RNA–Protein interactions for RNA: ENST00000439977.6

HERPUD1-204, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HERPUD1, Length 2,946 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-204ENST00000439977 CD164Q04900 197 aa8.04□□□□□ -1.12
HERPUD1-204ENST00000439977 C1orf134Q5TEV5 83 aa8.02□□□□□ -1.12
HERPUD1-204ENST00000439977 ASB16-AS1Q495Z4 193 aa8.02□□□□□ -1.13
HERPUD1-204ENST00000439977 COA5Q86WW8 74 aa8.01□□□□□ -1.13
HERPUD1-204ENST00000439977 MRPL34Q9BQ48 92 aaKnown RBP8□□□□□ -1.13
HERPUD1-204ENST00000439977 IGLV7-43P04211 117 aa7.99□□□□□ -1.13
HERPUD1-204ENST00000439977 Q8N9P0 234 aaPredicted RBP7.99□□□□□ -1.13
HERPUD1-204ENST00000439977 TP53AIP1Q9HCN2 124 aa7.99□□□□□ -1.13
HERPUD1-204ENST00000439977 DNAH11Q96DT5 4516 aa7.99□□□□□ -1.13
HERPUD1-204ENST00000439977 IGLV7-46A0A075B6I9 117 aa7.99□□□□□ -1.13
HERPUD1-204ENST00000439977 PRR15LQ9BU68 103 aa7.98□□□□□ -1.13
HERPUD1-204ENST00000439977 KRTAP10-2P60368 255 aa7.97□□□□□ -1.13
HERPUD1-204ENST00000439977 Q5VV11 94 aa7.97□□□□□ -1.13
HERPUD1-204ENST00000439977 ALMS1Q8TCU4 4167 aa7.97□□□□□ -1.13
HERPUD1-204ENST00000439977 Q5W150 140 aa7.96□□□□□ -1.14
HERPUD1-204ENST00000439977 CHKB-CPT1BH3BT56 60 aa7.96□□□□□ -1.14
HERPUD1-204ENST00000439977 C1orf195Q5TG92 126 aa7.95□□□□□ -1.14
HERPUD1-204ENST00000439977 SPAG11AQ6PDA7 123 aa7.94□□□□□ -1.14
HERPUD1-204ENST00000439977 RETNLBQ9BQ08 111 aa7.94□□□□□ -1.14
HERPUD1-204ENST00000439977 V9GYY9 64 aa7.93□□□□□ -1.14
HERPUD1-204ENST00000439977 LRP1BQ9NZR2 4599 aa7.93□□□□□ -1.14
HERPUD1-204ENST00000439977 DNAH5Q8TE73 4624 aa7.93□□□□□ -1.14
HERPUD1-204ENST00000439977 LIMD2Q9BT23 127 aa7.9□□□□□ -1.15
HERPUD1-204ENST00000439977 HYDINQ4G0P3 5121 aa7.9□□□□□ -1.15
HERPUD1-204ENST00000439977 HRES1P13985 223 aa7.89□□□□□ -1.15
HERPUD1-204ENST00000439977 A6NED7 52 aa7.85□□□□□ -1.15
HERPUD1-204ENST00000439977 PRR26Q8N8Z3 221 aa7.84□□□□□ -1.15
HERPUD1-204ENST00000439977 KRTAP10-1P60331 282 aa7.84□□□□□ -1.15
HERPUD1-204ENST00000439977 KRTAP13-2Q52LG2 175 aa7.84□□□□□ -1.15
HERPUD1-204ENST00000439977 SPTSSBQ8NFR3 76 aa7.84□□□□□ -1.15
HERPUD1-204ENST00000439977 SSBP3-AS1Q7Z2R9 100 aa7.83□□□□□ -1.16
HERPUD1-204ENST00000439977 LINC00313P59037 77 aa7.82□□□□□ -1.16
HERPUD1-204ENST00000439977 LOC101927531A0A1B0GV80 90 aa7.81□□□□□ -1.16
HERPUD1-204ENST00000439977 KRTAP13-3Q3SY46 172 aa7.81□□□□□ -1.16
HERPUD1-204ENST00000439977 LCA10Q71F78 164 aa7.81□□□□□ -1.16
HERPUD1-204ENST00000439977 VPS13BQ7Z7G8 4022 aa7.8□□□□□ -1.16
HERPUD1-204ENST00000439977 PMAIP1Q13794 54 aa7.8□□□□□ -1.16
HERPUD1-204ENST00000439977 Q75L30 129 aa7.78□□□□□ -1.16
HERPUD1-204ENST00000439977 PKD1P98161 4303 aa7.77□□□□□ -1.17
HERPUD1-204ENST00000439977 FAT2Q9NYQ8 4349 aa7.77□□□□□ -1.17
HERPUD1-204ENST00000439977 LINC01558Q9Y6Z2 57 aa7.75□□□□□ -1.17
HERPUD1-204ENST00000439977 SPINK7P58062 85 aa7.75□□□□□ -1.17
HERPUD1-204ENST00000439977 C8orf87E5RJ46 101 aa7.74□□□□□ -1.17
HERPUD1-204ENST00000439977 SEC61GP60059 68 aa7.74□□□□□ -1.17
HERPUD1-204ENST00000439977 PKHD1P08F94 4074 aa7.73□□□□□ -1.17
HERPUD1-204ENST00000439977 KRTAP1-4P0C5Y4 121 aa7.72□□□□□ -1.17
HERPUD1-204ENST00000439977 Q6ZSA8 131 aa7.71□□□□□ -1.18
HERPUD1-204ENST00000439977 PLA2G1BP04054 148 aaKnown RBP7.71□□□□□ -1.18
HERPUD1-204ENST00000439977 IGKV2D-30A0A075B6S6 120 aa7.7□□□□□ -1.18
HERPUD1-204ENST00000439977 IGKV2-30P06310 120 aa7.7□□□□□ -1.18
HERPUD1-204ENST00000439977 FAM229AH3BQW9 127 aa7.7□□□□□ -1.18
HERPUD1-204ENST00000439977 ACYP2P14621 99 aa7.7□□□□□ -1.18
HERPUD1-204ENST00000439977 KRTAP16-1A8MUX0 517 aa7.66□□□□□ -1.18
HERPUD1-204ENST00000439977 C4orf48Q5BLP8 95 aa7.66□□□□□ -1.18
HERPUD1-204ENST00000439977 TYMSOSQ8TAI1 123 aa7.66□□□□□ -1.18
HERPUD1-204ENST00000439977 CDC42SE1Q9NRR8 79 aa7.65□□□□□ -1.18
HERPUD1-204ENST00000439977 DMAC1Q96GE9 116 aa7.65□□□□□ -1.19
HERPUD1-204ENST00000439977 ATP11AUNQ6ZP68 121 aa7.64□□□□□ -1.19
HERPUD1-204ENST00000439977 SMR3BP02814 79 aaPredicted RBP7.63□□□□□ -1.19
HERPUD1-204ENST00000439977 FAT1Q14517 4588 aa7.58□□□□□ -1.2
HERPUD1-204ENST00000439977 C7orf65Q6ZTY9 151 aa7.57□□□□□ -1.2
HERPUD1-204ENST00000439977 A6NN06 94 aa7.56□□□□□ -1.2
HERPUD1-204ENST00000439977 A0A1B0GU69 56 aa7.55□□□□□ -1.2
HERPUD1-204ENST00000439977 SPINK1P00995 79 aa7.55□□□□□ -1.2
HERPUD1-204ENST00000439977 Q8N1X5 172 aa7.55□□□□□ -1.2
HERPUD1-204ENST00000439977 KTN1-AS1Q86SY8 53 aa7.53□□□□□ -1.2
HERPUD1-204ENST00000439977 SACSQ9NZJ4 4579 aa7.53□□□□□ -1.2
HERPUD1-204ENST00000439977 C9orf92A6NGG3 77 aa7.51□□□□□ -1.21
HERPUD1-204ENST00000439977 LINC00304Q8N9R0 145 aa7.51□□□□□ -1.21
HERPUD1-204ENST00000439977 DYNC1H1Q14204 4646 aaKnown RBP7.5□□□□□ -1.21
HERPUD1-204ENST00000439977 RBM12B-AS1Q9P1G2 102 aa7.41□□□□□ -1.22
HERPUD1-204ENST00000439977 MIR22HGQ0VDD5 57 aa7.4□□□□□ -1.23
HERPUD1-204ENST00000439977 UQCR11O14957 56 aa7.38□□□□□ -1.23
HERPUD1-204ENST00000439977 ADM2Q7Z4H4 148 aa7.38□□□□□ -1.23
HERPUD1-204ENST00000439977 PRAC1Q96KF2 57 aa7.38□□□□□ -1.23
HERPUD1-204ENST00000439977 APOBP04114 4563 aaKnown RBP7.37□□□□□ -1.23
HERPUD1-204ENST00000439977 SPATA8Q6RVD6 105 aa7.36□□□□□ -1.23
HERPUD1-204ENST00000439977 KMT2CQ8NEZ4 4911 aaKnown RBP7.33□□□□□ -1.24
HERPUD1-204ENST00000439977 RPS29P62273 56 aaKnown RBP7.31□□□□□ -1.24
HERPUD1-204ENST00000439977 KRTAP10-4P60372 401 aaPredicted RBP7.31□□□□□ -1.24
HERPUD1-204ENST00000439977 LRP1Q07954 4544 aaKnown RBP7.3□□□□□ -1.24
HERPUD1-204ENST00000439977 KRTAP3-1Q9BYR8 98 aa7.29□□□□□ -1.24
HERPUD1-204ENST00000439977 A0A1B0GVY2 172 aa7.28□□□□□ -1.24
HERPUD1-204ENST00000439977 A8MUU9 505 aa7.28□□□□□ -1.24
HERPUD1-204ENST00000439977 C20orf166-AS1Q96NR2 134 aa7.28□□□□□ -1.24
HERPUD1-204ENST00000439977 PKHD1L1Q86WI1 4243 aa7.27□□□□□ -1.25
HERPUD1-204ENST00000439977 FLG2Q5D862 2391 aaPredicted RBP7.24□□□□□ -1.25
HERPUD1-204ENST00000439977 RYR2Q92736 4967 aa7.24□□□□□ -1.25
HERPUD1-204ENST00000439977 DMBT1Q9UGM3 2413 aaPredicted RBP7.23□□□□□ -1.25
HERPUD1-204ENST00000439977 MYCBP2O75592 4640 aa7.23□□□□□ -1.25
HERPUD1-204ENST00000439977 H0YAA0 97 aa7.18□□□□□ -1.26
HERPUD1-204ENST00000439977 HSPG2P98160 4391 aa7.16□□□□□ -1.26
HERPUD1-204ENST00000439977 A0A1B0GU33 70 aa7.14□□□□□ -1.27
HERPUD1-204ENST00000439977 FAT3Q8TDW7 4589 aa7.13□□□□□ -1.27
HERPUD1-204ENST00000439977 KRTAP21-3Q3LHN1 58 aa7.13□□□□□ -1.27
HERPUD1-204ENST00000439977 CSAG1Q6PB30 78 aa7.11□□□□□ -1.27
HERPUD1-204ENST00000439977 TNXBP22105 4242 aa7.1□□□□□ -1.27
HERPUD1-204ENST00000439977 COX6B2Q6YFQ2 88 aa7.1□□□□□ -1.27
HERPUD1-204ENST00000439977 H1FX-AS1Q4G0G2 97 aa7.07□□□□□ -1.28
HERPUD1-204ENST00000439977 Q5VSD8 79 aa7.06□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms