RNA–Protein interactions for RNA: ENST00000423368.6

CNOT4-205, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CNOT4, Length 3,297 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-205ENST00000423368 CASC10Q5T4H9 136 aa4.12□□□□□ -1.75
CNOT4-205ENST00000423368 C8orf17Q9NRJ1 99 aa4.12□□□□□ -1.75
CNOT4-205ENST00000423368 PRR34Q9NV39 138 aa4.12□□□□□ -1.75
CNOT4-205ENST00000423368 KRTAP4-16G5E9R7 235 aaPredicted RBP4.11□□□□□ -1.75
CNOT4-205ENST00000423368 MEGF8Q7Z7M0 2845 aa4.11□□□□□ -1.75
CNOT4-205ENST00000423368 DEFB131BA0A096LNP1 70 aa4.11□□□□□ -1.75
CNOT4-205ENST00000423368 KRTAP7-1Q8IUC3 87 aa4.1□□□□□ -1.75
CNOT4-205ENST00000423368 LINC00304Q8N9R0 145 aa4.1□□□□□ -1.75
CNOT4-205ENST00000423368 ASB16-AS1Q495Z4 193 aa4.1□□□□□ -1.75
CNOT4-205ENST00000423368 C20orf166-AS1Q96NR2 134 aa4.1□□□□□ -1.75
CNOT4-205ENST00000423368 TP53AIP1Q9HCN2 124 aa4.09□□□□□ -1.75
CNOT4-205ENST00000423368 ANAPC11Q9NYG5 84 aa4.08□□□□□ -1.76
CNOT4-205ENST00000423368 MGAM2Q2M2H8 2515 aa4.08□□□□□ -1.76
CNOT4-205ENST00000423368 KRTAP26-1Q6PEX3 210 aa4.07□□□□□ -1.76
CNOT4-205ENST00000423368 MRPL34Q9BQ48 92 aaKnown RBP4.07□□□□□ -1.76
CNOT4-205ENST00000423368 IGKV2D-30A0A075B6S6 120 aa4.07□□□□□ -1.76
CNOT4-205ENST00000423368 IGKV2-30P06310 120 aa4.07□□□□□ -1.76
CNOT4-205ENST00000423368 DMAC1Q96GE9 116 aa4.06□□□□□ -1.76
CNOT4-205ENST00000423368 CHTF8P0CG12 524 aa4.05□□□□□ -1.76
CNOT4-205ENST00000423368 TENM4Q6N022 2769 aa4.05□□□□□ -1.76
CNOT4-205ENST00000423368 LUZP6Q538Z0 58 aa4.05□□□□□ -1.76
CNOT4-205ENST00000423368 SPRR1AP35321 89 aa4.04□□□□□ -1.76
CNOT4-205ENST00000423368 C10orf95Q9H7T3 257 aa4.04□□□□□ -1.76
CNOT4-205ENST00000423368 IGLV7-43P04211 117 aa4.04□□□□□ -1.76
CNOT4-205ENST00000423368 A0A1B0GVX0 72 aa4.03□□□□□ -1.77
CNOT4-205ENST00000423368 SPART-AS1P0CW21 52 aa4.03□□□□□ -1.77
CNOT4-205ENST00000423368 KRTAP11-1Q8IUC1 163 aa4.03□□□□□ -1.77
CNOT4-205ENST00000423368 Q8N1X5 172 aa4.03□□□□□ -1.77
CNOT4-205ENST00000423368 KRTAP3-1Q9BYR8 98 aa4.03□□□□□ -1.77
CNOT4-205ENST00000423368 PSORS1C2Q9UIG4 136 aa4.02□□□□□ -1.77
CNOT4-205ENST00000423368 LYSTQ99698 3801 aa4.02□□□□□ -1.77
