RNA–Protein interactions for RNA: ENST00000439274.6

APP-208, Transcript of amyloid beta precursor protein, humanhuman

TSL 1 (best) BASIC

Gene APP, Length 2,517 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-208ENST00000439274 TP53AIP1Q9HCN2 124 aa9.16□□□□□ -0.94
APP-208ENST00000439274 ZNF861PO60384 105 aa9.14□□□□□ -0.95
APP-208ENST00000439274 CDK2AP2O75956 126 aa9.14□□□□□ -0.95
APP-208ENST00000439274 Q6ZR54 194 aa9.14□□□□□ -0.95
APP-208ENST00000439274 PLAC8Q9NZF1 115 aa9.13□□□□□ -0.95
APP-208ENST00000439274 PRR15LQ9BU68 103 aa9.12□□□□□ -0.95
APP-208ENST00000439274 TGP01266 2768 aa9.12□□□□□ -0.95
APP-208ENST00000439274 MRPL34Q9BQ48 92 aaKnown RBP9.12□□□□□ -0.95
APP-208ENST00000439274 SPINK6Q6UWN8 80 aa9.11□□□□□ -0.95
APP-208ENST00000439274 LIMD2Q9BT23 127 aa9.1□□□□□ -0.95
APP-208ENST00000439274 CHKB-CPT1BH3BT56 60 aa9.09□□□□□ -0.95
APP-208ENST00000439274 ALMS1Q8TCU4 4167 aa9.07□□□□□ -0.96
APP-208ENST00000439274 CIRBP-AS1Q8TBR5 109 aa9.06□□□□□ -0.96
APP-208ENST00000439274 DNAH6Q9C0G6 4158 aa9.06□□□□□ -0.96
APP-208ENST00000439274 IGLV7-43P04211 117 aa9.03□□□□□ -0.96
APP-208ENST00000439274 Q5W150 140 aa9.03□□□□□ -0.96
APP-208ENST00000439274 DNAH11Q96DT5 4516 aa9.03□□□□□ -0.96
APP-208ENST00000439274 SPAG11AQ6PDA7 123 aa9.02□□□□□ -0.96
APP-208ENST00000439274 HRES1P13985 223 aa9.02□□□□□ -0.97
APP-208ENST00000439274 DNAH5Q8TE73 4624 aa9□□□□□ -0.97
APP-208ENST00000439274 C1orf134Q5TEV5 83 aa9□□□□□ -0.97
APP-208ENST00000439274 LOC101927531A0A1B0GV80 90 aa8.99□□□□□ -0.97
APP-208ENST00000439274 Q75L30 129 aa8.99□□□□□ -0.97
APP-208ENST00000439274 A6NED7 52 aa8.97□□□□□ -0.97
APP-208ENST00000439274 LCA10Q71F78 164 aa8.97□□□□□ -0.97
APP-208ENST00000439274 KRTAP13-3Q3SY46 172 aa8.96□□□□□ -0.97
APP-208ENST00000439274 PMAIP1Q13794 54 aa8.95□□□□□ -0.98
APP-208ENST00000439274 LY6G6CO95867 125 aa8.94□□□□□ -0.98
APP-208ENST00000439274 LINC01558Q9Y6Z2 57 aa8.94□□□□□ -0.98
APP-208ENST00000439274 SPTSSBQ8NFR3 76 aa8.93□□□□□ -0.98
APP-208ENST00000439274 KRTAP10-2P60368 255 aa8.92□□□□□ -0.98
APP-208ENST00000439274 RETNLBQ9BQ08 111 aa8.91□□□□□ -0.98
APP-208ENST00000439274 PRR26Q8N8Z3 221 aa8.9□□□□□ -0.98
APP-208ENST00000439274 SSBP3-AS1Q7Z2R9 100 aa8.9□□□□□ -0.99
APP-208ENST00000439274 LRP1BQ9NZR2 4599 aa8.9□□□□□ -0.99
APP-208ENST00000439274 HYDINQ4G0P3 5121 aa8.88□□□□□ -0.99
APP-208ENST00000439274 KRTAP13-2Q52LG2 175 aa8.87□□□□□ -0.99
APP-208ENST00000439274 C8orf87E5RJ46 101 aa8.86□□□□□ -0.99
APP-208ENST00000439274 SPINK7P58062 85 aa8.86□□□□□ -0.99
APP-208ENST00000439274 LINC00313P59037 77 aa8.86□□□□□ -0.99
APP-208ENST00000439274 CDC42SE1Q9NRR8 79 aa8.84□□□□□ -0.99
APP-208ENST00000439274 ATP11AUNQ6ZP68 121 aa8.82□□□□□ -1
APP-208ENST00000439274 PKD1P98161 4303 aa8.82□□□□□ -1
APP-208ENST00000439274 ACYP2P14621 99 aa8.8□□□□□ -1
APP-208ENST00000439274 FAT2Q9NYQ8 4349 aa8.79□□□□□ -1
APP-208ENST00000439274 KRTAP10-1P60331 282 aa8.79□□□□□ -1
APP-208ENST00000439274 SEC61GP60059 68 aa8.79□□□□□ -1
APP-208ENST00000439274 SACSQ9NZJ4 4579 aa8.79□□□□□ -1
APP-208ENST00000439274 FAM229AH3BQW9 127 aa8.78□□□□□ -1
APP-208ENST00000439274 DMAC1Q96GE9 116 aa8.77□□□□□ -1.01
APP-208ENST00000439274 VPS13BQ7Z7G8 4022 aa8.76□□□□□ -1.01
APP-208ENST00000439274 A6NN06 94 aa8.75□□□□□ -1.01
APP-208ENST00000439274 KRTAP16-1A8MUX0 517 aa8.75□□□□□ -1.01
APP-208ENST00000439274 IGKV2-30P06310 120 aa8.75□□□□□ -1.01
APP-208ENST00000439274 Q6ZSA8 131 aa8.74□□□□□ -1.01
APP-208ENST00000439274 KRTAP1-4P0C5Y4 121 aa8.73□□□□□ -1.01
APP-208ENST00000439274 KTN1-AS1Q86SY8 53 aa8.72□□□□□ -1.01
APP-208ENST00000439274 IGKV2D-30A0A075B6S6 120 aa8.69□□□□□ -1.02
APP-208ENST00000439274 PLA2G1BP04054 148 aaKnown RBP8.64□□□□□ -1.03
APP-208ENST00000439274 A0A1B0GU69 56 aa8.62□□□□□ -1.03
APP-208ENST00000439274 TYMSOSQ8TAI1 123 aa8.61□□□□□ -1.03
APP-208ENST00000439274 C4orf48Q5BLP8 95 aa8.61□□□□□ -1.03
APP-208ENST00000439274 C7orf65Q6ZTY9 151 aa8.59□□□□□ -1.03
APP-208ENST00000439274 RYR2Q92736 4967 aa8.59□□□□□ -1.03
APP-208ENST00000439274 PKHD1P08F94 4074 aa8.59□□□□□ -1.03
APP-208ENST00000439274 RBM12B-AS1Q9P1G2 102 aa8.56□□□□□ -1.04
APP-208ENST00000439274 SPINK1P00995 79 aa8.54□□□□□ -1.04
APP-208ENST00000439274 KMT2CQ8NEZ4 4911 aaKnown RBP8.53□□□□□ -1.04
APP-208ENST00000439274 Q8N1X5 172 aa8.51□□□□□ -1.05
APP-208ENST00000439274 DYNC1H1Q14204 4646 aaKnown RBP8.49□□□□□ -1.05
APP-208ENST00000439274 SPATA8Q6RVD6 105 aa8.48□□□□□ -1.05
APP-208ENST00000439274 LINC00304Q8N9R0 145 aa8.48□□□□□ -1.05
APP-208ENST00000439274 A0A1B0GVY2 172 aa8.48□□□□□ -1.05
APP-208ENST00000439274 MIR22HGQ0VDD5 57 aa8.46□□□□□ -1.05
APP-208ENST00000439274 UQCR11O14957 56 aa8.45□□□□□ -1.06
APP-208ENST00000439274 SMR3BP02814 79 aaPredicted RBP8.45□□□□□ -1.06
APP-208ENST00000439274 PRAC1Q96KF2 57 aa8.43□□□□□ -1.06
APP-208ENST00000439274 FAT1Q14517 4588 aa8.43□□□□□ -1.06
APP-208ENST00000439274 ADM2Q7Z4H4 148 aa8.42□□□□□ -1.06
APP-208ENST00000439274 C9orf92A6NGG3 77 aa8.42□□□□□ -1.06
APP-208ENST00000439274 APOBP04114 4563 aaKnown RBP8.4□□□□□ -1.06
APP-208ENST00000439274 RYR3Q15413 4870 aa8.37□□□□□ -1.07
APP-208ENST00000439274 RPS29P62273 56 aaKnown RBP8.37□□□□□ -1.07
APP-208ENST00000439274 PKHD1L1Q86WI1 4243 aa8.35□□□□□ -1.07
APP-208ENST00000439274 A8MUU9 505 aa8.3□□□□□ -1.08
APP-208ENST00000439274 C20orf166-AS1Q96NR2 134 aa8.3□□□□□ -1.08
APP-208ENST00000439274 KRTAP3-1Q9BYR8 98 aa8.29□□□□□ -1.08
APP-208ENST00000439274 KRTAP10-4P60372 401 aaPredicted RBP8.26□□□□□ -1.09
APP-208ENST00000439274 H0YAA0 97 aa8.21□□□□□ -1.1
APP-208ENST00000439274 HSPG2P98160 4391 aa8.16□□□□□ -1.1
APP-208ENST00000439274 CSAG1Q6PB30 78 aa8.14□□□□□ -1.11
APP-208ENST00000439274 FLG2Q5D862 2391 aaPredicted RBP8.14□□□□□ -1.11
APP-208ENST00000439274 A0A1B0GU33 70 aa8.13□□□□□ -1.11
APP-208ENST00000439274 FAT3Q8TDW7 4589 aa8.12□□□□□ -1.11
APP-208ENST00000439274 LRP1Q07954 4544 aaKnown RBP8.12□□□□□ -1.11
APP-208ENST00000439274 H1FX-AS1Q4G0G2 97 aa8.1□□□□□ -1.11
APP-208ENST00000439274 LINC01554Q52M75 96 aa8.09□□□□□ -1.11
APP-208ENST00000439274 RYR1P21817 5038 aa8.09□□□□□ -1.11
APP-208ENST00000439274 KRTAP17-1Q9BYP8 105 aa8.09□□□□□ -1.11
APP-208ENST00000439274 COX6B2Q6YFQ2 88 aa8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 6.5 ms