RNA–Protein interactions for RNA: ENST00000430297.6

RETREG2-203, Transcript of reticulophagy regulator family member 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RETREG2, Length 4,618 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG2-203ENST00000430297 CELSR1Q9NYQ6 3014 aa11.47□□□□□ -0.57
RETREG2-203ENST00000430297 LINC01558Q9Y6Z2 57 aa11.44□□□□□ -0.58
RETREG2-203ENST00000430297 A0A087X002 238 aa11.43□□□□□ -0.58
RETREG2-203ENST00000430297 TENM3Q9P273 2699 aa11.43□□□□□ -0.58
RETREG2-203ENST00000430297 Q75L30 129 aa11.42□□□□□ -0.58
RETREG2-203ENST00000430297 TENM1Q9UKZ4 2725 aa11.37□□□□□ -0.59
RETREG2-203ENST00000430297 Q6ZSA8 131 aa11.36□□□□□ -0.59
RETREG2-203ENST00000430297 SPINK7P58062 85 aa11.35□□□□□ -0.59
RETREG2-203ENST00000430297 NOTCH2NLQ7Z3S9 236 aa11.34□□□□□ -0.59
RETREG2-203ENST00000430297 KRTAP13-1Q8IUC0 172 aa11.34□□□□□ -0.59
RETREG2-203ENST00000430297 A0A0D9SG42 100 aa11.33□□□□□ -0.6
RETREG2-203ENST00000430297 Q5VV11 94 aa11.33□□□□□ -0.6
RETREG2-203ENST00000430297 H3BS24 57 aa11.32□□□□□ -0.6
RETREG2-203ENST00000430297 A0A1B0GU33 70 aa11.3□□□□□ -0.6
RETREG2-203ENST00000430297 Q5VSD8 79 aa11.29□□□□□ -0.6
RETREG2-203ENST00000430297 PDZD2O15018 2839 aa11.28□□□□□ -0.6
RETREG2-203ENST00000430297 SMG1Q96Q15 3661 aaKnown RBP11.27□□□□□ -0.61
RETREG2-203ENST00000430297 LINC01554Q52M75 96 aa11.24□□□□□ -0.61
RETREG2-203ENST00000430297 DMAC1Q96GE9 116 aa11.24□□□□□ -0.61
RETREG2-203ENST00000430297 CRIPTQ9P021 101 aa11.24□□□□□ -0.61
RETREG2-203ENST00000430297 ASB16-AS1Q495Z4 193 aa11.21□□□□□ -0.61
RETREG2-203ENST00000430297 VWFP04275 2813 aa11.21□□□□□ -0.62
RETREG2-203ENST00000430297 CSMD1Q96PZ7 3565 aa11.2□□□□□ -0.62
RETREG2-203ENST00000430297 FBN1P35555 2871 aaKnown RBP11.19□□□□□ -0.62
RETREG2-203ENST00000430297 PRAC1Q96KF2 57 aa11.17□□□□□ -0.62
RETREG2-203ENST00000430297 OTOGQ6ZRI0 2925 aa11.16□□□□□ -0.62
RETREG2-203ENST00000430297 KRTAP13-2Q52LG2 175 aa11.16□□□□□ -0.62
RETREG2-203ENST00000430297 PKD1L1Q8TDX9 2849 aa11.13□□□□□ -0.63
RETREG2-203ENST00000430297 CSAG1Q6PB30 78 aa11.1□□□□□ -0.63
RETREG2-203ENST00000430297 S4R3F8 94 aa11.08□□□□□ -0.64
RETREG2-203ENST00000430297 SVEP1Q4LDE5 3571 aa11.03□□□□□ -0.64
RETREG2-203ENST00000430297 RPS29P62273 56 aaKnown RBP11.02□□□□□ -0.64
RETREG2-203ENST00000430297 TGP01266 2768 aa11.01□□□□□ -0.65
RETREG2-203ENST00000430297 TENM2Q9NT68 2774 aa11.01□□□□□ -0.65
RETREG2-203ENST00000430297 KRTAP21-3Q3LHN1 58 aa11.01□□□□□ -0.65
RETREG2-203ENST00000430297 NBPF19A0A087WUL8 3843 aa10.96□□□□□ -0.66
RETREG2-203ENST00000430297 SEC61BP60468 96 aaKnown RBP10.96□□□□□ -0.66
RETREG2-203ENST00000430297 ZFHX3Q15911 3703 aa10.89□□□□□ -0.67
RETREG2-203ENST00000430297 CUBNO60494 3623 aa10.86□□□□□ -0.67
RETREG2-203ENST00000430297 CAMK2N1Q7Z7J9 78 aa10.85□□□□□ -0.67
RETREG2-203ENST00000430297 SPENQ96T58 3664 aaKnown RBP10.85□□□□□ -0.67
RETREG2-203ENST00000430297 H1FX-AS1Q4G0G2 97 aa10.84□□□□□ -0.67
RETREG2-203ENST00000430297 LUZP6Q538Z0 58 aa10.83□□□□□ -0.68
RETREG2-203ENST00000430297 R4GN34 69 aa10.82□□□□□ -0.68
RETREG2-203ENST00000430297 CSMD2Q7Z408 3487 aa10.81□□□□□ -0.68
RETREG2-203ENST00000430297 M0R2T5 61 aa10.8□□□□□ -0.68
RETREG2-203ENST00000430297 RPL37P61927 97 aaKnown RBP10.8□□□□□ -0.68
RETREG2-203ENST00000430297 KRTAP1-4P0C5Y4 121 aa10.78□□□□□ -0.68
RETREG2-203ENST00000430297 A8MU10 97 aa10.77□□□□□ -0.69
RETREG2-203ENST00000430297 SPATA8Q6RVD6 105 aa10.75□□□□□ -0.69
RETREG2-203ENST00000430297 A8MUU9 505 aa10.66□□□□□ -0.7
RETREG2-203ENST00000430297 ADM2Q7Z4H4 148 aa10.65□□□□□ -0.7
RETREG2-203ENST00000430297 M0QZ58 72 aa10.64□□□□□ -0.71
RETREG2-203ENST00000430297 C20orf166-AS1Q96NR2 134 aa10.63□□□□□ -0.71
RETREG2-203ENST00000430297 BSNQ9UPA5 3926 aa10.62□□□□□ -0.71
RETREG2-203ENST00000430297 A6NN06 94 aa10.62□□□□□ -0.71
RETREG2-203ENST00000430297 ROMO1P60602 79 aa10.6□□□□□ -0.71
RETREG2-203ENST00000430297 A0A0A0MQY5 61 aa10.52□□□□□ -0.73
RETREG2-203ENST00000430297 ANK3Q12955 4377 aaKnown RBP10.5□□□□□ -0.73
RETREG2-203ENST00000430297 TRRAPQ9Y4A5 3859 aa10.49□□□□□ -0.73
RETREG2-203ENST00000430297 SRRM2Q9UQ35 2752 aaKnown RBP10.48□□□□□ -0.73
RETREG2-203ENST00000430297 KRTAP16-1A8MUX0 517 aa10.45□□□□□ -0.74
RETREG2-203ENST00000430297 FBN3Q75N90 2809 aa10.42□□□□□ -0.74
RETREG2-203ENST00000430297 XP32Q5T750 250 aa10.36□□□□□ -0.75
RETREG2-203ENST00000430297 MEGF8Q7Z7M0 2845 aa10.26□□□□□ -0.77
RETREG2-203ENST00000430297 KRTAP13-3Q3SY46 172 aa10.23□□□□□ -0.77
RETREG2-203ENST00000430297 KRTAP25-1Q3LHN0 102 aa10.22□□□□□ -0.77
RETREG2-203ENST00000430297 A0A1B0GVY2 172 aa10.21□□□□□ -0.77
RETREG2-203ENST00000430297 PLAC4Q8WY50 150 aa10.18□□□□□ -0.78
RETREG2-203ENST00000430297 NDUFAF8A1L188 74 aa10.16□□□□□ -0.78
RETREG2-203ENST00000430297 COL7A1Q02388 2944 aa10.13□□□□□ -0.79
RETREG2-203ENST00000430297 TPRXLQ17RH7 258 aa10.13□□□□□ -0.79
RETREG2-203ENST00000430297 KRTAP10-8P60410 259 aa10.11□□□□□ -0.79
RETREG2-203ENST00000430297 VPS13CQ709C8 3753 aa10.09□□□□□ -0.79
RETREG2-203ENST00000430297 H0YAA0 97 aa10.07□□□□□ -0.8
RETREG2-203ENST00000430297 ZNF469Q96JG9 3925 aaPredicted RBP9.91□□□□□ -0.82
RETREG2-203ENST00000430297 P0C880 135 aa9.89□□□□□ -0.83
RETREG2-203ENST00000430297 TNP1P09430 55 aa9.79□□□□□ -0.84
RETREG2-203ENST00000430297 C10orf95Q9H7T3 257 aa9.77□□□□□ -0.85
RETREG2-203ENST00000430297 HUWE1Q7Z6Z7 4374 aaKnown RBP9.73□□□□□ -0.85
RETREG2-203ENST00000430297 KRTAP3-1Q9BYR8 98 aa9.72□□□□□ -0.85
RETREG2-203ENST00000430297 PP632Q6XCG6 107 aa9.57□□□□□ -0.88
RETREG2-203ENST00000430297 AKAP9Q99996 3911 aa9.55□□□□□ -0.88
RETREG2-203ENST00000430297 CSMD3Q7Z407 3707 aa9.53□□□□□ -0.88
RETREG2-203ENST00000430297 KRTAP10-10P60014 251 aa9.51□□□□□ -0.89
RETREG2-203ENST00000430297 KRTAP10-4P60372 401 aaPredicted RBP9.45□□□□□ -0.9
RETREG2-203ENST00000430297 KRTAP12-2P59991 146 aa9.44□□□□□ -0.9
RETREG2-203ENST00000430297 MT1HL1P0DM35 61 aa9.44□□□□□ -0.9
RETREG2-203ENST00000430297 DNAH9Q9NYC9 4486 aa9.4□□□□□ -0.9
RETREG2-203ENST00000430297 KRTAP10-6P60371 365 aaPredicted RBP9.35□□□□□ -0.91
RETREG2-203ENST00000430297 KRTAP12-1P59990 96 aa9.35□□□□□ -0.91
RETREG2-203ENST00000430297 KRTAP13-4Q3LI77 160 aa9.29□□□□□ -0.92
RETREG2-203ENST00000430297 PLECQ15149 4684 aaKnown RBP9.23□□□□□ -0.93
RETREG2-203ENST00000430297 DNHD1Q96M86 4753 aa9.2□□□□□ -0.94
RETREG2-203ENST00000430297 DNAH5Q8TE73 4624 aa9.17□□□□□ -0.94
RETREG2-203ENST00000430297 KRTAP3-3Q9BYR6 98 aa9.16□□□□□ -0.94
RETREG2-203ENST00000430297 PRO2289Q9P1D8 64 aa9.14□□□□□ -0.95
RETREG2-203ENST00000430297 KRTAP4-5Q9BYR2 181 aa9.14□□□□□ -0.95
RETREG2-203ENST00000430297 DNAH1Q9P2D7 4330 aa9.13□□□□□ -0.95
RETREG2-203ENST00000430297 DNAH11Q96DT5 4516 aa9.12□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 9.5 ms