CNOT4-205ENST00000423368 H0YAA0 97 aa4.01□□□□□ -1.77
CNOT4-205ENST00000423368 TLX1NBP0CAT3 122 aa4□□□□□ -1.77
CNOT4-205ENST00000423368 Q96NJ1 140 aa3.99□□□□□ -1.77
CNOT4-205ENST00000423368 A0A087WTM6 91 aa3.98□□□□□ -1.77
CNOT4-205ENST00000423368 Q6ZSA8 131 aa3.98□□□□□ -1.77
CNOT4-205ENST00000423368 KMT2BQ9UMN6 2715 aaPredicted RBP3.98□□□□□ -1.77
CNOT4-205ENST00000423368 IGSF10Q6WRI0 2623 aa3.96□□□□□ -1.77
CNOT4-205ENST00000423368 C14orf177Q52M58 125 aa3.96□□□□□ -1.77
CNOT4-205ENST00000423368 A0A0D9SG42 100 aa3.96□□□□□ -1.78
CNOT4-205ENST00000423368 TYMSOSQ8TAI1 123 aa3.96□□□□□ -1.78
CNOT4-205ENST00000423368 NUPR2A6NF83 97 aa3.94□□□□□ -1.78
CNOT4-205ENST00000423368 ALMS1Q8TCU4 4167 aa3.94□□□□□ -1.78
CNOT4-205ENST00000423368 K7ERS5 55 aa3.94□□□□□ -1.78
CNOT4-205ENST00000423368 CIRBP-AS1Q8TBR5 109 aa3.94□□□□□ -1.78
CNOT4-205ENST00000423368 A0A1B0GU33 70 aa3.93□□□□□ -1.78
CNOT4-205ENST00000423368 DNAH10Q8IVF4 4471 aa3.93□□□□□ -1.78
CNOT4-205ENST00000423368 TPRXLQ17RH7 258 aa3.92□□□□□ -1.78
CNOT4-205ENST00000423368 PANO1I0J062 215 aa3.91□□□□□ -1.78
CNOT4-205ENST00000423368 KRTAP10-9P60411 292 aa3.9□□□□□ -1.78
CNOT4-205ENST00000423368 FBN3Q75N90 2809 aa3.89□□□□□ -1.79
CNOT4-205ENST00000423368 LOC100996750A0A140TA64 210 aa3.89□□□□□ -1.79
CNOT4-205ENST00000423368 KRTAP4-6Q9BYQ5 205 aa3.89□□□□□ -1.79
CNOT4-205ENST00000423368 LY6G6CO95867 125 aa3.89□□□□□ -1.79
CNOT4-205ENST00000423368 KRTAP15-1Q3LI76 137 aa3.88□□□□□ -1.79
CNOT4-205ENST00000423368 LINC01556Q5JQF7 62 aa3.88□□□□□ -1.79
CNOT4-205ENST00000423368 KRTAP13-3Q3SY46 172 aa3.87□□□□□ -1.79
CNOT4-205ENST00000423368 NBDYA0A0U1RRE5 68 aa3.86□□□□□ -1.79
CNOT4-205ENST00000423368 APLNQ9ULZ1 77 aa3.86□□□□□ -1.79
CNOT4-205ENST00000423368 FRAS1Q86XX4 4008 aa3.85□□□□□ -1.79
CNOT4-205ENST00000423368 ANK2Q01484 3957 aa3.83□□□□□ -1.8
CNOT4-205ENST00000423368 KRTAP10-3P60369 221 aa3.83□□□□□ -1.8
CNOT4-205ENST00000423368 SPRR1BP22528 89 aa3.82□□□□□ -1.8
CNOT4-205ENST00000423368 H1FX-AS1Q4G0G2 97 aa3.82□□□□□ -1.8
CNOT4-205ENST00000423368 ANK3Q12955 4377 aaKnown RBP3.82□□□□□ -1.8
CNOT4-205ENST00000423368 SMR3AQ99954 134 aa3.8□□□□□ -1.8
CNOT4-205ENST00000423368 COX6B2Q6YFQ2 88 aa3.78□□□□□ -1.8
CNOT4-205ENST00000423368 SPACA4Q8TDM5 124 aa3.78□□□□□ -1.8
CNOT4-205ENST00000423368 KRTAP1-5Q9BYS1 174 aa3.77□□□□□ -1.81
CNOT4-205ENST00000423368 RPL37P61927 97 aaKnown RBP3.74□□□□□ -1.81
CNOT4-205ENST00000423368 KRTAP24-1Q3LI83 254 aa3.73□□□□□ -1.81
CNOT4-205ENST00000423368 UBE2DNLQ8IWF7 75 aa3.72□□□□□ -1.81
CNOT4-205ENST00000423368 DNAH17Q9UFH2 4485 aa3.7□□□□□ -1.82
CNOT4-205ENST00000423368 H3BNG1 76 aa3.69□□□□□ -1.82
CNOT4-205ENST00000423368 KRTAP13-1Q8IUC0 172 aa3.69□□□□□ -1.82
CNOT4-205ENST00000423368 KRTAP13-4Q3LI77 160 aa3.68□□□□□ -1.82
CNOT4-205ENST00000423368 C9orf92A6NGG3 77 aa3.66□□□□□ -1.82
CNOT4-205ENST00000423368 DNAH9Q9NYC9 4486 aa3.66□□□□□ -1.82
CNOT4-205ENST00000423368 CMYA5Q8N3K9 4069 aa3.65□□□□□ -1.83
CNOT4-205ENST00000423368 KRTAP10-11P60412 298 aa3.65□□□□□ -1.83
CNOT4-205ENST00000423368 DNAH8Q96JB1 4490 aa3.64□□□□□ -1.83
CNOT4-205ENST00000423368 VPS13DQ5THJ4 4388 aa3.64□□□□□ -1.83
CNOT4-205ENST00000423368 KMT2AQ03164 3969 aa3.61□□□□□ -1.83
CNOT4-205ENST00000423368 KRTAP12-2P59991 146 aa3.61□□□□□ -1.83
CNOT4-205ENST00000423368 KRTAP1-3Q8IUG1 177 aa3.61□□□□□ -1.83
CNOT4-205ENST00000423368 S4R3F8 94 aa3.61□□□□□ -1.83
CNOT4-205ENST00000423368 HUWE1Q7Z6Z7 4374 aaKnown RBP3.61□□□□□ -1.83
CNOT4-205ENST00000423368 KRTAP19-4Q3LI73 84 aa3.61□□□□□ -1.83
CNOT4-205ENST00000423368 DNAH7Q8WXX0 4024 aa3.6□□□□□ -1.83
CNOT4-205ENST00000423368 HECTD4Q9Y4D8 3996 aa3.6□□□□□ -1.83
CNOT4-205ENST00000423368 PLAC4Q8WY50 150 aa3.6□□□□□ -1.83
CNOT4-205ENST00000423368 KRTAP10-2P60368 255 aa3.59□□□□□ -1.84
CNOT4-205ENST00000423368 KRTAP21-3Q3LHN1 58 aa3.58□□□□□ -1.84
CNOT4-205ENST00000423368 KRTAP10-8P60410 259 aa3.57□□□□□ -1.84
CNOT4-205ENST00000423368 KRTAP1-1Q07627 177 aa3.56□□□□□ -1.84
CNOT4-205ENST00000423368 DNAH1Q9P2D7 4330 aa3.55□□□□□ -1.84
CNOT4-205ENST00000423368 KRTAP13-2Q52LG2 175 aa3.54□□□□□ -1.84
CNOT4-205ENST00000423368 KRTAP10-6P60371 365 aaPredicted RBP3.53□□□□□ -1.84
CNOT4-205ENST00000423368 KRTAP12-1P59990 96 aa3.46□□□□□ -1.86
CNOT4-205ENST00000423368 XP32Q5T750 250 aa3.46□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms