RNA–Protein interactions for RNA: ENST00000421069.5

VPS8-202, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 5

Gene VPS8, Length 552 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-202ENST00000421069 TMEM167AQ8TBQ9 72 aa0.98□□□□□ -2.25
VPS8-202ENST00000421069 LINC00308Q8TCZ7 52 aa0.98□□□□□ -2.25
VPS8-202ENST00000421069 DEFB104AQ8WTQ1 72 aa0.98□□□□□ -2.25
VPS8-202ENST00000421069 USMG5Q96IX5 58 aa0.98□□□□□ -2.25
VPS8-202ENST00000421069 RHPN1-AS1Q9BWJ2 59 aa0.98□□□□□ -2.25
VPS8-202ENST00000421069 KALRNO60229 2985 aa0.98□□□□□ -2.25
VPS8-202ENST00000421069 ANKRD11Q6UB99 2663 aaPredicted RBP0.98□□□□□ -2.25
VPS8-202ENST00000421069 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP0.97□□□□□ -2.257e-13■■■□□ 18.5
VPS8-202ENST00000421069 A0A0D9SG42 100 aa0.97□□□□□ -2.25
VPS8-202ENST00000421069 MRPL34Q9BQ48 92 aaKnown RBP0.97□□□□□ -2.25
VPS8-202ENST00000421069 TP53AIP1Q9HCN2 124 aa0.97□□□□□ -2.25
VPS8-202ENST00000421069 UBR5O95071 2799 aaPredicted RBP0.97□□□□□ -2.25
VPS8-202ENST00000421069 RELNP78509 3460 aa0.97□□□□□ -2.25
VPS8-202ENST00000421069 CHD6Q8TD26 2715 aa0.96□□□□□ -2.26
VPS8-202ENST00000421069 I3L2K1 104 aa0.96□□□□□ -2.26
VPS8-202ENST00000421069 K7EQZ3 153 aa0.96□□□□□ -2.26
VPS8-202ENST00000421069 SPART-AS1P0CW21 52 aa0.96□□□□□ -2.26
VPS8-202ENST00000421069 PRCDQ00LT1 54 aa0.96□□□□□ -2.26
VPS8-202ENST00000421069 WT1-ASQ06250 92 aa0.96□□□□□ -2.26
VPS8-202ENST00000421069 CLPSL2Q6UWE3 100 aa0.96□□□□□ -2.26
VPS8-202ENST00000421069 NOP10Q9NPE3 64 aaKnown RBP0.96□□□□□ -2.26
VPS8-202ENST00000421069 ASH1LQ9NR48 2969 aaKnown RBP0.96□□□□□ -2.26
VPS8-202ENST00000421069 USF3Q68DE3 2245 aa0.96□□□□□ -2.26
VPS8-202ENST00000421069 SPTA1P02549 2419 aa0.96□□□□□ -2.26
VPS8-202ENST00000421069 CREBBPQ92793 2442 aa0.96□□□□□ -2.26
VPS8-202ENST00000421069 SETXQ7Z333 2677 aaKnown RBP0.95□□□□□ -2.26
VPS8-202ENST00000421069 ZNF469Q96JG9 3925 aaPredicted RBP0.95□□□□□ -2.26
VPS8-202ENST00000421069 CSMD2Q7Z408 3487 aa0.95□□□□□ -2.26
VPS8-202ENST00000421069 NAV3Q8IVL0 2385 aa0.95□□□□□ -2.26
VPS8-202ENST00000421069 H3BUA1 57 aa0.95□□□□□ -2.26
VPS8-202ENST00000421069 K7EIM0 57 aa0.95□□□□□ -2.26
VPS8-202ENST00000421069 SMIM2Q9BVW6 85 aa0.95□□□□□ -2.26
VPS8-202ENST00000421069 MYO9AB2RTY4 2548 aa0.95□□□□□ -2.26
VPS8-202ENST00000421069 PTPN13Q12923 2485 aa0.95□□□□□ -2.26
VPS8-202ENST00000421069 ADGRG4Q8IZF6 3080 aa0.95□□□□□ -2.26
VPS8-202ENST00000421069 LAMA5O15230 3695 aa0.94□□□□□ -2.26
VPS8-202ENST00000421069 ALMS1Q8TCU4 4167 aa0.94□□□□□ -2.26
VPS8-202ENST00000421069 FLNBO75369 2602 aaKnown RBP0.94□□□□□ -2.26
VPS8-202ENST00000421069 OTOGQ6ZRI0 2925 aa0.94□□□□□ -2.26
VPS8-202ENST00000421069 NDUFA1O15239 70 aa0.94□□□□□ -2.26
VPS8-202ENST00000421069 SMR3BP02814 79 aaPredicted RBP0.94□□□□□ -2.26
VPS8-202ENST00000421069 C10orf95Q9H7T3 257 aa0.94□□□□□ -2.26
VPS8-202ENST00000421069 CELSR1Q9NYQ6 3014 aa0.94□□□□□ -2.26
VPS8-202ENST00000421069 CELSR2Q9HCU4 2923 aa0.94□□□□□ -2.26
VPS8-202ENST00000421069 POLQO75417 2590 aa0.94□□□□□ -2.26
VPS8-202ENST00000421069 NBASA2RRP1 2371 aa0.93□□□□□ -2.26
VPS8-202ENST00000421069 F8P00451 2351 aa0.93□□□□□ -2.26
VPS8-202ENST00000421069 NAV2Q8IVL1 2488 aa0.93□□□□□ -2.26
VPS8-202ENST00000421069 NOTCH1P46531 2555 aa0.93□□□□□ -2.26
VPS8-202ENST00000421069 PKDREJQ9NTG1 2253 aa0.93□□□□□ -2.26
VPS8-202ENST00000421069 H0YAA0 97 aa0.93□□□□□ -2.26
VPS8-202ENST00000421069 C6orf48Q9UBA6 75 aa0.93□□□□□ -2.26
VPS8-202ENST00000421069 PRO0255Q9UI72 69 aa0.93□□□□□ -2.26
VPS8-202ENST00000421069 DOPEY1Q5JWR5 2465 aa0.93□□□□□ -2.26
VPS8-202ENST00000421069 CFAP46Q8IYW2 2715 aa0.93□□□□□ -2.26
VPS8-202ENST00000421069 CRYBG3Q68DQ2 2970 aa0.93□□□□□ -2.26
VPS8-202ENST00000421069 HIVEP3Q5T1R4 2406 aa0.93□□□□□ -2.26
VPS8-202ENST00000421069 PDZD2O15018 2839 aa0.93□□□□□ -2.26
VPS8-202ENST00000421069 TLN1Q9Y490 2541 aaKnown RBP0.92□□□□□ -2.26
VPS8-202ENST00000421069 TEX15Q9BXT5 2789 aa0.92□□□□□ -2.26
VPS8-202ENST00000421069 SMG1Q96Q15 3661 aaKnown RBP0.92□□□□□ -2.26
VPS8-202ENST00000421069 UNC79Q9P2D8 2635 aa0.92□□□□□ -2.26
VPS8-202ENST00000421069 LRBAP50851 2863 aa0.92□□□□□ -2.26
VPS8-202ENST00000421069 CCDC168Q8NDH2 2452 aa0.92□□□□□ -2.26
VPS8-202ENST00000421069 USP9YO00507 2555 aaPredicted RBP0.92□□□□□ -2.26
VPS8-202ENST00000421069 LELP1Q5T871 98 aa0.92□□□□□ -2.26
VPS8-202ENST00000421069 COX6B2Q6YFQ2 88 aa0.92□□□□□ -2.26
VPS8-202ENST00000421069 WFDC10BQ8IUB3 73 aa0.92□□□□□ -2.26
VPS8-202ENST00000421069 PRRC2CQ9Y520 2896 aaKnown RBP0.92□□□□□ -2.26
VPS8-202ENST00000421069 SPTAN1Q13813 2472 aaKnown RBP0.92□□□□□ -2.26
VPS8-202ENST00000421069 ABCA12Q86UK0 2595 aa0.92□□□□□ -2.26
VPS8-202ENST00000421069 USP9XQ93008 2570 aaPredicted RBP0.92□□□□□ -2.26
VPS8-202ENST00000421069 SPG11Q96JI7 2443 aa0.91□□□□□ -2.26
VPS8-202ENST00000421069 ABCA2Q9BZC7 2435 aa0.91□□□□□ -2.26
VPS8-202ENST00000421069 JMJD1CQ15652 2540 aa0.91□□□□□ -2.26
VPS8-202ENST00000421069 SPTBN1Q01082 2364 aaKnown RBP0.91□□□□□ -2.26
VPS8-202ENST00000421069 PLCE1Q9P212 2302 aa0.91□□□□□ -2.26
VPS8-202ENST00000421069 COX6A2Q02221 97 aa0.91□□□□□ -2.26
VPS8-202ENST00000421069 WFDC13Q8IUB5 93 aa0.91□□□□□ -2.26
VPS8-202ENST00000421069 CNFNQ9BYD5 112 aa0.91□□□□□ -2.26
VPS8-202ENST00000421069 APLNQ9ULZ1 77 aa0.91□□□□□ -2.26
VPS8-202ENST00000421069 SPENQ96T58 3664 aaKnown RBP0.91□□□□□ -2.26
VPS8-202ENST00000421069 LRRK2Q5S007 2527 aa0.91□□□□□ -2.26
VPS8-202ENST00000421069 HIVEP1P15822 2718 aa0.91□□□□□ -2.26
VPS8-202ENST00000421069 C2CD3Q4AC94 2353 aa0.91□□□□□ -2.26
VPS8-202ENST00000421069 APCP25054 2843 aa0.91□□□□□ -2.26
VPS8-202ENST00000421069 AKAP6Q13023 2319 aa0.9□□□□□ -2.26
VPS8-202ENST00000421069 TEP1Q99973 2627 aaKnown RBP0.9□□□□□ -2.26
VPS8-202ENST00000421069 Q5VSD8 79 aa0.9□□□□□ -2.27
VPS8-202ENST00000421069 TOMM7Q9P0U1 55 aa0.9□□□□□ -2.27
VPS8-202ENST00000421069 ANKHD1Q8IWZ3 2542 aaKnown RBP0.9□□□□□ -2.27
VPS8-202ENST00000421069 MAST4O15021 2626 aa0.9□□□□□ -2.27
VPS8-202ENST00000421069 DCHS2Q6V1P9 2916 aa0.9□□□□□ -2.27
VPS8-202ENST00000421069 ITPR3Q14573 2671 aa0.9□□□□□ -2.27
VPS8-202ENST00000421069 HRNRQ86YZ3 2850 aaPredicted RBP0.9□□□□□ -2.27
VPS8-202ENST00000421069 CSMD1Q96PZ7 3565 aa0.9□□□□□ -2.27
VPS8-202ENST00000421069 PCNX1Q96RV3 2341 aa0.89□□□□□ -2.27
VPS8-202ENST00000421069 FLNAP21333 2647 aaKnown RBP0.89□□□□□ -2.27
VPS8-202ENST00000421069 FLNCQ14315 2725 aa0.89□□□□□ -2.27
VPS8-202ENST00000421069 NF1P21359 2839 aa0.89□□□□□ -2.27
Retrieved 100 of 20,778 RNA–protein pairs in 74.4 ms