RNA–Protein interactions for RNA: ENST00000427191.6

PTPN13-203, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN13, Length 8,487 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-203ENST00000427191 MAP1AP78559 2803 aaPredicted RBP8.09□□□□□ -1.11
PTPN13-203ENST00000427191 ASPMQ8IZT6 3477 aa8.08□□□□□ -1.12
PTPN13-203ENST00000427191 Q6ZRN7 208 aaPredicted RBP8.08□□□□□ -1.12
PTPN13-203ENST00000427191 DSPP15924 2871 aaKnown RBP8.06□□□□□ -1.12
PTPN13-203ENST00000427191 DCHS1Q96JQ0 3298 aa8.06□□□□□ -1.12
PTPN13-203ENST00000427191 CFAP47Q6ZTR5 3102 aa8.04□□□□□ -1.12
PTPN13-203ENST00000427191 CHD9Q3L8U1 2897 aa8.04□□□□□ -1.12
PTPN13-203ENST00000427191 KRTAP13-1Q8IUC0 172 aa8.03□□□□□ -1.12
PTPN13-203ENST00000427191 FRYLO94915 3013 aa8.02□□□□□ -1.13
PTPN13-203ENST00000427191 KRTAP13-2Q52LG2 175 aa7.94□□□□□ -1.14
PTPN13-203ENST00000427191 LAMA5O15230 3695 aa7.94□□□□□ -1.14
PTPN13-203ENST00000427191 KRTAP21-3Q3LHN1 58 aa7.93□□□□□ -1.14
PTPN13-203ENST00000427191 UBR5O95071 2799 aaPredicted RBP7.92□□□□□ -1.14
PTPN13-203ENST00000427191 ASH1LQ9NR48 2969 aaKnown RBP7.92□□□□□ -1.14
PTPN13-203ENST00000427191 BOD1L1Q8NFC6 3051 aa7.92□□□□□ -1.14
PTPN13-203ENST00000427191 ITPR1Q14643 2758 aa7.91□□□□□ -1.14
PTPN13-203ENST00000427191 EYSQ5T1H1 3165 aa7.9□□□□□ -1.15
PTPN13-203ENST00000427191 UTP20O75691 2785 aaKnown RBP7.87□□□□□ -1.15
PTPN13-203ENST00000427191 P0C880 135 aa7.84□□□□□ -1.15
PTPN13-203ENST00000427191 ZZEF1O43149 2961 aa7.83□□□□□ -1.16
PTPN13-203ENST00000427191 PRO2289Q9P1D8 64 aa7.83□□□□□ -1.16
PTPN13-203ENST00000427191 CSMD1Q96PZ7 3565 aa7.83□□□□□ -1.16
PTPN13-203ENST00000427191 KRTAP7-1Q8IUC3 87 aa7.82□□□□□ -1.16
PTPN13-203ENST00000427191 NBEAQ8NFP9 2946 aa7.79□□□□□ -1.16
PTPN13-203ENST00000427191 TACC2O95359 2948 aa7.78□□□□□ -1.16
PTPN13-203ENST00000427191 LOC400499M0QZD8 3231 aa7.76□□□□□ -1.17
PTPN13-203ENST00000427191 ADGRG4Q8IZF6 3080 aa7.76□□□□□ -1.17
PTPN13-203ENST00000427191 KRTAP10-8P60410 259 aa7.75□□□□□ -1.17
PTPN13-203ENST00000427191 ZFHX4Q86UP3 3567 aa7.74□□□□□ -1.17
PTPN13-203ENST00000427191 ATMQ13315 3056 aa7.71□□□□□ -1.17
PTPN13-203ENST00000427191 H0YAA0 97 aa7.71□□□□□ -1.18
PTPN13-203ENST00000427191 DMDP11532 3685 aa7.7□□□□□ -1.18
