RNA–Protein interactions for RNA: ENST00000421756.5

MCF2L-213, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 1 (best) BASIC

Gene MCF2L, Length 3,560 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-213ENST00000421756 LRP1BQ9NZR2 4599 aa7.89□□□□□ -1.15
MCF2L-213ENST00000421756 SEC61GP60059 68 aa7.88□□□□□ -1.15
MCF2L-213ENST00000421756 DYNC2H1Q8NCM8 4307 aaKnown RBP7.88□□□□□ -1.15
MCF2L-213ENST00000421756 LCE6AA0A183 80 aa7.87□□□□□ -1.15
MCF2L-213ENST00000421756 V9GYY9 64 aa7.86□□□□□ -1.15
MCF2L-213ENST00000421756 A8MU10 97 aa7.85□□□□□ -1.15
MCF2L-213ENST00000421756 C1orf195Q5TG92 126 aa7.85□□□□□ -1.15
MCF2L-213ENST00000421756 CD164Q04900 197 aa7.85□□□□□ -1.15
MCF2L-213ENST00000421756 MRPL34Q9BQ48 92 aaKnown RBP7.85□□□□□ -1.15
MCF2L-213ENST00000421756 LINC00483Q53H64 154 aa7.84□□□□□ -1.16
MCF2L-213ENST00000421756 SPAG11AQ6PDA7 123 aa7.84□□□□□ -1.16
MCF2L-213ENST00000421756 Q5W150 140 aa7.83□□□□□ -1.16
MCF2L-213ENST00000421756 PRR15LQ9BU68 103 aa7.82□□□□□ -1.16
MCF2L-213ENST00000421756 FLG2Q5D862 2391 aaPredicted RBP7.82□□□□□ -1.16
MCF2L-213ENST00000421756 DNAH5Q8TE73 4624 aa7.81□□□□□ -1.16
MCF2L-213ENST00000421756 COA5Q86WW8 74 aa7.8□□□□□ -1.16
MCF2L-213ENST00000421756 DMBT1Q9UGM3 2413 aaPredicted RBP7.8□□□□□ -1.16
MCF2L-213ENST00000421756 CHKB-CPT1BH3BT56 60 aa7.79□□□□□ -1.16
MCF2L-213ENST00000421756 PLA2G1BP04054 148 aaKnown RBP7.79□□□□□ -1.16
MCF2L-213ENST00000421756 Q8N9P0 234 aaPredicted RBP7.79□□□□□ -1.16
MCF2L-213ENST00000421756 PKHD1P08F94 4074 aa7.79□□□□□ -1.16
MCF2L-213ENST00000421756 KRTAP13-2Q52LG2 175 aa7.77□□□□□ -1.17
MCF2L-213ENST00000421756 SPTSSBQ8NFR3 76 aa7.76□□□□□ -1.17
MCF2L-213ENST00000421756 PRR26Q8N8Z3 221 aa7.76□□□□□ -1.17
MCF2L-213ENST00000421756 IGKV2D-30A0A075B6S6 120 aa7.75□□□□□ -1.17
MCF2L-213ENST00000421756 IGKV2-30P06310 120 aa7.75□□□□□ -1.17
MCF2L-213ENST00000421756 C4orf48Q5BLP8 95 aa7.75□□□□□ -1.17
MCF2L-213ENST00000421756 VPS13BQ7Z7G8 4022 aa7.74□□□□□ -1.17
MCF2L-213ENST00000421756 LINC00313P59037 77 aa7.74□□□□□ -1.17
MCF2L-213ENST00000421756 CYP4F30PQ9H0H9 118 aa7.74□□□□□ -1.17
MCF2L-213ENST00000421756 FAT2Q9NYQ8 4349 aa7.73□□□□□ -1.17
MCF2L-213ENST00000421756 FAT1Q14517 4588 aa7.73□□□□□ -1.17
MCF2L-213ENST00000421756 TP53AIP1Q9HCN2 124 aa7.73□□□□□ -1.17
MCF2L-213ENST00000421756 ALMS1Q8TCU4 4167 aa7.72□□□□□ -1.17
MCF2L-213ENST00000421756 TYMSOSQ8TAI1 123 aa7.71□□□□□ -1.18
MCF2L-213ENST00000421756 A6NED7 52 aa7.7□□□□□ -1.18
MCF2L-213ENST00000421756 H3BPC8 53 aa7.69□□□□□ -1.18
MCF2L-213ENST00000421756 SSBP3-AS1Q7Z2R9 100 aa7.68□□□□□ -1.18
MCF2L-213ENST00000421756 IGLV7-46A0A075B6I9 117 aa7.68□□□□□ -1.18
MCF2L-213ENST00000421756 HRES1P13985 223 aa7.67□□□□□ -1.18
MCF2L-213ENST00000421756 C9orf92A6NGG3 77 aa7.67□□□□□ -1.18
MCF2L-213ENST00000421756 SPINK1P00995 79 aa7.67□□□□□ -1.18
MCF2L-213ENST00000421756 Q1T7F1 81 aa7.67□□□□□ -1.18
MCF2L-213ENST00000421756 Q5VV11 94 aa7.65□□□□□ -1.18
MCF2L-213ENST00000421756 SPANXA2-OT1Q8N9U9 137 aa7.65□□□□□ -1.18
MCF2L-213ENST00000421756 PMAIP1Q13794 54 aa7.62□□□□□ -1.19
MCF2L-213ENST00000421756 ASB16-AS1Q495Z4 193 aa7.62□□□□□ -1.19
MCF2L-213ENST00000421756 KRTAP1-4P0C5Y4 121 aa7.61□□□□□ -1.19
MCF2L-213ENST00000421756 LOC101927531A0A1B0GV80 90 aa7.59□□□□□ -1.2
MCF2L-213ENST00000421756 Q8N1X5 172 aa7.58□□□□□ -1.2
MCF2L-213ENST00000421756 Q6ZSA8 131 aa7.57□□□□□ -1.2
MCF2L-213ENST00000421756 PKD1P98161 4303 aa7.57□□□□□ -1.2
MCF2L-213ENST00000421756 LIMD2Q9BT23 127 aa7.56□□□□□ -1.2
MCF2L-213ENST00000421756 SPINK7P58062 85 aa7.54□□□□□ -1.2
MCF2L-213ENST00000421756 FAM229AH3BQW9 127 aa7.53□□□□□ -1.2
MCF2L-213ENST00000421756 LINC00304Q8N9R0 145 aa7.53□□□□□ -1.2
MCF2L-213ENST00000421756 DYNC1H1Q14204 4646 aaKnown RBP7.53□□□□□ -1.2
MCF2L-213ENST00000421756 SACSQ9NZJ4 4579 aa7.53□□□□□ -1.2
MCF2L-213ENST00000421756 C8orf87E5RJ46 101 aa7.53□□□□□ -1.2
MCF2L-213ENST00000421756 KMT2CQ8NEZ4 4911 aaKnown RBP7.53□□□□□ -1.2
MCF2L-213ENST00000421756 C7orf65Q6ZTY9 151 aa7.52□□□□□ -1.21
MCF2L-213ENST00000421756 LCA10Q71F78 164 aa7.51□□□□□ -1.21
MCF2L-213ENST00000421756 ACYP2P14621 99 aa7.5□□□□□ -1.21
MCF2L-213ENST00000421756 MYCBP2O75592 4640 aa7.48□□□□□ -1.21
MCF2L-213ENST00000421756 KRTAP13-3Q3SY46 172 aa7.48□□□□□ -1.21
MCF2L-213ENST00000421756 LRP1Q07954 4544 aaKnown RBP7.44□□□□□ -1.22
MCF2L-213ENST00000421756 KRTAP16-1A8MUX0 517 aa7.43□□□□□ -1.22
MCF2L-213ENST00000421756 A0A1B0GU69 56 aa7.41□□□□□ -1.22
MCF2L-213ENST00000421756 LINC01558Q9Y6Z2 57 aa7.41□□□□□ -1.22
MCF2L-213ENST00000421756 Q75L30 129 aa7.4□□□□□ -1.22
MCF2L-213ENST00000421756 APOBP04114 4563 aaKnown RBP7.38□□□□□ -1.23
MCF2L-213ENST00000421756 DMAC1Q96GE9 116 aa7.37□□□□□ -1.23
MCF2L-213ENST00000421756 RBM12B-AS1Q9P1G2 102 aa7.33□□□□□ -1.24
MCF2L-213ENST00000421756 CDC42SE1Q9NRR8 79 aa7.31□□□□□ -1.24
MCF2L-213ENST00000421756 FAT3Q8TDW7 4589 aa7.29□□□□□ -1.24
MCF2L-213ENST00000421756 KTN1-AS1Q86SY8 53 aa7.28□□□□□ -1.24
MCF2L-213ENST00000421756 ATP11AUNQ6ZP68 121 aa7.26□□□□□ -1.25
MCF2L-213ENST00000421756 KIAA1109Q2LD37 5005 aa7.26□□□□□ -1.25
MCF2L-213ENST00000421756 RYR2Q92736 4967 aa7.26□□□□□ -1.25
MCF2L-213ENST00000421756 PRAC1Q96KF2 57 aa7.24□□□□□ -1.25
MCF2L-213ENST00000421756 A0A1B0GVY2 172 aa7.24□□□□□ -1.25
MCF2L-213ENST00000421756 ADM2Q7Z4H4 148 aa7.22□□□□□ -1.25
MCF2L-213ENST00000421756 MIR22HGQ0VDD5 57 aa7.21□□□□□ -1.26
MCF2L-213ENST00000421756 Q5VSD8 79 aa7.21□□□□□ -1.26
MCF2L-213ENST00000421756 RYR3Q15413 4870 aa7.19□□□□□ -1.26
MCF2L-213ENST00000421756 KRTAP10-4P60372 401 aaPredicted RBP7.18□□□□□ -1.26
MCF2L-213ENST00000421756 UQCR11O14957 56 aa7.17□□□□□ -1.26
MCF2L-213ENST00000421756 A6NN06 94 aa7.15□□□□□ -1.26
MCF2L-213ENST00000421756 KRTAP3-1Q9BYR8 98 aa7.12□□□□□ -1.27
MCF2L-213ENST00000421756 PKHD1L1Q86WI1 4243 aa7.12□□□□□ -1.27
MCF2L-213ENST00000421756 HSPG2P98160 4391 aa7.12□□□□□ -1.27
MCF2L-213ENST00000421756 SPATA8Q6RVD6 105 aa7.11□□□□□ -1.27
MCF2L-213ENST00000421756 RYR1P21817 5038 aa7.11□□□□□ -1.27
MCF2L-213ENST00000421756 KRTAP21-3Q3LHN1 58 aa7.1□□□□□ -1.27
MCF2L-213ENST00000421756 KRTAP17-1Q9BYP8 105 aa7.1□□□□□ -1.27
MCF2L-213ENST00000421756 A8MUU9 505 aa7.09□□□□□ -1.27
MCF2L-213ENST00000421756 C20orf166-AS1Q96NR2 134 aa7.08□□□□□ -1.28
MCF2L-213ENST00000421756 CRIPTQ9P021 101 aa7.05□□□□□ -1.28
MCF2L-213ENST00000421756 RPS29P62273 56 aaKnown RBP7.03□□□□□ -1.28
MCF2L-213ENST00000421756 A0A0D9SG42 100 aa7.03□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 791.9 ms