RNA–Protein interactions for RNA: ENST00000416330.1

XIST-201, X inactive specific transcript, humanhuman

TSL 2 BASIC

Gene XIST, Length 750 nt, Biotype lincRNA, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XIST-201ENST00000416330 CREBBPQ92793 2442 aa1.44□□□□□ -2.18
XIST-201ENST00000416330 WNK1Q9H4A3 2382 aa1.43□□□□□ -2.18
XIST-201ENST00000416330 FBN3Q75N90 2809 aa1.43□□□□□ -2.18
XIST-201ENST00000416330 VPS13DQ5THJ4 4388 aa1.42□□□□□ -2.18
XIST-201ENST00000416330 NBASA2RRP1 2371 aa1.41□□□□□ -2.18
XIST-201ENST00000416330 C9orf92A6NGG3 77 aa1.39□□□□□ -2.19
XIST-201ENST00000416330 H3BNG1 76 aa1.39□□□□□ -2.19
XIST-201ENST00000416330 VPS13BQ7Z7G8 4022 aa1.39□□□□□ -2.19
XIST-201ENST00000416330 TNP1P09430 55 aa1.38□□□□□ -2.19
XIST-201ENST00000416330 TMEM167AQ8TBQ9 72 aa1.38□□□□□ -2.19
XIST-201ENST00000416330 DMBT1Q9UGM3 2413 aaPredicted RBP1.38□□□□□ -2.19
XIST-201ENST00000416330 COL6A5A8TX70 2615 aa1.37□□□□□ -2.19
XIST-201ENST00000416330 KMT2AQ03164 3969 aa1.37□□□□□ -2.19
XIST-201ENST00000416330 MAP1BP46821 2468 aaKnown RBP1.37□□□□□ -2.19
XIST-201ENST00000416330 NAV2Q8IVL1 2488 aa1.37□□□□□ -2.19
XIST-201ENST00000416330 HUWE1Q7Z6Z7 4374 aaKnown RBP1.37□□□□□ -2.19
XIST-201ENST00000416330 NF1P21359 2839 aa1.36□□□□□ -2.19
XIST-201ENST00000416330 PKD1L1Q8TDX9 2849 aa1.36□□□□□ -2.19
XIST-201ENST00000416330 UNC79Q9P2D8 2635 aa1.33□□□□□ -2.2
XIST-201ENST00000416330 CRYBG3Q68DQ2 2970 aa1.33□□□□□ -2.2
XIST-201ENST00000416330 SETXQ7Z333 2677 aaKnown RBP1.31□□□□□ -2.2
XIST-201ENST00000416330 TENM2Q9NT68 2774 aa1.31□□□□□ -2.2
XIST-201ENST00000416330 HIVEP3Q5T1R4 2406 aa1.31□□□□□ -2.2
XIST-201ENST00000416330 NOTCH1P46531 2555 aa1.31□□□□□ -2.2
XIST-201ENST00000416330 SETD2Q9BYW2 2564 aaPredicted RBP1.31□□□□□ -2.2
XIST-201ENST00000416330 GCN1Q92616 2671 aaKnown RBP1.31□□□□□ -2.2
XIST-201ENST00000416330 DNAH2Q9P225 4427 aa1.29□□□□□ -2.2
XIST-201ENST00000416330 RPL39P5Q59GN2 51 aa1.29□□□□□ -2.2
XIST-201ENST00000416330 ZFYVE26Q68DK2 2539 aa1.29□□□□□ -2.2
XIST-201ENST00000416330 FLNCQ14315 2725 aa1.29□□□□□ -2.2
XIST-201ENST00000416330 SPART-AS1P0CW21 52 aa1.28□□□□□ -2.2
XIST-201ENST00000416330 DEFB110Q30KQ9 67 aa1.28□□□□□ -2.2
XIST-201ENST00000416330 PKD1P98161 4303 aa1.28□□□□□ -2.2
XIST-201ENST00000416330 PTPN13Q12923 2485 aa1.28□□□□□ -2.2
XIST-201ENST00000416330 DYNC2H1Q8NCM8 4307 aaKnown RBP1.27□□□□□ -2.21
XIST-201ENST00000416330 DNAH8Q96JB1 4490 aa1.27□□□□□ -2.21
XIST-201ENST00000416330 ZZEF1O43149 2961 aa1.27□□□□□ -2.21
XIST-201ENST00000416330 DCHS2Q6V1P9 2916 aa1.26□□□□□ -2.21
XIST-201ENST00000416330 DMXL1Q9Y485 3027 aa1.26□□□□□ -2.21
XIST-201ENST00000416330 ANK3Q12955 4377 aaKnown RBP1.26□□□□□ -2.21
XIST-201ENST00000416330 TACC2O95359 2948 aa1.26□□□□□ -2.21
XIST-201ENST00000416330 DNAH3Q8TD57 4116 aa1.25□□□□□ -2.21
XIST-201ENST00000416330 HSPG2P98160 4391 aa1.25□□□□□ -2.21
XIST-201ENST00000416330 FRYQ5TBA9 3013 aa1.24□□□□□ -2.21
XIST-201ENST00000416330 PKHD1L1Q86WI1 4243 aa1.24□□□□□ -2.21
XIST-201ENST00000416330 CCDC168Q8NDH2 2452 aa1.24□□□□□ -2.21
XIST-201ENST00000416330 ACANP16112 2415 aa1.24□□□□□ -2.21
XIST-201ENST00000416330 ACACAQ13085 2346 aa1.24□□□□□ -2.21
XIST-201ENST00000416330 USP24Q9UPU5 2620 aa1.24□□□□□ -2.21
XIST-201ENST00000416330 DEFB108AA8MXU0 73 aa1.23□□□□□ -2.21
XIST-201ENST00000416330 SPENQ96T58 3664 aaKnown RBP1.22□□□□□ -2.21
XIST-201ENST00000416330 STAB1Q9NY15 2570 aa1.22□□□□□ -2.21
XIST-201ENST00000416330 NBPF19A0A087WUL8 3843 aa1.22□□□□□ -2.21
XIST-201ENST00000416330 HECTD4Q9Y4D8 3996 aa1.22□□□□□ -2.21
XIST-201ENST00000416330 SYNE1Q8NF91 8797 aaKnown RBP1.21□□□□□ -2.22
XIST-201ENST00000416330 RIF1Q5UIP0 2472 aaKnown RBP1.21□□□□□ -2.22
XIST-201ENST00000416330 COL12A1Q99715 3063 aa1.2□□□□□ -2.22
XIST-201ENST00000416330 NSD1Q96L73 2696 aaPredicted RBP1.2□□□□□ -2.22
XIST-201ENST00000416330 EPG5Q9HCE0 2579 aa1.19□□□□□ -2.22
XIST-201ENST00000416330 TENM1Q9UKZ4 2725 aa1.19□□□□□ -2.22
XIST-201ENST00000416330 CUBNO60494 3623 aa1.19□□□□□ -2.22
XIST-201ENST00000416330 APC2O95996 2303 aa1.19□□□□□ -2.22
XIST-201ENST00000416330 MGAQ8IWI9 3026 aa1.18□□□□□ -2.22
XIST-201ENST00000416330 DNAH9Q9NYC9 4486 aa1.18□□□□□ -2.22
XIST-201ENST00000416330 MTORP42345 2549 aa1.18□□□□□ -2.22
XIST-201ENST00000416330 UTP20O75691 2785 aaKnown RBP1.17□□□□□ -2.22
XIST-201ENST00000416330 SPTBN4Q9H254 2564 aa1.17□□□□□ -2.22
XIST-201ENST00000416330 ZFHX4Q86UP3 3567 aa1.17□□□□□ -2.22
XIST-201ENST00000416330 RANBP2P49792 3224 aaKnown RBP1.16□□□□□ -2.22
XIST-201ENST00000416330 LRP1Q07954 4544 aaKnown RBP1.16□□□□□ -2.22
XIST-201ENST00000416330 NBEAL2Q6ZNJ1 2754 aa1.16□□□□□ -2.22
XIST-201ENST00000416330 USP9YO00507 2555 aaPredicted RBP1.15□□□□□ -2.22
XIST-201ENST00000416330 FLNBO75369 2602 aaKnown RBP1.15□□□□□ -2.23
XIST-201ENST00000416330 KRTAP21-1Q3LI58 79 aa1.15□□□□□ -2.23
XIST-201ENST00000416330 LPAP08519 4548 aa1.15□□□□□ -2.23
XIST-201ENST00000416330 KALRNO60229 2985 aa1.15□□□□□ -2.23
XIST-201ENST00000416330 COL7A1Q02388 2944 aa1.15□□□□□ -2.23
XIST-201ENST00000416330 APOBP04114 4563 aaKnown RBP1.15□□□□□ -2.23
XIST-201ENST00000416330 SPRR2DP22532 72 aa1.14□□□□□ -2.23
XIST-201ENST00000416330 LRRK2Q5S007 2527 aa1.14□□□□□ -2.23
XIST-201ENST00000416330 ITPR3Q14573 2671 aa1.13□□□□□ -2.23
XIST-201ENST00000416330 FAM186AA6NE01 2351 aa1.13□□□□□ -2.23
XIST-201ENST00000416330 DNAH7Q8WXX0 4024 aa1.12□□□□□ -2.23
XIST-201ENST00000416330 ANKRD11Q6UB99 2663 aaPredicted RBP1.12□□□□□ -2.23
XIST-201ENST00000416330 ANKHD1Q8IWZ3 2542 aaKnown RBP1.11□□□□□ -2.23
XIST-201ENST00000416330 DNAH6Q9C0G6 4158 aa1.1□□□□□ -2.23
XIST-201ENST00000416330 KRTAP8-1Q8IUC2 63 aa1.1□□□□□ -2.23
XIST-201ENST00000416330 HIVEP1P15822 2718 aa1.09□□□□□ -2.23
XIST-201ENST00000416330 CELSR3Q9NYQ7 3312 aa1.09□□□□□ -2.24
XIST-201ENST00000416330 NBEAQ8NFP9 2946 aa1.09□□□□□ -2.24
XIST-201ENST00000416330 SPTBN5Q9NRC6 3674 aaKnown RBP1.08□□□□□ -2.24
XIST-201ENST00000416330 SONP18583 2426 aaKnown RBP1.07□□□□□ -2.24
XIST-201ENST00000416330 NCOR2Q9Y618 2525 aa1.07□□□□□ -2.24
XIST-201ENST00000416330 FLGP20930 4061 aaPredicted RBP1.07□□□□□ -2.24
XIST-201ENST00000416330 A0A096LNI7 61 aa1.07□□□□□ -2.24
XIST-201ENST00000416330 SPRR2BP35325 72 aa1.06□□□□□ -2.24
XIST-201ENST00000416330 FAT3Q8TDW7 4589 aa1.06□□□□□ -2.24
XIST-201ENST00000416330 CFAP54Q96N23 3096 aa1.06□□□□□ -2.24
XIST-201ENST00000416330 CACNA1AO00555 2505 aa1.05□□□□□ -2.24
XIST-201ENST00000416330 H3BUX3 64 aa1.05□□□□□ -2.24
Retrieved 100 of 20,778 RNA–protein pairs in 70.4 ms