RNA–Protein interactions for RNA: ENST00000427191.6

PTPN13-203, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN13, Length 8,487 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-203ENST00000427191 DCAF8L2P0C7V8 631 aa23.85■■□□□ 1.41
PTPN13-203ENST00000427191 PELP1Q8IZL8 1130 aaKnown RBP23.77■■□□□ 1.39
PTPN13-203ENST00000427191 CCER1Q8TC90 406 aaPredicted RBP22.61■■□□□ 1.21
PTPN13-203ENST00000427191 MYT1Q01538 1121 aa22.54■■□□□ 1.2
PTPN13-203ENST00000427191 SUPT5HO00267 1087 aaKnown RBP22.52■■□□□ 1.2
PTPN13-203ENST00000427191 APLP2Q06481 763 aa22.48■■□□□ 1.19
PTPN13-203ENST00000427191 ERICH6Q7L0X2 663 aa22.41■■□□□ 1.18
PTPN13-203ENST00000427191 FAM9AQ8IZU1 332 aaPredicted RBP22.39■■□□□ 1.17
PTPN13-203ENST00000427191 CENPBP07199 599 aaPredicted RBP22.25■■□□□ 1.15
PTPN13-203ENST00000427191 ZEB1P37275 1124 aaPredicted RBP22.09■■□□□ 1.13
PTPN13-203ENST00000427191 NISCHQ9Y2I1 1504 aa22.05■■□□□ 1.12
PTPN13-203ENST00000427191 EHMT2Q96KQ7 1210 aa22.02■■□□□ 1.12
PTPN13-203ENST00000427191 NEFLP07196 543 aa21.83■■□□□ 1.09
PTPN13-203ENST00000427191 SHROOM4Q9ULL8 1493 aa21.78■■□□□ 1.08
PTPN13-203ENST00000427191 YTHDC1Q96MU7 727 aaKnown RBP21.72■■□□□ 1.07
PTPN13-203ENST00000427191 PCGF6Q9BYE7 350 aa21.51■■□□□ 1.03
PTPN13-203ENST00000427191 DAXXQ9UER7 740 aaPredicted RBP21.44■■□□□ 1.02
PTPN13-203ENST00000427191 TTBK1Q5TCY1 1321 aaPredicted RBP21.33■■□□□ 1.01
PTPN13-203ENST00000427191 TRIM41Q8WV44 630 aa21.13■□□□□ 0.97
PTPN13-203ENST00000427191 ATP1B4Q9UN42 357 aaPredicted RBP21.04■□□□□ 0.96
PTPN13-203ENST00000427191 UBTFP17480 764 aaKnown RBP21■□□□□ 0.95
PTPN13-203ENST00000427191 RTL5Q5HYW3 569 aaPredicted RBP20.93■□□□□ 0.94
PTPN13-203ENST00000427191 RANGAP1P46060 587 aaPredicted RBP20.86■□□□□ 0.93
PTPN13-203ENST00000427191 ZNF316A6NFI3 1004 aaPredicted RBP20.85■□□□□ 0.93
PTPN13-203ENST00000427191 TRIM26Q12899 539 aaPredicted RBP20.8■□□□□ 0.92
PTPN13-203ENST00000427191 CLSPNQ9HAW4 1339 aa20.57■□□□□ 0.88
PTPN13-203ENST00000427191 HRCP23327 699 aa20.53■□□□□ 0.88
PTPN13-203ENST00000427191 MYT1LQ9UL68 1186 aa20.48■□□□□ 0.87
PTPN13-203ENST00000427191 POLR3GLQ9BT43 218 aa20.44■□□□□ 0.86
PTPN13-203ENST00000427191 PPARGC1BQ86YN6 1023 aaKnown RBP20.37■□□□□ 0.85
PTPN13-203ENST00000427191 ZBTB47Q9UFB7 747 aaPredicted RBP20.34■□□□□ 0.85
PTPN13-203ENST00000427191 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.29■□□□□ 0.84
PTPN13-203ENST00000427191 HNRNPUL2Q1KMD3 747 aaKnown RBP20.29■□□□□ 0.84
PTPN13-203ENST00000427191 CDK11AQ9UQ88 783 aaPredicted RBP20.23■□□□□ 0.83
PTPN13-203ENST00000427191 SLC4A1APQ9BWU0 796 aaKnown RBP20.23■□□□□ 0.83
PTPN13-203ENST00000427191 DIEXFQ68CQ4 756 aaKnown RBP20.22■□□□□ 0.83
PTPN13-203ENST00000427191 ITGAEP38570 1179 aa20.2■□□□□ 0.82
PTPN13-203ENST00000427191 GLIPR1L2Q4G1C9 344 aa20.12■□□□□ 0.81
PTPN13-203ENST00000427191 ANP32BQ92688 251 aaKnown RBP20.11■□□□□ 0.81
PTPN13-203ENST00000427191 ANP32CO43423 234 aa20.05■□□□□ 0.8
PTPN13-203ENST00000427191 ANP32AP39687 249 aaKnown RBP20.04■□□□□ 0.8
PTPN13-203ENST00000427191 CHIC1Q5VXU3 224 aa20.03■□□□□ 0.8
PTPN13-203ENST00000427191 NEFMP07197 916 aa20.01■□□□□ 0.79
PTPN13-203ENST00000427191 CNGB1Q14028 1251 aaPredicted RBP19.98■□□□□ 0.79
PTPN13-203ENST00000427191 CANXP27824 592 aaKnown RBP19.96■□□□□ 0.79
PTPN13-203ENST00000427191 FAM50AQ14320 339 aaKnown RBP19.83■□□□□ 0.76
PTPN13-203ENST00000427191 TRIM52Q96A61 297 aa19.82■□□□□ 0.76
PTPN13-203ENST00000427191 UPF2Q9HAU5 1272 aaKnown RBP19.8■□□□□ 0.76
PTPN13-203ENST00000427191 GTF3C3Q9Y5Q9 886 aa19.78■□□□□ 0.76
PTPN13-203ENST00000427191 HSP90AA1P07900 732 aaKnown RBP19.73■□□□□ 0.75
PTPN13-203ENST00000427191 BCANQ96GW7 911 aa19.66■□□□□ 0.74
PTPN13-203ENST00000427191 LOC105371045A0A1W2PR82 267 aa19.66■□□□□ 0.74
PTPN13-203ENST00000427191 NEUROD1Q13562 356 aa19.64■□□□□ 0.73
PTPN13-203ENST00000427191 EIF5BO60841 1220 aaKnown RBP19.63■□□□□ 0.73
PTPN13-203ENST00000427191 SLC24A1O60721 1099 aa19.6■□□□□ 0.73
PTPN13-203ENST00000427191 ZNF326Q5BKZ1 582 aaKnown RBP19.55■□□□□ 0.72
PTPN13-203ENST00000427191 ACIN1Q9UKV3 1341 aaKnown RBP19.51■□□□□ 0.71
PTPN13-203ENST00000427191 ANP32EQ9BTT0 268 aa19.5■□□□□ 0.71
PTPN13-203ENST00000427191 CDK11BP21127 795 aaKnown RBP19.49■□□□□ 0.71
PTPN13-203ENST00000427191 GOLGA6L2Q8N9W4 650 aaPredicted RBP19.47■□□□□ 0.71
PTPN13-203ENST00000427191 ABCC9O60706 1549 aa19.46■□□□□ 0.71
PTPN13-203ENST00000427191 FBLN2P98095 1184 aa19.46■□□□□ 0.71
PTPN13-203ENST00000427191 PABPN1Q86U42 306 aaKnown RBP eCLIP19.44■□□□□ 0.7
PTPN13-203ENST00000427191 NPM2Q86SE8 214 aaKnown RBP19.43■□□□□ 0.7
PTPN13-203ENST00000427191 TNNT2P45379 298 aaPredicted RBP19.41■□□□□ 0.7
PTPN13-203ENST00000427191 BCL11AQ9H165 835 aa19.35■□□□□ 0.69
PTPN13-203ENST00000427191 TONSLQ96HA7 1378 aa19.32■□□□□ 0.68
PTPN13-203ENST00000427191 DDRGK1Q96HY6 314 aa19.29■□□□□ 0.68
PTPN13-203ENST00000427191 MYH16Q9H6N6 1097 aa19.28■□□□□ 0.68
PTPN13-203ENST00000427191 BECN1Q14457 450 aa19.28■□□□□ 0.68
PTPN13-203ENST00000427191 GOLGA6L22H0YM25 854 aa19.24■□□□□ 0.67
PTPN13-203ENST00000427191 TRIM44Q96DX7 344 aaPredicted RBP19.24■□□□□ 0.67
PTPN13-203ENST00000427191 FKBP8Q14318 412 aa19.24■□□□□ 0.67
PTPN13-203ENST00000427191 NCLP19338 710 aaKnown RBP19.23■□□□□ 0.67
PTPN13-203ENST00000427191 CCDC136Q96JN2 1154 aa19.23■□□□□ 0.67
PTPN13-203ENST00000427191 ESF1Q9H501 851 aaKnown RBP19.23■□□□□ 0.67
PTPN13-203ENST00000427191 HNRNPUQ00839 825 aaKnown RBP eCLIP19.17■□□□□ 0.66
PTPN13-203ENST00000427191 WDR43Q15061 677 aaKnown RBP eCLIP19.13■□□□□ 0.65
PTPN13-203ENST00000427191 TMC1Q8TDI8 760 aa19.11■□□□□ 0.65
PTPN13-203ENST00000427191 ZRSR1Q15695 479 aaKnown RBP19.11■□□□□ 0.65
PTPN13-203ENST00000427191 DCAF1Q9Y4B6 1507 aa19.08■□□□□ 0.64
PTPN13-203ENST00000427191 STAG3Q9UJ98 1225 aa19.07■□□□□ 0.64
PTPN13-203ENST00000427191 NBR1Q14596 966 aa19.07■□□□□ 0.64
PTPN13-203ENST00000427191 PLPPR3Q6T4P5 718 aa19.07■□□□□ 0.64
PTPN13-203ENST00000427191 ERICH6BQ5W0A0 696 aa19.06■□□□□ 0.64
PTPN13-203ENST00000427191 CASC1Q6TDU7 716 aa19.05■□□□□ 0.64
PTPN13-203ENST00000427191 GOLGA6L6A8MZA4 724 aa19.03■□□□□ 0.64
PTPN13-203ENST00000427191 FAM9BQ8IZU0 186 aa18.99■□□□□ 0.63
PTPN13-203ENST00000427191 NPM1P06748 294 aaKnown RBP eCLIP18.98■□□□□ 0.63
PTPN13-203ENST00000427191 NRDCO43847 1150 aa18.97■□□□□ 0.63
PTPN13-203ENST00000427191 PTMAP06454 111 aaKnown RBP18.96■□□□□ 0.63
PTPN13-203ENST00000427191 ZNF777Q9ULD5 760 aaPredicted RBP18.96■□□□□ 0.63
PTPN13-203ENST00000427191 CSRNP3Q8WYN3 585 aa18.95■□□□□ 0.62
PTPN13-203ENST00000427191 PPM1GO15355 546 aaPredicted RBP18.95■□□□□ 0.62
PTPN13-203ENST00000427191 CHMP4BQ9H444 224 aaKnown RBP18.91■□□□□ 0.62
PTPN13-203ENST00000427191 ARXQ96QS3 562 aa18.9■□□□□ 0.62
PTPN13-203ENST00000427191 DNTTIP2Q5QJE6 756 aaKnown RBP18.9■□□□□ 0.62
PTPN13-203ENST00000427191 MRS2Q9HD23 443 aa18.9■□□□□ 0.62
PTPN13-203ENST00000427191 ARID3CA6NKF2 412 aa18.87■□□□□ 0.61
PTPN13-203ENST00000427191 L1TD1Q5T7N2 865 aaKnown RBP18.86■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 81.9 ms