RNA–Protein interactions for RNA: ENST00000444237.2

SCN11A-202, Transcript of sodium voltage-gated channel alpha subunit 11, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SCN11A, Length 5,729 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN11A-202ENST00000444237 FLNCQ14315 2725 aa2.89□□□□□ -1.95
SCN11A-202ENST00000444237 KALRNO60229 2985 aa2.89□□□□□ -1.95
SCN11A-202ENST00000444237 KRTAP13-1Q8IUC0 172 aa2.89□□□□□ -1.95
SCN11A-202ENST00000444237 R4GN34 69 aa2.89□□□□□ -1.95
SCN11A-202ENST00000444237 ATRQ13535 2644 aa2.88□□□□□ -1.95
SCN11A-202ENST00000444237 CFAP47Q6ZTR5 3102 aa2.88□□□□□ -1.95
SCN11A-202ENST00000444237 C10orf95Q9H7T3 257 aa2.87□□□□□ -1.95
SCN11A-202ENST00000444237 APCP25054 2843 aa2.87□□□□□ -1.95
SCN11A-202ENST00000444237 M0QZ58 72 aa2.87□□□□□ -1.95
SCN11A-202ENST00000444237 ZFHX4Q86UP3 3567 aa2.87□□□□□ -1.95
SCN11A-202ENST00000444237 TEX15Q9BXT5 2789 aa2.87□□□□□ -1.95
SCN11A-202ENST00000444237 BSNQ9UPA5 3926 aa2.86□□□□□ -1.95
SCN11A-202ENST00000444237 KRTAP1-5Q9BYS1 174 aa2.86□□□□□ -1.95
SCN11A-202ENST00000444237 NBPF19A0A087WUL8 3843 aa2.85□□□□□ -1.95
SCN11A-202ENST00000444237 HIVEP1P15822 2718 aa2.85□□□□□ -1.95
SCN11A-202ENST00000444237 TENM4Q6N022 2769 aa2.85□□□□□ -1.95
SCN11A-202ENST00000444237 RELNP78509 3460 aa2.85□□□□□ -1.95
SCN11A-202ENST00000444237 HRNRQ86YZ3 2850 aaPredicted RBP2.84□□□□□ -1.95
SCN11A-202ENST00000444237 ITPR2Q14571 2701 aa2.84□□□□□ -1.95
SCN11A-202ENST00000444237 ADGRG4Q8IZF6 3080 aa2.84□□□□□ -1.95
SCN11A-202ENST00000444237 PP632Q6XCG6 107 aa2.83□□□□□ -1.96
SCN11A-202ENST00000444237 ZZEF1O43149 2961 aa2.83□□□□□ -1.96
SCN11A-202ENST00000444237 ANK3Q12955 4377 aaKnown RBP2.83□□□□□ -1.96
SCN11A-202ENST00000444237 MGAM2Q2M2H8 2515 aa2.82□□□□□ -1.96
SCN11A-202ENST00000444237 DMBT1Q9UGM3 2413 aaPredicted RBP2.82□□□□□ -1.96
SCN11A-202ENST00000444237 KRTAP10-2P60368 255 aa2.82□□□□□ -1.96
SCN11A-202ENST00000444237 RPS29P62273 56 aaKnown RBP2.82□□□□□ -1.96
SCN11A-202ENST00000444237 KRTAP13-3Q3SY46 172 aa2.82□□□□□ -1.96
SCN11A-202ENST00000444237 SETXQ7Z333 2677 aaKnown RBP2.82□□□□□ -1.96
SCN11A-202ENST00000444237 FBN2P35556 2912 aa2.81□□□□□ -1.96
SCN11A-202ENST00000444237 COL6A5A8TX70 2615 aa2.81□□□□□ -1.96
SCN11A-202ENST00000444237 CELSR2Q9HCU4 2923 aa2.81□□□□□ -1.96
SCN11A-202ENST00000444237 KRTAP10-1P60331 282 aa2.8□□□□□ -1.96
SCN11A-202ENST00000444237 SMG1Q96Q15 3661 aaKnown RBP2.8□□□□□ -1.96
SCN11A-202ENST00000444237 CRYBG3Q68DQ2 2970 aa2.8□□□□□ -1.96
SCN11A-202ENST00000444237 M0R2T5 61 aa2.79□□□□□ -1.96
SCN11A-202ENST00000444237 MAP1AP78559 2803 aaPredicted RBP2.79□□□□□ -1.96
SCN11A-202ENST00000444237 PDZD2O15018 2839 aa2.79□□□□□ -1.96
SCN11A-202ENST00000444237 ASH1LQ9NR48 2969 aaKnown RBP2.78□□□□□ -1.96
SCN11A-202ENST00000444237 SPENQ96T58 3664 aaKnown RBP2.77□□□□□ -1.97
SCN11A-202ENST00000444237 TPRXLQ17RH7 258 aa2.76□□□□□ -1.97
SCN11A-202ENST00000444237 NSD1Q96L73 2696 aaPredicted RBP2.76□□□□□ -1.97
SCN11A-202ENST00000444237 KRTAP15-1Q3LI76 137 aa2.76□□□□□ -1.97
SCN11A-202ENST00000444237 TACC2O95359 2948 aa2.76□□□□□ -1.97
SCN11A-202ENST00000444237 STAB1Q9NY15 2570 aa2.76□□□□□ -1.97
SCN11A-202ENST00000444237 KRTAP13-2Q52LG2 175 aa2.75□□□□□ -1.97
SCN11A-202ENST00000444237 AKAP9Q99996 3911 aa2.74□□□□□ -1.97
SCN11A-202ENST00000444237 DCHS2Q6V1P9 2916 aa2.73□□□□□ -1.97
SCN11A-202ENST00000444237 CSMD1Q96PZ7 3565 aa2.73□□□□□ -1.97
SCN11A-202ENST00000444237 NBEAL1Q6ZS30 2694 aa2.72□□□□□ -1.97
SCN11A-202ENST00000444237 Q6ZRN7 208 aaPredicted RBP2.72□□□□□ -1.97
SCN11A-202ENST00000444237 OTOGQ6ZRI0 2925 aa2.72□□□□□ -1.97
SCN11A-202ENST00000444237 LCE2DQ5TA82 110 aaPredicted RBP2.72□□□□□ -1.97
SCN11A-202ENST00000444237 NBEAL2Q6ZNJ1 2754 aa2.72□□□□□ -1.97
SCN11A-202ENST00000444237 TNP1P09430 55 aa2.71□□□□□ -1.98
SCN11A-202ENST00000444237 ZANQ9Y493 2812 aa2.7□□□□□ -1.98
SCN11A-202ENST00000444237 KRTAP10-8P60410 259 aa2.7□□□□□ -1.98
SCN11A-202ENST00000444237 NOTCH1P46531 2555 aa2.69□□□□□ -1.98
SCN11A-202ENST00000444237 STAB2Q8WWQ8 2551 aa2.68□□□□□ -1.98
SCN11A-202ENST00000444237 CSMD2Q7Z408 3487 aa2.68□□□□□ -1.98
SCN11A-202ENST00000444237 NIPBLQ6KC79 2804 aaeCLIP2.67□□□□□ -1.98
SCN11A-202ENST00000444237 KRTAP3-3Q9BYR6 98 aa2.66□□□□□ -1.98
SCN11A-202ENST00000444237 KRTAP3-2Q9BYR7 98 aa2.66□□□□□ -1.98
SCN11A-202ENST00000444237 KRTAP12-2P59991 146 aa2.65□□□□□ -1.99
SCN11A-202ENST00000444237 FBN1P35555 2871 aaKnown RBP2.64□□□□□ -1.99
SCN11A-202ENST00000444237 MXRA5Q9NR99 2828 aa2.63□□□□□ -1.99
SCN11A-202ENST00000444237 INE1O15225 51 aa2.63□□□□□ -1.99
SCN11A-202ENST00000444237 PRO2289Q9P1D8 64 aa2.63□□□□□ -1.99
SCN11A-202ENST00000444237 VPS13CQ709C8 3753 aa2.62□□□□□ -1.99
SCN11A-202ENST00000444237 KRTAP12-1P59990 96 aa2.61□□□□□ -1.99
SCN11A-202ENST00000444237 XP32Q5T750 250 aa2.61□□□□□ -1.99
SCN11A-202ENST00000444237 KRTAP1-4P0C5Y4 121 aa2.6□□□□□ -1.99
SCN11A-202ENST00000444237 NF1P21359 2839 aa2.6□□□□□ -1.99
SCN11A-202ENST00000444237 ALMS1Q8TCU4 4167 aa2.6□□□□□ -1.99
SCN11A-202ENST00000444237 A0A1B0GVY2 172 aa2.6□□□□□ -1.99
SCN11A-202ENST00000444237 SVEP1Q4LDE5 3571 aa2.6□□□□□ -1.99
SCN11A-202ENST00000444237 CELSR1Q9NYQ6 3014 aa2.6□□□□□ -1.99
SCN11A-202ENST00000444237 HUWE1Q7Z6Z7 4374 aaKnown RBP2.59□□□□□ -1.99
SCN11A-202ENST00000444237 ZNF469Q96JG9 3925 aaPredicted RBP2.59□□□□□ -2
SCN11A-202ENST00000444237 KRTAP13-4Q3LI77 160 aa2.58□□□□□ -2
SCN11A-202ENST00000444237 KRTAP3-1Q9BYR8 98 aa2.57□□□□□ -2
SCN11A-202ENST00000444237 KRTAP10-6P60371 365 aaPredicted RBP2.56□□□□□ -2
SCN11A-202ENST00000444237 TRRAPQ9Y4A5 3859 aa2.55□□□□□ -2
SCN11A-202ENST00000444237 TENM1Q9UKZ4 2725 aa2.54□□□□□ -2
SCN11A-202ENST00000444237 CUBNO60494 3623 aa2.54□□□□□ -2
SCN11A-202ENST00000444237 TGP01266 2768 aa2.53□□□□□ -2
SCN11A-202ENST00000444237 TENM2Q9NT68 2774 aa2.53□□□□□ -2
SCN11A-202ENST00000444237 ANK2Q01484 3957 aa2.52□□□□□ -2.01
SCN11A-202ENST00000444237 KRTAP23-1A1A580 65 aa2.52□□□□□ -2.01
SCN11A-202ENST00000444237 FBN3Q75N90 2809 aa2.52□□□□□ -2.01
SCN11A-202ENST00000444237 DNAH9Q9NYC9 4486 aa2.52□□□□□ -2.01
SCN11A-202ENST00000444237 CMYA5Q8N3K9 4069 aa2.51□□□□□ -2.01
SCN11A-202ENST00000444237 VWFP04275 2813 aa2.5□□□□□ -2.01
SCN11A-202ENST00000444237 TENM3Q9P273 2699 aa2.47□□□□□ -2.01
SCN11A-202ENST00000444237 PKD1L1Q8TDX9 2849 aa2.45□□□□□ -2.02
SCN11A-202ENST00000444237 DNAH3Q8TD57 4116 aa2.41□□□□□ -2.02
SCN11A-202ENST00000444237 KRTAP4-5Q9BYR2 181 aa2.41□□□□□ -2.02
SCN11A-202ENST00000444237 DNHD1Q96M86 4753 aa2.39□□□□□ -2.03
SCN11A-202ENST00000444237 PRKDCP78527 4128 aaKnown RBP2.38□□□□□ -2.03
SCN11A-202ENST00000444237 PLECQ15149 4684 aaKnown RBP2.38□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms