RNA–Protein interactions for RNA: ENST00000428331.6

ATP2C1-204, Transcript of ATPase secretory pathway Ca2+ transporting 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene ATP2C1, Length 4,795 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2C1-204ENST00000428331 IGLV5-52A0A0A0MRZ9 124 aa6.45□□□□□ -1.38
ATP2C1-204ENST00000428331 A6NN06 94 aa6.45□□□□□ -1.38
ATP2C1-204ENST00000428331 LINC01554Q52M75 96 aa6.45□□□□□ -1.38
ATP2C1-204ENST00000428331 A0A087WTM6 91 aa6.44□□□□□ -1.38
ATP2C1-204ENST00000428331 FAM229AH3BQW9 127 aa6.44□□□□□ -1.38
ATP2C1-204ENST00000428331 LINC00313P59037 77 aa6.43□□□□□ -1.38
ATP2C1-204ENST00000428331 SSBP3-AS1Q7Z2R9 100 aa6.42□□□□□ -1.38
ATP2C1-204ENST00000428331 A0A087X002 238 aa6.41□□□□□ -1.38
ATP2C1-204ENST00000428331 NOTCH2NLQ7Z3S9 236 aa6.41□□□□□ -1.38
ATP2C1-204ENST00000428331 SRRM2Q9UQ35 2752 aaKnown RBP6.4□□□□□ -1.39
ATP2C1-204ENST00000428331 PLAC8Q9NZF1 115 aa6.38□□□□□ -1.39
ATP2C1-204ENST00000428331 FBN1P35555 2871 aaKnown RBP6.38□□□□□ -1.39
ATP2C1-204ENST00000428331 Q5W150 140 aa6.38□□□□□ -1.39
ATP2C1-204ENST00000428331 IGLV7-43P04211 117 aa6.38□□□□□ -1.39
ATP2C1-204ENST00000428331 Q6ZRN7 208 aaPredicted RBP6.37□□□□□ -1.39
ATP2C1-204ENST00000428331 UQCR11O14957 56 aa6.37□□□□□ -1.39
ATP2C1-204ENST00000428331 IGKV2D-30A0A075B6S6 120 aa6.36□□□□□ -1.39
ATP2C1-204ENST00000428331 IGKV2-30P06310 120 aa6.36□□□□□ -1.39
ATP2C1-204ENST00000428331 C1orf134Q5TEV5 83 aa6.35□□□□□ -1.39
ATP2C1-204ENST00000428331 DMAC1Q96GE9 116 aa6.34□□□□□ -1.39
ATP2C1-204ENST00000428331 MIR22HGQ0VDD5 57 aa6.34□□□□□ -1.4
ATP2C1-204ENST00000428331 SPINT4Q6UDR6 99 aa6.31□□□□□ -1.4
ATP2C1-204ENST00000428331 A0A0A0MQY5 61 aa6.28□□□□□ -1.4
ATP2C1-204ENST00000428331 SPINK1P00995 79 aa6.28□□□□□ -1.4
ATP2C1-204ENST00000428331 LY6G6CO95867 125 aa6.27□□□□□ -1.41
ATP2C1-204ENST00000428331 TENM2Q9NT68 2774 aa6.25□□□□□ -1.41
ATP2C1-204ENST00000428331 CSAG1Q6PB30 78 aa6.25□□□□□ -1.41
ATP2C1-204ENST00000428331 SPATA8Q6RVD6 105 aa6.25□□□□□ -1.41
ATP2C1-204ENST00000428331 ADM2Q7Z4H4 148 aa6.24□□□□□ -1.41
ATP2C1-204ENST00000428331 KRTAP13-3Q3SY46 172 aa6.23□□□□□ -1.41
ATP2C1-204ENST00000428331 PLA2G1BP04054 148 aaKnown RBP6.22□□□□□ -1.41
