.95
SHANK3-203ENST00000445220 KRTAP3-1Q9BYR8 98 aa9.09□□□□□ -0.95
SHANK3-203ENST00000445220 SVEP1Q4LDE5 3571 aa8.98□□□□□ -0.97
SHANK3-203ENST00000445220 KRTAP15-1Q3LI76 137 aa8.97□□□□□ -0.97
SHANK3-203ENST00000445220 SPENQ96T58 3664 aaKnown RBP8.96□□□□□ -0.97
SHANK3-203ENST00000445220 ANK3Q12955 4377 aaKnown RBP8.94□□□□□ -0.98
SHANK3-203ENST00000445220 KRTAP10-6P60371 365 aaPredicted RBP8.94□□□□□ -0.98
SHANK3-203ENST00000445220 BSNQ9UPA5 3926 aa8.93□□□□□ -0.98
SHANK3-203ENST00000445220 INE1O15225 51 aa8.82□□□□□ -1
SHANK3-203ENST00000445220 CSMD2Q7Z408 3487 aa8.8□□□□□ -1
SHANK3-203ENST00000445220 KRTAP4-5Q9BYR2 181 aa8.76□□□□□ -1.01
SHANK3-203ENST00000445220 COL7A1Q02388 2944 aa8.73□□□□□ -1.01
SHANK3-203ENST00000445220 TRRAPQ9Y4A5 3859 aa8.62□□□□□ -1.03
SHANK3-203ENST00000445220 KRTAP3-2Q9BYR7 98 aa8.59□□□□□ -1.03
SHANK3-203ENST00000445220 MT1HL1P0DM35 61 aa8.5□□□□□ -1.05
SHANK3-203ENST00000445220 DNHD1Q96M86 4753 aa8.5□□□□□ -1.05
SHANK3-203ENST00000445220 KRTAP3-3Q9BYR6 98 aa8.48□□□□□ -1.05
SHANK3-203ENST00000445220 MEGF8Q7Z7M0 2845 aa8.47□□□□□ -1.05
SHANK3-203ENST00000445220 VPS13CQ709C8 3753 aa8.36□□□□□ -1.07
SHANK3-203ENST00000445220 KRTAP10-4P60372 401 aaPredicted RBP8.35□□□□□ -1.07
SHANK3-203ENST00000445220 HUWE1Q7Z6Z7 4374 aaKnown RBP8.31□□□□□ -1.08
SHANK3-203ENST00000445220 KRTAP23-1A1A580 65 aa8.26□□□□□ -1.09
SHANK3-203ENST00000445220 ZNF469Q96JG9 3925 aaPredicted RBP8.21□□□□□ -1.09
SHANK3-203ENST00000445220 KRTAP10-12P60413 245 aa8.18□□□□□ -1.1
SHANK3-203ENST00000445220 ALMS1Q8TCU4 4167 aa8.14□□□□□ -1.11
SHANK3-203ENST00000445220 AKAP9Q99996 3911 aa8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 139.8 ms