PTPN13-203ENST00000427191 CRYBG3Q68DQ2 2970 aa7.7□□□□□ -1.18
PTPN13-203ENST00000427191 RELNP78509 3460 aa7.67□□□□□ -1.18
PTPN13-203ENST00000427191 COL12A1Q99715 3063 aa7.67□□□□□ -1.18
PTPN13-203ENST00000427191 TPRXLQ17RH7 258 aa7.66□□□□□ -1.18
PTPN13-203ENST00000427191 SPENQ96T58 3664 aaKnown RBP7.65□□□□□ -1.18
PTPN13-203ENST00000427191 XP32Q5T750 250 aa7.65□□□□□ -1.18
PTPN13-203ENST00000427191 DMXL2Q8TDJ6 3036 aa7.65□□□□□ -1.18
PTPN13-203ENST00000427191 NBPF19A0A087WUL8 3843 aa7.65□□□□□ -1.19
PTPN13-203ENST00000427191 DMXL1Q9Y485 3027 aa7.63□□□□□ -1.19
PTPN13-203ENST00000427191 NIPBLQ6KC79 2804 aaeCLIP7.62□□□□□ -1.19
PTPN13-203ENST00000427191 HIVEP1P15822 2718 aa7.59□□□□□ -1.19
PTPN13-203ENST00000427191 TNRC18O15417 2968 aaPredicted RBP7.56□□□□□ -1.2
PTPN13-203ENST00000427191 SMG1Q96Q15 3661 aaKnown RBP7.54□□□□□ -1.2
PTPN13-203ENST00000427191 TENM3Q9P273 2699 aa7.53□□□□□ -1.2
PTPN13-203ENST00000427191 KRTAP1-4P0C5Y4 121 aa7.5□□□□□ -1.21
PTPN13-203ENST00000427191 TENM1Q9UKZ4 2725 aa7.5□□□□□ -1.21
PTPN13-203ENST00000427191 FLNCQ14315 2725 aa7.49□□□□□ -1.21
PTPN13-203ENST00000427191 TGP01266 2768 aa7.46□□□□□ -1.22
PTPN13-203ENST00000427191 KRTAP10-10P60014 251 aa7.44□□□□□ -1.22
PTPN13-203ENST00000427191 A0A1B0GVY2 172 aa7.4□□□□□ -1.22
PTPN13-203ENST00000427191 NF1P21359 2839 aa7.38□□□□□ -1.23
PTPN13-203ENST00000427191 ZFHX3Q15911 3703 aa7.38□□□□□ -1.23
PTPN13-203ENST00000427191 SVEP1Q4LDE5 3571 aa7.37□□□□□ -1.23
PTPN13-203ENST00000427191 KRTAP13-3Q3SY46 172 aa7.35□□□□□ -1.23
PTPN13-203ENST00000427191 CELSR2Q9HCU4 2923 aa7.35□□□□□ -1.23
PTPN13-203ENST00000427191 KRTAP13-4Q3LI77 160 aa7.33□□□□□ -1.24
PTPN13-203ENST00000427191 TENM4Q6N022 2769 aa7.31□□□□□ -1.24
PTPN13-203ENST00000427191 HRNRQ86YZ3 2850 aaPredicted RBP7.24□□□□□ -1.25
PTPN13-203ENST00000427191 CELSR1Q9NYQ6 3014 aa7.24□□□□□ -1.25
PTPN13-203ENST00000427191 VPS13CQ709C8 3753 aa7.22□□□□□ -1.25
PTPN13-203ENST00000427191 DCHS2Q6V1P9 2916 aa7.2□□□□□ -1.26
PTPN13-203ENST00000427191 KRTAP12-2P59991 146 aa7.16□□□□□ -1.26
PTPN13-203ENST00000427191 FBN2P35556 2912 aa7.16□□□□□ -1.26
PTPN13-203ENST00000427191 CUBNO60494 3623 aa7.15□□□□□ -1.27
PTPN13-203ENST00000427191 BSNQ9UPA5 3926 aa7.14□□□□□ -1.27
PTPN13-203ENST00000427191 INE1O15225 51 aa7.14□□□□□ -1.27
PTPN13-203ENST00000427191 PDZD2O15018 2839 aa7.12□□□□□ -1.27
PTPN13-203ENST00000427191 KRTAP12-1P59990 96 aa7.06□□□□□ -1.28
PTPN13-203ENST00000427191 AKAP9Q99996 3911 aa7.04□□□□□ -1.28
PTPN13-203ENST00000427191 ZANQ9Y493 2812 aa7.03□□□□□ -1.28
PTPN13-203ENST00000427191 KRTAP15-1Q3LI76 137 aa7□□□□□ -1.29
PTPN13-203ENST00000427191 MUC3AQ02505 3323 aa6.99□□□□□ -1.29
PTPN13-203ENST00000427191 MXRA5Q9NR99 2828 aa6.98□□□□□ -1.29
PTPN13-203ENST00000427191 CSMD2Q7Z408 3487 aa6.95□□□□□ -1.3
PTPN13-203ENST00000427191 TENM2Q9NT68 2774 aa6.9□□□□□ -1.31
PTPN13-203ENST00000427191 VWFP04275 2813 aa6.83□□□□□ -1.32
PTPN13-203ENST00000427191 PKD1L1Q8TDX9 2849 aa6.81□□□□□ -1.32
PTPN13-203ENST00000427191 CSMD3Q7Z407 3707 aa6.81□□□□□ -1.32
PTPN13-203ENST00000427191 TRRAPQ9Y4A5 3859 aa6.78□□□□□ -1.32
PTPN13-203ENST00000427191 KRTAP23-1A1A580 65 aa6.71□□□□□ -1.34
PTPN13-203ENST00000427191 KRTAP3-1Q9BYR8 98 aa6.7□□□□□ -1.34
PTPN13-203ENST00000427191 SRRM2Q9UQ35 2752 aaKnown RBP6.68□□□□□ -1.34
PTPN13-203ENST00000427191 KRTAP10-6P60371 365 aaPredicted RBP6.67□□□□□ -1.34
PTPN13-203ENST00000427191 KRTAP10-12P60413 245 aa6.62□□□□□ -1.35
PTPN13-203ENST00000427191 MEGF8Q7Z7M0 2845 aa6.55□□□□□ -1.36
PTPN13-203ENST00000427191 COL7A1Q02388 2944 aa6.54□□□□□ -1.36
PTPN13-203ENST00000427191 ANK3Q12955 4377 aaKnown RBP6.51□□□□□ -1.37
PTPN13-203ENST00000427191 ZNF469Q96JG9 3925 aaPredicted RBP6.51□□□□□ -1.37
PTPN13-203ENST00000427191 KRTAP12-3P60328 96 aa6.41□□□□□ -1.38
PTPN13-203ENST00000427191 FBN3Q75N90 2809 aa6.4□□□□□ -1.39
PTPN13-203ENST00000427191 ALMS1Q8TCU4 4167 aa6.37□□□□□ -1.39
PTPN13-203ENST00000427191 FBN1P35555 2871 aaKnown RBP6.37□□□□□ -1.39
PTPN13-203ENST00000427191 HUWE1Q7Z6Z7 4374 aaKnown RBP6.37□□□□□ -1.39
PTPN13-203ENST00000427191 FRAS1Q86XX4 4008 aa6.36□□□□□ -1.39
PTPN13-203ENST00000427191 KRTAP3-2Q9BYR7 98 aa6.35□□□□□ -1.39
PTPN13-203ENST00000427191 CRCT1Q9UGL9 99 aa6.31□□□□□ -1.4
PTPN13-203ENST00000427191 KRTAP3-3Q9BYR6 98 aa6.29□□□□□ -1.4
PTPN13-203ENST00000427191 OTOGQ6ZRI0 2925 aa6.27□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 541.2 ms