ATP2C1-204ENST00000428331 K7ERS5 55 aa6.19□□□□□ -1.42
ATP2C1-204ENST00000428331 TYMSOSQ8TAI1 123 aa6.17□□□□□ -1.42
ATP2C1-204ENST00000428331 COL7A1Q02388 2944 aa6.15□□□□□ -1.42
ATP2C1-204ENST00000428331 Q8N1X5 172 aa6.14□□□□□ -1.43
ATP2C1-204ENST00000428331 CRIPTQ9P021 101 aa6.13□□□□□ -1.43
ATP2C1-204ENST00000428331 HUWE1Q7Z6Z7 4374 aaKnown RBP6.12□□□□□ -1.43
ATP2C1-204ENST00000428331 KRTAP13-2Q52LG2 175 aa6.11□□□□□ -1.43
ATP2C1-204ENST00000428331 DNAH10Q8IVF4 4471 aa6.08□□□□□ -1.44
ATP2C1-204ENST00000428331 KRTAP10-2P60368 255 aa6.07□□□□□ -1.44
ATP2C1-204ENST00000428331 TGP01266 2768 aa6.07□□□□□ -1.44
ATP2C1-204ENST00000428331 FLG2Q5D862 2391 aaPredicted RBP6.06□□□□□ -1.44
ATP2C1-204ENST00000428331 KRTAP16-1A8MUX0 517 aa6.06□□□□□ -1.44
ATP2C1-204ENST00000428331 CSMD3Q7Z407 3707 aa6.06□□□□□ -1.44
ATP2C1-204ENST00000428331 LINC00304Q8N9R0 145 aa6.06□□□□□ -1.44
ATP2C1-204ENST00000428331 ANK2Q01484 3957 aa6.05□□□□□ -1.44
ATP2C1-204ENST00000428331 DNAH1Q9P2D7 4330 aa6.03□□□□□ -1.44
ATP2C1-204ENST00000428331 A0A1B0GU33 70 aa6.03□□□□□ -1.44
ATP2C1-204ENST00000428331 KRTAP10-1P60331 282 aa6.02□□□□□ -1.45
ATP2C1-204ENST00000428331 DMBT1Q9UGM3 2413 aaPredicted RBP5.99□□□□□ -1.45
ATP2C1-204ENST00000428331 C9orf92A6NGG3 77 aa5.98□□□□□ -1.45
ATP2C1-204ENST00000428331 KRTAP1-4P0C5Y4 121 aa5.97□□□□□ -1.45
ATP2C1-204ENST00000428331 FBN3Q75N90 2809 aa5.97□□□□□ -1.45
ATP2C1-204ENST00000428331 MEGF8Q7Z7M0 2845 aa5.96□□□□□ -1.46
ATP2C1-204ENST00000428331 DNAH9Q9NYC9 4486 aa5.95□□□□□ -1.46
ATP2C1-204ENST00000428331 Q6ZSA8 131 aa5.95□□□□□ -1.46
ATP2C1-204ENST00000428331 DNAH3Q8TD57 4116 aa5.94□□□□□ -1.46
ATP2C1-204ENST00000428331 NDUFAF8A1L188 74 aa5.93□□□□□ -1.46
ATP2C1-204ENST00000428331 H1FX-AS1Q4G0G2 97 aa5.93□□□□□ -1.46
ATP2C1-204ENST00000428331 RPS29P62273 56 aaKnown RBP5.92□□□□□ -1.46
ATP2C1-204ENST00000428331 LUZP6Q538Z0 58 aa5.91□□□□□ -1.46
ATP2C1-204ENST00000428331 CMYA5Q8N3K9 4069 aa5.89□□□□□ -1.47
ATP2C1-204ENST00000428331 KRTAP25-1Q3LHN0 102 aa5.89□□□□□ -1.47
ATP2C1-204ENST00000428331 PLECQ15149 4684 aaKnown RBP5.89□□□□□ -1.47
ATP2C1-204ENST00000428331 H0YAA0 97 aa5.89□□□□□ -1.47
ATP2C1-204ENST00000428331 A8MUU9 505 aa5.88□□□□□ -1.47
ATP2C1-204ENST00000428331 ROMO1P60602 79 aa5.87□□□□□ -1.47
ATP2C1-204ENST00000428331 SMR3BP02814 79 aaPredicted RBP5.87□□□□□ -1.47
ATP2C1-204ENST00000428331 C20orf166-AS1Q96NR2 134 aa5.84□□□□□ -1.47
ATP2C1-204ENST00000428331 LYSTQ99698 3801 aa5.84□□□□□ -1.47
ATP2C1-204ENST00000428331 DNAH8Q96JB1 4490 aa5.84□□□□□ -1.47
ATP2C1-204ENST00000428331 COX6B2Q6YFQ2 88 aa5.83□□□□□ -1.48
ATP2C1-204ENST00000428331 ALMS1Q8TCU4 4167 aa5.8□□□□□ -1.48
ATP2C1-204ENST00000428331 VPS13DQ5THJ4 4388 aa5.79□□□□□ -1.48
ATP2C1-204ENST00000428331 DNAH17Q9UFH2 4485 aa5.77□□□□□ -1.49
ATP2C1-204ENST00000428331 RPL37P61927 97 aaKnown RBP5.77□□□□□ -1.49
ATP2C1-204ENST00000428331 A0A0D9SG42 100 aa5.76□□□□□ -1.49
ATP2C1-204ENST00000428331 DYNC2H1Q8NCM8 4307 aaKnown RBP5.74□□□□□ -1.49
ATP2C1-204ENST00000428331 KRTAP3-1Q9BYR8 98 aa5.73□□□□□ -1.49
ATP2C1-204ENST00000428331 DNAH7Q8WXX0 4024 aa5.73□□□□□ -1.49
ATP2C1-204ENST00000428331 STARD9Q9P2P6 4700 aa5.71□□□□□ -1.49
ATP2C1-204ENST00000428331 FRAS1Q86XX4 4008 aa5.71□□□□□ -1.5
ATP2C1-204ENST00000428331 HECTD4Q9Y4D8 3996 aa5.68□□□□□ -1.5
ATP2C1-204ENST00000428331 S4R3F8 94 aa5.66□□□□□ -1.5
ATP2C1-204ENST00000428331 DNAH11Q96DT5 4516 aa5.66□□□□□ -1.5
ATP2C1-204ENST00000428331 DNAH2Q9P225 4427 aa5.65□□□□□ -1.51
ATP2C1-204ENST00000428331 KMT2AQ03164 3969 aa5.63□□□□□ -1.51
ATP2C1-204ENST00000428331 LRP1BQ9NZR2 4599 aa5.6□□□□□ -1.51
ATP2C1-204ENST00000428331 PRKDCP78527 4128 aaKnown RBP5.55□□□□□ -1.52
ATP2C1-204ENST00000428331 KRTAP10-6P60371 365 aaPredicted RBP5.52□□□□□ -1.53
ATP2C1-204ENST00000428331 DNAH5Q8TE73 4624 aa5.52□□□□□ -1.53
ATP2C1-204ENST00000428331 DNAH6Q9C0G6 4158 aa5.51□□□□□ -1.53
ATP2C1-204ENST00000428331 SEC61BP60468 96 aaKnown RBP5.51□□□□□ -1.53
ATP2C1-204ENST00000428331 C10orf95Q9H7T3 257 aa5.49□□□□□ -1.53
ATP2C1-204ENST00000428331 P0C880 135 aa5.48□□□□□ -1.53
ATP2C1-204ENST00000428331 KRTAP13-4Q3LI77 160 aa5.48□□□□□ -1.53
ATP2C1-204ENST00000428331 TPRXLQ17RH7 258 aa5.47□□□□□ -1.53
ATP2C1-204ENST00000428331 VPS13BQ7Z7G8 4022 aa5.46□□□□□ -1.53
ATP2C1-204ENST00000428331 XP32Q5T750 250 aa5.46□□□□□ -1.54
ATP2C1-204ENST00000428331 KRTAP3-3Q9BYR6 98 aa5.46□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 562.9 ms