RNA–Protein interactions for RNA: ENST00000438796.6

LRCH3-206, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

APPRIS P5 TSL 2 BASIC

Gene LRCH3, Length 7,394 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-206ENST00000438796 APCP25054 2843 aa7.48□□□□□ -1.21
LRCH3-206ENST00000438796 TRANK1O15050 2925 aa7.47□□□□□ -1.21
LRCH3-206ENST00000438796 DMXL2Q8TDJ6 3036 aa7.47□□□□□ -1.21
LRCH3-206ENST00000438796 KRTAP13-1Q8IUC0 172 aa7.47□□□□□ -1.21
LRCH3-206ENST00000438796 KMT2BQ9UMN6 2715 aaPredicted RBP7.46□□□□□ -1.22
LRCH3-206ENST00000438796 KRTAP10-10P60014 251 aa7.43□□□□□ -1.22
LRCH3-206ENST00000438796 USP34Q70CQ2 3546 aa7.4□□□□□ -1.23
LRCH3-206ENST00000438796 XP32Q5T750 250 aa7.38□□□□□ -1.23
LRCH3-206ENST00000438796 ASH1LQ9NR48 2969 aaKnown RBP7.37□□□□□ -1.23
LRCH3-206ENST00000438796 NSD1Q96L73 2696 aaPredicted RBP7.36□□□□□ -1.23
LRCH3-206ENST00000438796 BOD1L1Q8NFC6 3051 aa7.36□□□□□ -1.23
LRCH3-206ENST00000438796 UBR5O95071 2799 aaPredicted RBP7.33□□□□□ -1.24
LRCH3-206ENST00000438796 SPTBN5Q9NRC6 3674 aaKnown RBP7.32□□□□□ -1.24
LRCH3-206ENST00000438796 UTP20O75691 2785 aaKnown RBP7.32□□□□□ -1.24
LRCH3-206ENST00000438796 IGSF10Q6WRI0 2623 aa7.32□□□□□ -1.24
LRCH3-206ENST00000438796 TACC2O95359 2948 aa7.31□□□□□ -1.24
LRCH3-206ENST00000438796 FRYLO94915 3013 aa7.3□□□□□ -1.24
LRCH3-206ENST00000438796 HIVEP1P15822 2718 aa7.28□□□□□ -1.24
LRCH3-206ENST00000438796 ATMQ13315 3056 aa7.28□□□□□ -1.24
LRCH3-206ENST00000438796 COL12A1Q99715 3063 aa7.27□□□□□ -1.25
LRCH3-206ENST00000438796 PRO2289Q9P1D8 64 aa7.23□□□□□ -1.25
LRCH3-206ENST00000438796 KRTAP21-3Q3LHN1 58 aa7.23□□□□□ -1.25
LRCH3-206ENST00000438796 KRTAP1-4P0C5Y4 121 aa7.2□□□□□ -1.26
LRCH3-206ENST00000438796 ITPR1Q14643 2758 aa7.19□□□□□ -1.26
LRCH3-206ENST00000438796 PP632Q6XCG6 107 aa7.19□□□□□ -1.26
LRCH3-206ENST00000438796 ADGRG4Q8IZF6 3080 aa7.19□□□□□ -1.26
LRCH3-206ENST00000438796 H0YAA0 97 aa7.16□□□□□ -1.26
LRCH3-206ENST00000438796 TPRXLQ17RH7 258 aa7.15□□□□□ -1.27
LRCH3-206ENST00000438796 ASPMQ8IZT6 3477 aa7.14□□□□□ -1.27
LRCH3-206ENST00000438796 EYSQ5T1H1 3165 aa7.14□□□□□ -1.27
LRCH3-206ENST00000438796 P0C880 135 aa7.12□□□□□ -1.27
LRCH3-206ENST00000438796 MYO15AQ9UKN7 3530 aa7.11□□□□□ -1.27
LRCH3-206ENST00000438796 ZZEF1O43149 2961 aa7.11□□□□□ -1.27
LRCH3-206ENST00000438796 WDFY3Q8IZQ1 3526 aa7.09□□□□□ -1.28
LRCH3-206ENST00000438796 CELSR2Q9HCU4 2923 aa7.07□□□□□ -1.28
LRCH3-206ENST00000438796 LOC400499M0QZD8 3231 aa7.06□□□□□ -1.28
LRCH3-206ENST00000438796 NBPF19A0A087WUL8 3843 aa7.05□□□□□ -1.28
LRCH3-206ENST00000438796 NBEAQ8NFP9 2946 aa7.05□□□□□ -1.28
LRCH3-206ENST00000438796 DCHS1Q96JQ0 3298 aa7.03□□□□□ -1.28
LRCH3-206ENST00000438796 KRTAP13-3Q3SY46 172 aa7.02□□□□□ -1.28
LRCH3-206ENST00000438796 TNRC18O15417 2968 aaPredicted RBP6.98□□□□□ -1.29
LRCH3-206ENST00000438796 TENM4Q6N022 2769 aa6.94□□□□□ -1.3
LRCH3-206ENST00000438796 TENM1Q9UKZ4 2725 aa6.94□□□□□ -1.3
LRCH3-206ENST00000438796 DCHS2Q6V1P9 2916 aa6.93□□□□□ -1.3
LRCH3-206ENST00000438796 DMXL1Q9Y485 3027 aa6.91□□□□□ -1.3
LRCH3-206ENST00000438796 ZFHX4Q86UP3 3567 aa6.91□□□□□ -1.3
LRCH3-206ENST00000438796 CELSR1Q9NYQ6 3014 aa6.91□□□□□ -1.3
LRCH3-206ENST00000438796 KRTAP12-2P59991 146 aa6.85□□□□□ -1.31
LRCH3-206ENST00000438796 LAMA5O15230 3695 aa6.85□□□□□ -1.31
LRCH3-206ENST00000438796 FLNCQ14315 2725 aa6.84□□□□□ -1.31
LRCH3-206ENST00000438796 CSMD1Q96PZ7 3565 aa6.82□□□□□ -1.32
LRCH3-206ENST00000438796 TENM2Q9NT68 2774 aa6.81□□□□□ -1.32
LRCH3-206ENST00000438796 RELNP78509 3460 aa6.77□□□□□ -1.33
LRCH3-206ENST00000438796 NF1P21359 2839 aa6.75□□□□□ -1.33
LRCH3-206ENST00000438796 FBN2P35556 2912 aa6.75□□□□□ -1.33
LRCH3-206ENST00000438796 TGP01266 2768 aa6.73□□□□□ -1.33
LRCH3-206ENST00000438796 KRTAP15-1Q3LI76 137 aa6.69□□□□□ -1.34
LRCH3-206ENST00000438796 CRCT1Q9UGL9 99 aa6.67□□□□□ -1.34
LRCH3-206ENST00000438796 ZANQ9Y493 2812 aa6.66□□□□□ -1.34
LRCH3-206ENST00000438796 KRTAP13-4Q3LI77 160 aa6.65□□□□□ -1.34
LRCH3-206ENST00000438796 HRNRQ86YZ3 2850 aaPredicted RBP6.65□□□□□ -1.34
LRCH3-206ENST00000438796 NIPBLQ6KC79 2804 aaeCLIP6.65□□□□□ -1.35
LRCH3-206ENST00000438796 PKD1L1Q8TDX9 2849 aa6.62□□□□□ -1.35
LRCH3-206ENST00000438796 TENM3Q9P273 2699 aa6.61□□□□□ -1.35
LRCH3-206ENST00000438796 VWFP04275 2813 aa6.61□□□□□ -1.35
LRCH3-206ENST00000438796 KRTAP12-1P59990 96 aa6.6□□□□□ -1.35
LRCH3-206ENST00000438796 PDZD2O15018 2839 aa6.54□□□□□ -1.36
LRCH3-206ENST00000438796 ZFHX3Q15911 3703 aa6.53□□□□□ -1.36
LRCH3-206ENST00000438796 SPENQ96T58 3664 aaKnown RBP6.53□□□□□ -1.36
LRCH3-206ENST00000438796 SMG1Q96Q15 3661 aaKnown RBP6.52□□□□□ -1.37
LRCH3-206ENST00000438796 MXRA5Q9NR99 2828 aa6.47□□□□□ -1.37
LRCH3-206ENST00000438796 KRTAP3-1Q9BYR8 98 aa6.42□□□□□ -1.38
LRCH3-206ENST00000438796 DMDP11532 3685 aa6.41□□□□□ -1.38
LRCH3-206ENST00000438796 SVEP1Q4LDE5 3571 aa6.4□□□□□ -1.39
LRCH3-206ENST00000438796 CUBNO60494 3623 aa6.37□□□□□ -1.39
LRCH3-206ENST00000438796 CSMD2Q7Z408 3487 aa6.28□□□□□ -1.4
LRCH3-206ENST00000438796 KRTAP10-12P60413 245 aa6.27□□□□□ -1.41
LRCH3-206ENST00000438796 MUC3AQ02505 3323 aa6.24□□□□□ -1.41
LRCH3-206ENST00000438796 ANK3Q12955 4377 aaKnown RBP6.23□□□□□ -1.41
LRCH3-206ENST00000438796 KRTAP10-6P60371 365 aaPredicted RBP6.21□□□□□ -1.42
LRCH3-206ENST00000438796 TRRAPQ9Y4A5 3859 aa6.19□□□□□ -1.42
LRCH3-206ENST00000438796 KRTAP4-5Q9BYR2 181 aa6.18□□□□□ -1.42
LRCH3-206ENST00000438796 MEGF8Q7Z7M0 2845 aa6.14□□□□□ -1.43
LRCH3-206ENST00000438796 VPS13CQ709C8 3753 aa6.12□□□□□ -1.43
LRCH3-206ENST00000438796 COL7A1Q02388 2944 aa6.12□□□□□ -1.43
LRCH3-206ENST00000438796 MT1HL1P0DM35 61 aa6.11□□□□□ -1.43
LRCH3-206ENST00000438796 FBN3Q75N90 2809 aa6.09□□□□□ -1.43
LRCH3-206ENST00000438796 SRRM2Q9UQ35 2752 aaKnown RBP6.07□□□□□ -1.44
LRCH3-206ENST00000438796 CSMD3Q7Z407 3707 aa6.07□□□□□ -1.44
LRCH3-206ENST00000438796 FBN1P35555 2871 aaKnown RBP6.06□□□□□ -1.44
LRCH3-206ENST00000438796 HUWE1Q7Z6Z7 4374 aaKnown RBP6.06□□□□□ -1.44
LRCH3-206ENST00000438796 BSNQ9UPA5 3926 aa6.03□□□□□ -1.44
LRCH3-206ENST00000438796 KRTAP12-3P60328 96 aa6.02□□□□□ -1.45
LRCH3-206ENST00000438796 LCE3AQ5TA76 89 aa6.02□□□□□ -1.45
LRCH3-206ENST00000438796 INE1O15225 51 aa5.99□□□□□ -1.45
LRCH3-206ENST00000438796 LORP23490 312 aaPredicted RBP5.99□□□□□ -1.45
LRCH3-206ENST00000438796 KRTAP3-3Q9BYR6 98 aa5.98□□□□□ -1.45
LRCH3-206ENST00000438796 KRTAP10-5P60370 271 aa5.97□□□□□ -1.45
LRCH3-206ENST00000438796 KRTAP3-2Q9BYR7 98 aa5.94□□□□□ -1.46
LRCH3-206ENST00000438796 ALMS1Q8TCU4 4167 aa5.92□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 254.3 ms