RNA–Protein interactions for RNA: ENST00000420329.6

CRTC3-202, Transcript of CREB regulated transcription coactivator 3, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene CRTC3, Length 5,209 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRTC3-202ENST00000420329 KMT2BQ9UMN6 2715 aaPredicted RBP9.7□□□□□ -0.86
CRTC3-202ENST00000420329 LINC01554Q52M75 96 aa9.69□□□□□ -0.86
CRTC3-202ENST00000420329 KRTAP10-2P60368 255 aa9.69□□□□□ -0.86
CRTC3-202ENST00000420329 KRTAP10-1P60331 282 aa9.66□□□□□ -0.86
CRTC3-202ENST00000420329 DMDP11532 3685 aa9.65□□□□□ -0.86
CRTC3-202ENST00000420329 DMBT1Q9UGM3 2413 aaPredicted RBP9.64□□□□□ -0.87
CRTC3-202ENST00000420329 Q6ZRN7 208 aaPredicted RBP9.64□□□□□ -0.87
CRTC3-202ENST00000420329 MUC3AQ02505 3323 aa9.64□□□□□ -0.87
CRTC3-202ENST00000420329 CSAG1Q6PB30 78 aa9.6□□□□□ -0.87
CRTC3-202ENST00000420329 KRTAP13-1Q8IUC0 172 aa9.6□□□□□ -0.87
CRTC3-202ENST00000420329 CSMD1Q96PZ7 3565 aa9.56□□□□□ -0.88
CRTC3-202ENST00000420329 A8MU10 97 aa9.55□□□□□ -0.88
CRTC3-202ENST00000420329 SMG1Q96Q15 3661 aaKnown RBP9.55□□□□□ -0.88
CRTC3-202ENST00000420329 J3QL48 77 aa9.53□□□□□ -0.88
CRTC3-202ENST00000420329 COX6B2Q6YFQ2 88 aa9.53□□□□□ -0.88
CRTC3-202ENST00000420329 ASB16-AS1Q495Z4 193 aa9.5□□□□□ -0.89
CRTC3-202ENST00000420329 A6NN06 94 aa9.48□□□□□ -0.89
CRTC3-202ENST00000420329 Q6ZSA8 131 aa9.47□□□□□ -0.89
CRTC3-202ENST00000420329 SPATA8Q6RVD6 105 aa9.45□□□□□ -0.9
CRTC3-202ENST00000420329 FLG2Q5D862 2391 aaPredicted RBP9.45□□□□□ -0.9
CRTC3-202ENST00000420329 CELSR1Q9NYQ6 3014 aa9.44□□□□□ -0.9
CRTC3-202ENST00000420329 TENM4Q6N022 2769 aa9.44□□□□□ -0.9
CRTC3-202ENST00000420329 S4R3F8 94 aa9.43□□□□□ -0.9
CRTC3-202ENST00000420329 TENM3Q9P273 2699 aa9.41□□□□□ -0.9
CRTC3-202ENST00000420329 H1FX-AS1Q4G0G2 97 aa9.41□□□□□ -0.9
CRTC3-202ENST00000420329 KRTAP13-2Q52LG2 175 aa9.4□□□□□ -0.9
CRTC3-202ENST00000420329 RPL37P61927 97 aaKnown RBP9.35□□□□□ -0.91
CRTC3-202ENST00000420329 H3BS24 57 aa9.32□□□□□ -0.92
CRTC3-202ENST00000420329 SVEP1Q4LDE5 3571 aa9.32□□□□□ -0.92
CRTC3-202ENST00000420329 ROMO1P60602 79 aa9.28□□□□□ -0.92
CRTC3-202ENST00000420329 ADM2Q7Z4H4 148 aa9.28□□□□□ -0.92
CRTC3-202ENST00000420329 TENM1Q9UKZ4 2725 aa9.26□□□□□ -0.93
CRTC3-202ENST00000420329 Q5VSD8 79 aa9.25□□□□□ -0.93
CRTC3-202ENST00000420329 RPS29P62273 56 aaKnown RBP9.23□□□□□ -0.93
CRTC3-202ENST00000420329 CAMK2N1Q7Z7J9 78 aa9.23□□□□□ -0.93
CRTC3-202ENST00000420329 VWFP04275 2813 aa9.19□□□□□ -0.94
CRTC3-202ENST00000420329 PDZD2O15018 2839 aa9.19□□□□□ -0.94
CRTC3-202ENST00000420329 R4GN34 69 aa9.18□□□□□ -0.94
CRTC3-202ENST00000420329 LUZP6Q538Z0 58 aa9.16□□□□□ -0.94
CRTC3-202ENST00000420329 CUBNO60494 3623 aa9.14□□□□□ -0.95
CRTC3-202ENST00000420329 KRTAP25-1Q3LHN0 102 aa9.1□□□□□ -0.95
CRTC3-202ENST00000420329 M0QZ58 72 aa9.07□□□□□ -0.96
CRTC3-202ENST00000420329 FBN1P35555 2871 aaKnown RBP9.06□□□□□ -0.96
CRTC3-202ENST00000420329 SPENQ96T58 3664 aaKnown RBP9.05□□□□□ -0.96
CRTC3-202ENST00000420329 KRTAP1-4P0C5Y4 121 aa9.03□□□□□ -0.96
CRTC3-202ENST00000420329 SEC61BP60468 96 aaKnown RBP9.03□□□□□ -0.96
CRTC3-202ENST00000420329 A8MUU9 505 aa9.01□□□□□ -0.97
CRTC3-202ENST00000420329 TGP01266 2768 aa9.01□□□□□ -0.97
CRTC3-202ENST00000420329 C20orf166-AS1Q96NR2 134 aa8.99□□□□□ -0.97
CRTC3-202ENST00000420329 OTOGQ6ZRI0 2925 aa8.97□□□□□ -0.97
CRTC3-202ENST00000420329 NBPF19A0A087WUL8 3843 aa8.96□□□□□ -0.97
CRTC3-202ENST00000420329 KRTAP16-1A8MUX0 517 aa8.93□□□□□ -0.98
CRTC3-202ENST00000420329 PKD1L1Q8TDX9 2849 aa8.91□□□□□ -0.98
CRTC3-202ENST00000420329 M0R2T5 61 aa8.89□□□□□ -0.99
CRTC3-202ENST00000420329 BSNQ9UPA5 3926 aa8.89□□□□□ -0.99
CRTC3-202ENST00000420329 CSMD2Q7Z408 3487 aa8.88□□□□□ -0.99
CRTC3-202ENST00000420329 TENM2Q9NT68 2774 aa8.87□□□□□ -0.99
CRTC3-202ENST00000420329 KRTAP13-3Q3SY46 172 aa8.86□□□□□ -0.99
CRTC3-202ENST00000420329 H0YAA0 97 aa8.83□□□□□ -1
CRTC3-202ENST00000420329 ZFHX3Q15911 3703 aa8.75□□□□□ -1.01
CRTC3-202ENST00000420329 A0A0A0MQY5 61 aa8.74□□□□□ -1.01
CRTC3-202ENST00000420329 ANK3Q12955 4377 aaKnown RBP8.72□□□□□ -1.01
CRTC3-202ENST00000420329 NDUFAF8A1L188 74 aa8.68□□□□□ -1.02
CRTC3-202ENST00000420329 XP32Q5T750 250 aa8.67□□□□□ -1.02
CRTC3-202ENST00000420329 TRRAPQ9Y4A5 3859 aa8.67□□□□□ -1.02
CRTC3-202ENST00000420329 SRRM2Q9UQ35 2752 aaKnown RBP8.62□□□□□ -1.03
CRTC3-202ENST00000420329 C10orf95Q9H7T3 257 aa8.62□□□□□ -1.03
CRTC3-202ENST00000420329 FBN3Q75N90 2809 aa8.6□□□□□ -1.03
CRTC3-202ENST00000420329 KRTAP21-3Q3LHN1 58 aa8.57□□□□□ -1.04
CRTC3-202ENST00000420329 PLAC4Q8WY50 150 aa8.55□□□□□ -1.04
CRTC3-202ENST00000420329 VPS13CQ709C8 3753 aa8.51□□□□□ -1.05
CRTC3-202ENST00000420329 P0C880 135 aa8.5□□□□□ -1.05
CRTC3-202ENST00000420329 MEGF8Q7Z7M0 2845 aa8.43□□□□□ -1.06
CRTC3-202ENST00000420329 TPRXLQ17RH7 258 aa8.36□□□□□ -1.07
CRTC3-202ENST00000420329 TNP1P09430 55 aa8.36□□□□□ -1.07
CRTC3-202ENST00000420329 KRTAP3-1Q9BYR8 98 aa8.35□□□□□ -1.07
CRTC3-202ENST00000420329 A0A1B0GVY2 172 aa8.33□□□□□ -1.08
CRTC3-202ENST00000420329 KRTAP10-8P60410 259 aa8.32□□□□□ -1.08
CRTC3-202ENST00000420329 COL7A1Q02388 2944 aa8.27□□□□□ -1.09
CRTC3-202ENST00000420329 PP632Q6XCG6 107 aa8.26□□□□□ -1.09
CRTC3-202ENST00000420329 KRTAP12-2P59991 146 aa8.22□□□□□ -1.09
CRTC3-202ENST00000420329 ZNF469Q96JG9 3925 aaPredicted RBP8.2□□□□□ -1.1
CRTC3-202ENST00000420329 HUWE1Q7Z6Z7 4374 aaKnown RBP8.14□□□□□ -1.11
CRTC3-202ENST00000420329 KRTAP12-1P59990 96 aa8.1□□□□□ -1.11
CRTC3-202ENST00000420329 KRTAP13-4Q3LI77 160 aa8.08□□□□□ -1.12
CRTC3-202ENST00000420329 AKAP9Q99996 3911 aa8.08□□□□□ -1.12
CRTC3-202ENST00000420329 KRTAP10-6P60371 365 aaPredicted RBP8.08□□□□□ -1.12
CRTC3-202ENST00000420329 CSMD3Q7Z407 3707 aa8.05□□□□□ -1.12
CRTC3-202ENST00000420329 KRTAP10-10P60014 251 aa7.86□□□□□ -1.15
CRTC3-202ENST00000420329 KRTAP3-3Q9BYR6 98 aa7.86□□□□□ -1.15
CRTC3-202ENST00000420329 KRTAP3-2Q9BYR7 98 aa7.85□□□□□ -1.15
CRTC3-202ENST00000420329 KRTAP10-4P60372 401 aaPredicted RBP7.8□□□□□ -1.16
CRTC3-202ENST00000420329 DNAH9Q9NYC9 4486 aa7.77□□□□□ -1.17
CRTC3-202ENST00000420329 MT1HL1P0DM35 61 aa7.74□□□□□ -1.17
CRTC3-202ENST00000420329 PLECQ15149 4684 aaKnown RBP7.7□□□□□ -1.18
CRTC3-202ENST00000420329 DNAH10Q8IVF4 4471 aa7.69□□□□□ -1.18
CRTC3-202ENST00000420329 DNAH1Q9P2D7 4330 aa7.66□□□□□ -1.18
CRTC3-202ENST00000420329 KRTAP15-1Q3LI76 137 aa7.62□□□□□ -1.19
CRTC3-202ENST00000420329 DNAH11Q96DT5 4516 aa7.59□□□□□ -1.19
CRTC3-202ENST00000420329 PRO2289Q9P1D8 64 aa7.59□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 69 ms