RNA–Protein interactions for RNA: ENST00000444237.2

SCN11A-202, Transcript of sodium voltage-gated channel alpha subunit 11, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SCN11A, Length 5,729 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN11A-202ENST00000444237 FLNCQ14315 2725 aa2.89□□□□□ -1.95
SCN11A-202ENST00000444237 KALRNO60229 2985 aa2.89□□□□□ -1.95
SCN11A-202ENST00000444237 KRTAP13-1Q8IUC0 172 aa2.89□□□□□ -1.95
SCN11A-202ENST00000444237 R4GN34 69 aa2.89□□□□□ -1.95
SCN11A-202ENST00000444237 ATRQ13535 2644 aa2.88□□□□□ -1.95
SCN11A-202ENST00000444237 CFAP47Q6ZTR5 3102 aa2.88□□□□□ -1.95
SCN11A-202ENST00000444237 C10orf95Q9H7T3 257 aa2.87□□□□□ -1.95
SCN11A-202ENST00000444237 APCP25054 2843 aa2.87□□□□□ -1.95
SCN11A-202ENST00000444237 M0QZ58 72 aa2.87□□□□□ -1.95
SCN11A-202ENST00000444237 ZFHX4Q86UP3 3567 aa2.87□□□□□ -1.95
SCN11A-202ENST00000444237 TEX15Q9BXT5 2789 aa2.87□□□□□ -1.95
SCN11A-202ENST00000444237 BSNQ9UPA5 3926 aa2.86□□□□□ -1.95
SCN11A-202ENST00000444237 KRTAP1-5Q9BYS1 174 aa2.86□□□□□ -1.95
SCN11A-202ENST00000444237 NBPF19A0A087WUL8 3843 aa2.85□□□□□ -1.95
SCN11A-202ENST00000444237 HIVEP1P15822 2718 aa2.85□□□□□ -1.95
SCN11A-202ENST00000444237 TENM4Q6N022 2769 aa2.85□□□□□ -1.95
SCN11A-202ENST00000444237 RELNP78509 3460 aa2.85□□□□□ -1.95
SCN11A-202ENST00000444237 HRNRQ86YZ3 2850 aaPredicted RBP2.84□□□□□ -1.95
SCN11A-202ENST00000444237 ITPR2Q14571 2701 aa2.84□□□□□ -1.95
SCN11A-202ENST00000444237 ADGRG4Q8IZF6 3080 aa2.84□□□□□ -1.95
SCN11A-202ENST00000444237 PP632Q6XCG6 107 aa2.83□□□□□ -1.96
SCN11A-202ENST00000444237 ZZEF1O43149 2961 aa2.83□□□□□ -1.96
SCN11A-202ENST00000444237 ANK3Q12955 4377 aaKnown RBP2.83□□□□□ -1.96
SCN11A-202ENST00000444237 MGAM2Q2M2H8 2515 aa2.82□□□□□ -1.96
SCN11A-202ENST00000444237 DMBT1Q9UGM3 2413 aaPredicted RBP2.82□□□□□ -1.96
SCN11A-202ENST00000444237 KRTAP10-2P60368 255 aa2.82□□□□□ -1.96
SCN11A-202ENST00000444237 RPS29P62273 56 aaKnown RBP2.82□□□□□ -1.96
SCN11A-202ENST00000444237 KRTAP13-3Q3SY46 172 aa2.82□□□□□ -1.96
SCN11A-202ENST00000444237 SETXQ7Z333 2677 aaKnown RBP2.82□□□□□ -1.96
SCN11A-202ENST00000444237 FBN2P35556 2912 aa2.81□□□□□ -1.96
SCN11A-202ENST00000444237 COL6A5A8TX70 2615 aa2.81□□□□□ -1.96
SCN11A-202ENST00000444237 CELSR2Q9HCU4 2923 aa2.81□□□□□ -1.96
SCN11A-202ENST00000444237 KRTAP10-1P60331 282 aa2.8□□□□□ -1.96
SCN11A-202ENST00000444237 SMG1Q96Q15 3661 aaKnown RBP2.8□□□□□ -1.96
SCN11A-202ENST00000444237 CRYBG3Q68DQ2 2970 aa2.8□□□□□ -1.96
SCN11A-202ENST00000444237 M0R2T5 61 aa2.79□□□□□ -1.96
SCN11A-202ENST00000444237 MAP1AP78559 2803 aaPredicted RBP2.79□□□□□ -1.96
SCN11A-202ENST00000444237 PDZD2O15018 2839 aa2.79□□□□□ -1.96
SCN11A-202ENST00000444237 ASH1LQ9NR48 2969 aaKnown RBP2.78□□□□□ -1.96
SCN11A-202ENST00000444237 SPENQ96T58 3664 aaKnown RBP2.77□□□□□ -1.97
SCN11A-202ENST00000444237 TPRXLQ17RH7 258 aa2.76□□□□□ -1.97
SCN11A-202ENST00000444237 NSD1Q96L73 2696 aaPredicted RBP2.76□□□□□ -1.97
SCN11A-202ENST00000444237 KRTAP15-1Q3LI76 137 aa2.76□□□□□ -1.97
SCN11A-202ENST00000444237 TACC2O95359 2948 aa2.76□□□□□ -1.97
SCN11A-202ENST00000444237 STAB1Q9NY15 2570 aa2.76□□□□□ -1.97
SCN11A-202ENST00000444237 KRTAP13-2Q52LG2 175 aa2.75□□□□□ -1.97
SCN11A-202ENST00000444237 AKAP9Q99996 3911 aa2.74□□□□□ -1.97
SCN11A-202ENST00000444237 DCHS2Q6V1P9 2916 aa2.73□□□□□ -1.97
SCN11A-202ENST00000444237 CSMD1Q96PZ7 3565 aa2.73□□□□□ -1.97
SCN11A-202ENST00000444237 NBEAL1Q6ZS30 2694 aa2.72□□□□□ -1.97
SCN11A-202ENST00000444237 Q6ZRN7 208 aaPredicted RBP2.72□□□□□ -1.97
SCN11A-202ENST00000444237 OTOGQ6ZRI0 2925 aa2.72□□□□□ -1.97
SCN11A-202ENST00000444237 LCE2DQ5TA82 110 aaPredicted RBP2.72□□□□□ -1.97
SCN11A-202ENST00000444237 NBEAL2Q6ZNJ1 2754 aa2.72□□□□□ -1.97
SCN11A-202ENST00000444237 TNP1P09430 55 aa2.71□□□□□ -1.98
SCN11A-202ENST00000444237 ZANQ9Y493 2812 aa2.7□□□□□ -1.98
SCN11A-202ENST00000444237 KRTAP10-8P60410 259 aa2.7□□□□□ -1.98
SCN11A-202ENST00000444237 NOTCH1P46531 2555 aa2.69□□□□□ -1.98
SCN11A-202ENST00000444237 STAB2Q8WWQ8 2551 aa2.68□□□□□ -1.98
SCN11A-202ENST00000444237 CSMD2Q7Z408 3487 aa2.68□□□□□ -1.98
SCN11A-202ENST00000444237 NIPBLQ6KC79 2804 aaeCLIP2.67□□□□□ -1.98
SCN11A-202ENST00000444237 KRTAP3-3Q9BYR6 98 aa2.66□□□□□ -1.98
SCN11A-202ENST00000444237 KRTAP3-2Q9BYR7 98 aa2.66□□□□□ -1.98
SCN11A-202ENST00000444237 KRTAP12-2P59991 146 aa2.65□□□□□ -1.99
SCN11A-202ENST00000444237 FBN1P35555 2871 aaKnown RBP2.64□□□□□ -1.99
SCN11A-202ENST00000444237 MXRA5Q9NR99 2828 aa2.63□□□□□ -1.99
SCN11A-202ENST00000444237 INE1O15225 51 aa2.63□□□□□ -1.99
SCN11A-202ENST00000444237 PRO2289Q9P1D8 64 aa2.63□□□□□ -1.99
SCN11A-202ENST00000444237 VPS13CQ709C8 3753 aa2.62□□□□□ -1.99
SCN11A-202ENST00000444237 KRTAP12-1P59990 96 aa2.61□□□□□ -1.99
SCN11A-202ENST00000444237 XP32Q5T750 250 aa2.61□□□□□ -1.99
SCN11A-202ENST00000444237 KRTAP1-4P0C5Y4 121 aa2.6□□□□□ -1.99
SCN11A-202ENST00000444237 NF1P21359 2839 aa2.6□□□□□ -1.99
SCN11A-202ENST00000444237 ALMS1Q8TCU4 4167 aa2.6□□□□□ -1.99
SCN11A-202ENST00000444237 A0A1B0GVY2 172 aa2.6□□□□□ -1.99
SCN11A-202ENST00000444237 SVEP1Q4LDE5 3571 aa2.6□□□□□ -1.99
SCN11A-202ENST00000444237 CELSR1Q9NYQ6 3014 aa2.6□□□□□ -1.99
SCN11A-202ENST00000444237 HUWE1Q7Z6Z7 4374 aaKnown RBP2.59□□□□□ -1.99
SCN11A-202ENST00000444237 ZNF469Q96JG9 3925 aaPredicted RBP2.59□□□□□ -2
SCN11A-202ENST00000444237 KRTAP13-4Q3LI77 160 aa2.58□□□□□ -2
SCN11A-202ENST00000444237 KRTAP3-1Q9BYR8 98 aa2.57□□□□□ -2
SCN11A-202ENST00000444237 KRTAP10-6P60371 365 aaPredicted RBP2.56□□□□□ -2
SCN11A-202ENST00000444237 TRRAPQ9Y4A5 3859 aa2.55□□□□□ -2
SCN11A-202ENST00000444237 TENM1Q9UKZ4 2725 aa2.54□□□□□ -2
SCN11A-202ENST00000444237 CUBNO60494 3623 aa2.54□□□□□ -2
SCN11A-202ENST00000444237 TGP01266 2768 aa2.53□□□□□ -2
SCN11A-202ENST00000444237 TENM2Q9NT68 2774 aa2.53□□□□□ -2
SCN11A-202ENST00000444237 ANK2Q01484 3957 aa2.52□□□□□ -2.01
SCN11A-202ENST00000444237 KRTAP23-1A1A580 65 aa2.52□□□□□ -2.01
SCN11A-202ENST00000444237 FBN3Q75N90 2809 aa2.52□□□□□ -2.01
SCN11A-202ENST00000444237 DNAH9Q9NYC9 4486 aa2.52□□□□□ -2.01
SCN11A-202ENST00000444237 CMYA5Q8N3K9 4069 aa2.51□□□□□ -2.01
SCN11A-202ENST00000444237 VWFP04275 2813 aa2.5□□□□□ -2.01
SCN11A-202ENST00000444237 TENM3Q9P273 2699 aa2.47□□□□□ -2.01
SCN11A-202ENST00000444237 PKD1L1Q8TDX9 2849 aa2.45□□□□□ -2.02
SCN11A-202ENST00000444237 DNAH3Q8TD57 4116 aa2.41□□□□□ -2.02
SCN11A-202ENST00000444237 KRTAP4-5Q9BYR2 181 aa2.41□□□□□ -2.02
SCN11A-202ENST00000444237 DNHD1Q96M86 4753 aa2.39□□□□□ -2.03
SCN11A-202ENST00000444237 PRKDCP78527 4128 aaKnown RBP2.38□□□□□ -2.03
SCN11A-202ENST00000444237 PLECQ15149 4684 aaKnown RBP2.38□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms