RNA–Protein interactions for RNA: ENST00000444772.3

SKIDA1-201, Transcript of SKI/DACH domain containing 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SKIDA1, Length 2,667 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKIDA1-201ENST00000444772 C1orf134Q5TEV5 83 aa12.82□□□□□ -0.36
SKIDA1-201ENST00000444772 A0A087X002 238 aa12.81□□□□□ -0.36
SKIDA1-201ENST00000444772 CHKB-CPT1BH3BT56 60 aa12.81□□□□□ -0.36
SKIDA1-201ENST00000444772 NOTCH2NLQ7Z3S9 236 aa12.81□□□□□ -0.36
SKIDA1-201ENST00000444772 STARD9Q9P2P6 4700 aa12.81□□□□□ -0.36
SKIDA1-201ENST00000444772 Q75L30 129 aa12.8□□□□□ -0.36
SKIDA1-201ENST00000444772 SSBP3-AS1Q7Z2R9 100 aa12.79□□□□□ -0.36
SKIDA1-201ENST00000444772 C8orf87E5RJ46 101 aa12.75□□□□□ -0.37
SKIDA1-201ENST00000444772 DNAH17Q9UFH2 4485 aa12.75□□□□□ -0.37
SKIDA1-201ENST00000444772 SPINK6Q6UWN8 80 aa12.75□□□□□ -0.37
SKIDA1-201ENST00000444772 CIRBP-AS1Q8TBR5 109 aa12.75□□□□□ -0.37
SKIDA1-201ENST00000444772 DNAH8Q96JB1 4490 aa12.74□□□□□ -0.37
SKIDA1-201ENST00000444772 FBN3Q75N90 2809 aa12.74□□□□□ -0.37
SKIDA1-201ENST00000444772 LINC01558Q9Y6Z2 57 aa12.74□□□□□ -0.37
SKIDA1-201ENST00000444772 KRTAP13-3Q3SY46 172 aa12.72□□□□□ -0.37
SKIDA1-201ENST00000444772 HRES1P13985 223 aa12.71□□□□□ -0.37
SKIDA1-201ENST00000444772 FRAS1Q86XX4 4008 aa12.68□□□□□ -0.38
SKIDA1-201ENST00000444772 PMAIP1Q13794 54 aa12.67□□□□□ -0.38
SKIDA1-201ENST00000444772 Q5W150 140 aa12.67□□□□□ -0.38
SKIDA1-201ENST00000444772 TGP01266 2768 aa12.67□□□□□ -0.38
SKIDA1-201ENST00000444772 SPAG11AQ6PDA7 123 aa12.65□□□□□ -0.38
SKIDA1-201ENST00000444772 A6NED7 52 aa12.65□□□□□ -0.39
SKIDA1-201ENST00000444772 DNAH2Q9P225 4427 aa12.64□□□□□ -0.39
SKIDA1-201ENST00000444772 KMT2AQ03164 3969 aa12.64□□□□□ -0.39
SKIDA1-201ENST00000444772 A8MU10 97 aa12.61□□□□□ -0.39
SKIDA1-201ENST00000444772 ATP11AUNQ6ZP68 121 aa12.59□□□□□ -0.39
SKIDA1-201ENST00000444772 LY6G6CO95867 125 aa12.59□□□□□ -0.39
SKIDA1-201ENST00000444772 LINC00313P59037 77 aa12.59□□□□□ -0.39
SKIDA1-201ENST00000444772 LCA10Q71F78 164 aa12.58□□□□□ -0.4
SKIDA1-201ENST00000444772 FAM229AH3BQW9 127 aa12.57□□□□□ -0.4
SKIDA1-201ENST00000444772 ACYP2P14621 99 aa12.57□□□□□ -0.4
SKIDA1-201ENST00000444772 CDC42SE1Q9NRR8 79 aa12.57□□□□□ -0.4
SKIDA1-201ENST00000444772 KRTAP10-2P60368 255 aa12.52□□□□□ -0.41
SKIDA1-201ENST00000444772 KRTAP13-2Q52LG2 175 aa12.5□□□□□ -0.41
SKIDA1-201ENST00000444772 Q6ZSA8 131 aa12.49□□□□□ -0.41
SKIDA1-201ENST00000444772 DMAC1Q96GE9 116 aa12.49□□□□□ -0.41
SKIDA1-201ENST00000444772 SPTSSBQ8NFR3 76 aa12.48□□□□□ -0.41
SKIDA1-201ENST00000444772 ALMS1Q8TCU4 4167 aa12.47□□□□□ -0.41
SKIDA1-201ENST00000444772 SEC61GP60059 68 aa12.46□□□□□ -0.41
SKIDA1-201ENST00000444772 PRR26Q8N8Z3 221 aa12.46□□□□□ -0.41
SKIDA1-201ENST00000444772 DNAH6Q9C0G6 4158 aa12.45□□□□□ -0.42
SKIDA1-201ENST00000444772 IGKV2-30P06310 120 aa12.44□□□□□ -0.42
SKIDA1-201ENST00000444772 DNAH11Q96DT5 4516 aa12.4□□□□□ -0.42
SKIDA1-201ENST00000444772 KRTAP16-1A8MUX0 517 aa12.4□□□□□ -0.42
SKIDA1-201ENST00000444772 SPINK7P58062 85 aa12.39□□□□□ -0.43
SKIDA1-201ENST00000444772 KRTAP10-1P60331 282 aa12.38□□□□□ -0.43
SKIDA1-201ENST00000444772 KTN1-AS1Q86SY8 53 aa12.37□□□□□ -0.43
SKIDA1-201ENST00000444772 A6NN06 94 aa12.36□□□□□ -0.43
SKIDA1-201ENST00000444772 KRTAP1-4P0C5Y4 121 aa12.36□□□□□ -0.43
SKIDA1-201ENST00000444772 DNAH5Q8TE73 4624 aa12.35□□□□□ -0.43
SKIDA1-201ENST00000444772 RETNLBQ9BQ08 111 aa12.33□□□□□ -0.44
SKIDA1-201ENST00000444772 C4orf48Q5BLP8 95 aa12.3□□□□□ -0.44
SKIDA1-201ENST00000444772 SPINK1P00995 79 aa12.26□□□□□ -0.45
SKIDA1-201ENST00000444772 PLA2G1BP04054 148 aaKnown RBP12.24□□□□□ -0.45
SKIDA1-201ENST00000444772 TYMSOSQ8TAI1 123 aa12.23□□□□□ -0.45
SKIDA1-201ENST00000444772 A0A1B0GU69 56 aa12.23□□□□□ -0.45
SKIDA1-201ENST00000444772 HYDINQ4G0P3 5121 aa12.22□□□□□ -0.45
SKIDA1-201ENST00000444772 IGKV2D-30A0A075B6S6 120 aa12.2□□□□□ -0.46
SKIDA1-201ENST00000444772 PKD1P98161 4303 aa12.19□□□□□ -0.46
SKIDA1-201ENST00000444772 LRP1BQ9NZR2 4599 aa12.19□□□□□ -0.46
SKIDA1-201ENST00000444772 C7orf65Q6ZTY9 151 aa12.16□□□□□ -0.46
SKIDA1-201ENST00000444772 RPS29P62273 56 aaKnown RBP12.15□□□□□ -0.46
SKIDA1-201ENST00000444772 FAT2Q9NYQ8 4349 aa12.1□□□□□ -0.47
SKIDA1-201ENST00000444772 SPATA8Q6RVD6 105 aa12.09□□□□□ -0.47
SKIDA1-201ENST00000444772 VPS13BQ7Z7G8 4022 aa12.08□□□□□ -0.48
SKIDA1-201ENST00000444772 SACSQ9NZJ4 4579 aa12.07□□□□□ -0.48
SKIDA1-201ENST00000444772 LINC00304Q8N9R0 145 aa12.07□□□□□ -0.48
SKIDA1-201ENST00000444772 UQCR11O14957 56 aa12.05□□□□□ -0.48
SKIDA1-201ENST00000444772 RBM12B-AS1Q9P1G2 102 aa12.03□□□□□ -0.48
SKIDA1-201ENST00000444772 MIR22HGQ0VDD5 57 aa11.99□□□□□ -0.49
SKIDA1-201ENST00000444772 Q8N1X5 172 aa11.88□□□□□ -0.51
SKIDA1-201ENST00000444772 C20orf166-AS1Q96NR2 134 aa11.87□□□□□ -0.51
SKIDA1-201ENST00000444772 A8MUU9 505 aa11.86□□□□□ -0.51
SKIDA1-201ENST00000444772 KMT2CQ8NEZ4 4911 aaKnown RBP11.85□□□□□ -0.51
SKIDA1-201ENST00000444772 RYR2Q92736 4967 aa11.8□□□□□ -0.52
SKIDA1-201ENST00000444772 PKHD1P08F94 4074 aa11.77□□□□□ -0.53
SKIDA1-201ENST00000444772 SMR3BP02814 79 aaPredicted RBP11.76□□□□□ -0.53
SKIDA1-201ENST00000444772 C9orf92A6NGG3 77 aa11.75□□□□□ -0.53
SKIDA1-201ENST00000444772 KRTAP10-4P60372 401 aaPredicted RBP11.71□□□□□ -0.54
SKIDA1-201ENST00000444772 A0A1B0GVY2 172 aa11.68□□□□□ -0.54
SKIDA1-201ENST00000444772 PRAC1Q96KF2 57 aa11.68□□□□□ -0.54
SKIDA1-201ENST00000444772 DYNC1H1Q14204 4646 aaKnown RBP11.67□□□□□ -0.54
SKIDA1-201ENST00000444772 PKHD1L1Q86WI1 4243 aa11.65□□□□□ -0.55
SKIDA1-201ENST00000444772 KRTAP3-1Q9BYR8 98 aa11.64□□□□□ -0.55
SKIDA1-201ENST00000444772 ADM2Q7Z4H4 148 aa11.63□□□□□ -0.55
SKIDA1-201ENST00000444772 RYR3Q15413 4870 aa11.57□□□□□ -0.56
SKIDA1-201ENST00000444772 APOBP04114 4563 aaKnown RBP11.56□□□□□ -0.56
SKIDA1-201ENST00000444772 A0A1B0GU33 70 aa11.54□□□□□ -0.56
SKIDA1-201ENST00000444772 H0YAA0 97 aa11.54□□□□□ -0.56
SKIDA1-201ENST00000444772 COX6B2Q6YFQ2 88 aa11.52□□□□□ -0.57
SKIDA1-201ENST00000444772 H1FX-AS1Q4G0G2 97 aa11.49□□□□□ -0.57
SKIDA1-201ENST00000444772 LINC01554Q52M75 96 aa11.45□□□□□ -0.58
SKIDA1-201ENST00000444772 FAT1Q14517 4588 aa11.45□□□□□ -0.58
SKIDA1-201ENST00000444772 FLG2Q5D862 2391 aaPredicted RBP11.39□□□□□ -0.59
SKIDA1-201ENST00000444772 CSAG1Q6PB30 78 aa11.39□□□□□ -0.59
SKIDA1-201ENST00000444772 H3BS24 57 aa11.38□□□□□ -0.59
SKIDA1-201ENST00000444772 KRTAP10-8P60410 259 aa11.31□□□□□ -0.6
SKIDA1-201ENST00000444772 K7ERS5 55 aa11.27□□□□□ -0.61
SKIDA1-201ENST00000444772 RPL37P61927 97 aaKnown RBP11.26□□□□□ -0.61
SKIDA1-201ENST00000444772 HSPG2P98160 4391 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms