RNA–Protein interactions for RNA: ENST00000429976.5

TRANK1-201, Transcript of tetratricopeptide repeat and ankyrin repeat containing 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TRANK1, Length 10,481 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRANK1-201ENST00000429976 VPS13AQ96RL7 3174 aa5.3□□□□□ -1.56
TRANK1-201ENST00000429976 CELSR3Q9NYQ7 3312 aa5.28□□□□□ -1.56
TRANK1-201ENST00000429976 PP632Q6XCG6 107 aa5.27□□□□□ -1.57
TRANK1-201ENST00000429976 ASH1LQ9NR48 2969 aaKnown RBP5.25□□□□□ -1.57
TRANK1-201ENST00000429976 XP32Q5T750 250 aa5.25□□□□□ -1.57
TRANK1-201ENST00000429976 DNAH14Q0VDD8 3507 aa5.24□□□□□ -1.57
TRANK1-201ENST00000429976 UNC80Q8N2C7 3258 aa5.24□□□□□ -1.57
TRANK1-201ENST00000429976 NBEAQ8NFP9 2946 aa5.22□□□□□ -1.57
TRANK1-201ENST00000429976 KRTAP1-4P0C5Y4 121 aa5.2□□□□□ -1.58
TRANK1-201ENST00000429976 CRYBG3Q68DQ2 2970 aa5.2□□□□□ -1.58
TRANK1-201ENST00000429976 SZT2Q5T011 3432 aa5.19□□□□□ -1.58
TRANK1-201ENST00000429976 COL6A3P12111 3177 aa5.19□□□□□ -1.58
TRANK1-201ENST00000429976 FLNCQ14315 2725 aa5.19□□□□□ -1.58
TRANK1-201ENST00000429976 KRTAP10-10P60014 251 aa5.18□□□□□ -1.58
TRANK1-201ENST00000429976 TACC2O95359 2948 aa5.18□□□□□ -1.58
TRANK1-201ENST00000429976 DMXL2Q8TDJ6 3036 aa5.17□□□□□ -1.58
TRANK1-201ENST00000429976 EYSQ5T1H1 3165 aa5.16□□□□□ -1.58
TRANK1-201ENST00000429976 FRYLO94915 3013 aa5.12□□□□□ -1.59
TRANK1-201ENST00000429976 LAMA1P25391 3075 aa5.11□□□□□ -1.59
TRANK1-201ENST00000429976 CELSR2Q9HCU4 2923 aa5.11□□□□□ -1.59
TRANK1-201ENST00000429976 ATMQ13315 3056 aa5.1□□□□□ -1.59
TRANK1-201ENST00000429976 REV3LO60673 3130 aa5.1□□□□□ -1.59
TRANK1-201ENST00000429976 SPTBN5Q9NRC6 3674 aaKnown RBP5.1□□□□□ -1.59
TRANK1-201ENST00000429976 PRO2289Q9P1D8 64 aa5.1□□□□□ -1.59
TRANK1-201ENST00000429976 VCANP13611 3396 aa5.09□□□□□ -1.6
TRANK1-201ENST00000429976 BOD1L1Q8NFC6 3051 aa5.08□□□□□ -1.6
TRANK1-201ENST00000429976 TNRC18O15417 2968 aaPredicted RBP5.07□□□□□ -1.6
TRANK1-201ENST00000429976 USP34Q70CQ2 3546 aa5.07□□□□□ -1.6
TRANK1-201ENST00000429976 CFAP47Q6ZTR5 3102 aa5.06□□□□□ -1.6
TRANK1-201ENST00000429976 KRTAP12-2P59991 146 aa5.03□□□□□ -1.6
TRANK1-201ENST00000429976 ZZEF1O43149 2961 aa5.03□□□□□ -1.6
TRANK1-201ENST00000429976 COL12A1Q99715 3063 aa5.03□□□□□ -1.6
TRANK1-201ENST00000429976 HRNRQ86YZ3 2850 aaPredicted RBP5.02□□□□□ -1.61
TRANK1-201ENST00000429976 TGP01266 2768 aa5.02□□□□□ -1.61
TRANK1-201ENST00000429976 TPRXLQ17RH7 258 aa5.01□□□□□ -1.61
TRANK1-201ENST00000429976 NIPBLQ6KC79 2804 aaeCLIP5.01□□□□□ -1.61
TRANK1-201ENST00000429976 DCHS2Q6V1P9 2916 aa5□□□□□ -1.61
TRANK1-201ENST00000429976 KRTAP13-3Q3SY46 172 aa5□□□□□ -1.61
TRANK1-201ENST00000429976 ADGRG4Q8IZF6 3080 aa4.99□□□□□ -1.61
TRANK1-201ENST00000429976 ZANQ9Y493 2812 aa4.99□□□□□ -1.61
TRANK1-201ENST00000429976 TENM1Q9UKZ4 2725 aa4.97□□□□□ -1.61
TRANK1-201ENST00000429976 TENM4Q6N022 2769 aa4.97□□□□□ -1.61
TRANK1-201ENST00000429976 TENM3Q9P273 2699 aa4.94□□□□□ -1.62
TRANK1-201ENST00000429976 FBN2P35556 2912 aa4.93□□□□□ -1.62
TRANK1-201ENST00000429976 NF1P21359 2839 aa4.91□□□□□ -1.62
TRANK1-201ENST00000429976 SPEGQ15772 3267 aa4.89□□□□□ -1.63
TRANK1-201ENST00000429976 MYO15AQ9UKN7 3530 aa4.89□□□□□ -1.63
TRANK1-201ENST00000429976 KRTAP15-1Q3LI76 137 aa4.88□□□□□ -1.63
TRANK1-201ENST00000429976 CRCT1Q9UGL9 99 aa4.87□□□□□ -1.63
TRANK1-201ENST00000429976 KRTAP13-4Q3LI77 160 aa4.84□□□□□ -1.63
TRANK1-201ENST00000429976 TENM2Q9NT68 2774 aa4.84□□□□□ -1.63
TRANK1-201ENST00000429976 KRTAP12-1P59990 96 aa4.84□□□□□ -1.64
TRANK1-201ENST00000429976 KRTAP21-3Q3LHN1 58 aa4.82□□□□□ -1.64
TRANK1-201ENST00000429976 MXRA5Q9NR99 2828 aa4.79□□□□□ -1.64
TRANK1-201ENST00000429976 PDZD2O15018 2839 aa4.77□□□□□ -1.65
TRANK1-201ENST00000429976 VWFP04275 2813 aa4.76□□□□□ -1.65
TRANK1-201ENST00000429976 KRTAP3-1Q9BYR8 98 aa4.76□□□□□ -1.65
TRANK1-201ENST00000429976 DMXL1Q9Y485 3027 aa4.76□□□□□ -1.65
TRANK1-201ENST00000429976 CELSR1Q9NYQ6 3014 aa4.75□□□□□ -1.65
TRANK1-201ENST00000429976 WDFY3Q8IZQ1 3526 aa4.74□□□□□ -1.65
TRANK1-201ENST00000429976 MUC3AQ02505 3323 aa4.72□□□□□ -1.65
TRANK1-201ENST00000429976 ASPMQ8IZT6 3477 aa4.72□□□□□ -1.65
TRANK1-201ENST00000429976 PKD1L1Q8TDX9 2849 aa4.7□□□□□ -1.66
TRANK1-201ENST00000429976 DMDP11532 3685 aa4.7□□□□□ -1.66
TRANK1-201ENST00000429976 SRRM2Q9UQ35 2752 aaKnown RBP4.68□□□□□ -1.66
TRANK1-201ENST00000429976 NBPF19A0A087WUL8 3843 aa4.65□□□□□ -1.66
TRANK1-201ENST00000429976 LOC400499M0QZD8 3231 aa4.65□□□□□ -1.67
TRANK1-201ENST00000429976 ZFHX4Q86UP3 3567 aa4.63□□□□□ -1.67
TRANK1-201ENST00000429976 KRTAP10-6P60371 365 aaPredicted RBP4.63□□□□□ -1.67
TRANK1-201ENST00000429976 CSMD1Q96PZ7 3565 aa4.62□□□□□ -1.67
TRANK1-201ENST00000429976 INE1O15225 51 aa4.6□□□□□ -1.67
TRANK1-201ENST00000429976 LAMA5O15230 3695 aa4.58□□□□□ -1.68
TRANK1-201ENST00000429976 DCHS1Q96JQ0 3298 aa4.58□□□□□ -1.68
TRANK1-201ENST00000429976 SMG1Q96Q15 3661 aaKnown RBP4.55□□□□□ -1.68
TRANK1-201ENST00000429976 RELNP78509 3460 aa4.54□□□□□ -1.68
TRANK1-201ENST00000429976 BSNQ9UPA5 3926 aa4.46□□□□□ -1.69
TRANK1-201ENST00000429976 SPENQ96T58 3664 aaKnown RBP4.46□□□□□ -1.7
TRANK1-201ENST00000429976 FBN3Q75N90 2809 aa4.46□□□□□ -1.7
TRANK1-201ENST00000429976 KRTAP3-2Q9BYR7 98 aa4.45□□□□□ -1.7
TRANK1-201ENST00000429976 MEGF8Q7Z7M0 2845 aa4.45□□□□□ -1.7
TRANK1-201ENST00000429976 KRTAP10-12P60413 245 aa4.45□□□□□ -1.7
TRANK1-201ENST00000429976 KRTAP3-3Q9BYR6 98 aa4.44□□□□□ -1.7
TRANK1-201ENST00000429976 FBN1P35555 2871 aaKnown RBP4.43□□□□□ -1.7
TRANK1-201ENST00000429976 KRTAP10-5P60370 271 aa4.42□□□□□ -1.7
TRANK1-201ENST00000429976 ZFHX3Q15911 3703 aa4.38□□□□□ -1.71
TRANK1-201ENST00000429976 SVEP1Q4LDE5 3571 aa4.37□□□□□ -1.71
TRANK1-201ENST00000429976 COL7A1Q02388 2944 aa4.35□□□□□ -1.71
TRANK1-201ENST00000429976 TRRAPQ9Y4A5 3859 aa4.35□□□□□ -1.71
TRANK1-201ENST00000429976 VPS13CQ709C8 3753 aa4.35□□□□□ -1.71
TRANK1-201ENST00000429976 MT1HL1P0DM35 61 aa4.34□□□□□ -1.71
TRANK1-201ENST00000429976 LCE3AQ5TA76 89 aa4.34□□□□□ -1.72
TRANK1-201ENST00000429976 ANK3Q12955 4377 aaKnown RBP4.32□□□□□ -1.72
TRANK1-201ENST00000429976 KRTAP12-3P60328 96 aa4.32□□□□□ -1.72
TRANK1-201ENST00000429976 KRTAP4-5Q9BYR2 181 aa4.29□□□□□ -1.72
TRANK1-201ENST00000429976 ALMS1Q8TCU4 4167 aa4.28□□□□□ -1.72
TRANK1-201ENST00000429976 OTOGQ6ZRI0 2925 aa4.27□□□□□ -1.73
TRANK1-201ENST00000429976 LORP23490 312 aaPredicted RBP4.26□□□□□ -1.73
TRANK1-201ENST00000429976 CUBNO60494 3623 aa4.22□□□□□ -1.73
TRANK1-201ENST00000429976 CSMD2Q7Z408 3487 aa4.19□□□□□ -1.74
TRANK1-201ENST00000429976 KRTAP10-4P60372 401 aaPredicted RBP4.18□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms