RNA–Protein interactions for RNA: ENST00000414786.6

SHANK3-202, Transcript of SH3 and multiple ankyrin repeat domains 3, humanhuman

TSL 5

Gene SHANK3, Length 7,394 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK3-202ENST00000414786 SPEGQ15772 3267 aa10.03□□□□□ -0.8
SHANK3-202ENST00000414786 ZNF292O60281 2723 aa10.02□□□□□ -0.81
SHANK3-202ENST00000414786 VCANP13611 3396 aa10□□□□□ -0.81
SHANK3-202ENST00000414786 ITPR2Q14571 2701 aa10□□□□□ -0.81
SHANK3-202ENST00000414786 KRTAP7-1Q8IUC3 87 aa9.98□□□□□ -0.81
SHANK3-202ENST00000414786 RPS29P62273 56 aaKnown RBP9.96□□□□□ -0.81
SHANK3-202ENST00000414786 COL12A1Q99715 3063 aa9.95□□□□□ -0.82
SHANK3-202ENST00000414786 UBR5O95071 2799 aaPredicted RBP9.91□□□□□ -0.82
SHANK3-202ENST00000414786 IGSF10Q6WRI0 2623 aa9.9□□□□□ -0.82
SHANK3-202ENST00000414786 LRBAP50851 2863 aa9.88□□□□□ -0.83
SHANK3-202ENST00000414786 XP32Q5T750 250 aa9.87□□□□□ -0.83
SHANK3-202ENST00000414786 PRO2289Q9P1D8 64 aa9.86□□□□□ -0.83
SHANK3-202ENST00000414786 UTP20O75691 2785 aaKnown RBP9.85□□□□□ -0.83
SHANK3-202ENST00000414786 LAMA1P25391 3075 aa9.85□□□□□ -0.83
SHANK3-202ENST00000414786 ITPR1Q14643 2758 aa9.83□□□□□ -0.84
SHANK3-202ENST00000414786 BOD1L1Q8NFC6 3051 aa9.79□□□□□ -0.84
SHANK3-202ENST00000414786 FRYLO94915 3013 aa9.79□□□□□ -0.84
SHANK3-202ENST00000414786 HIVEP1P15822 2718 aa9.78□□□□□ -0.84
SHANK3-202ENST00000414786 ATMQ13315 3056 aa9.78□□□□□ -0.84
SHANK3-202ENST00000414786 TACC2O95359 2948 aa9.77□□□□□ -0.84
SHANK3-202ENST00000414786 KRTAP13-1Q8IUC0 172 aa9.71□□□□□ -0.86
SHANK3-202ENST00000414786 CHD9Q3L8U1 2897 aa9.69□□□□□ -0.86
SHANK3-202ENST00000414786 PP632Q6XCG6 107 aa9.65□□□□□ -0.86
SHANK3-202ENST00000414786 ZZEF1O43149 2961 aa9.62□□□□□ -0.87
SHANK3-202ENST00000414786 NBEAQ8NFP9 2946 aa9.61□□□□□ -0.87
SHANK3-202ENST00000414786 ADGRG4Q8IZF6 3080 aa9.61□□□□□ -0.87
SHANK3-202ENST00000414786 H0YAA0 97 aa9.57□□□□□ -0.88
SHANK3-202ENST00000414786 CELSR2Q9HCU4 2923 aa9.55□□□□□ -0.88
SHANK3-202ENST00000414786 USP34Q70CQ2 3546 aa9.53□□□□□ -0.88
SHANK3-202ENST00000414786 MYO15AQ9UKN7 3530 aa9.51□□□□□ -0.89
SHANK3-202ENST00000414786 EYSQ5T1H1 3165 aa9.51□□□□□ -0.89
SHANK3-202ENST00000414786 SPTBN5Q9NRC6 3674 aaKnown RBP9.5□□□□□ -0.89
SHANK3-202ENST00000414786 CRCT1Q9UGL9 99 aa9.5□□□□□ -0.89
SHANK3-202ENST00000414786 KRTAP1-4P0C5Y4 121 aa9.46□□□□□ -0.9
SHANK3-202ENST00000414786 TPRXLQ17RH7 258 aa9.46□□□□□ -0.9
SHANK3-202ENST00000414786 TNRC18O15417 2968 aaPredicted RBP9.43□□□□□ -0.9
SHANK3-202ENST00000414786 DMXL1Q9Y485 3027 aa9.42□□□□□ -0.9
SHANK3-202ENST00000414786 ASPMQ8IZT6 3477 aa9.4□□□□□ -0.91
SHANK3-202ENST00000414786 KRTAP12-2P59991 146 aa9.38□□□□□ -0.91
SHANK3-202ENST00000414786 WDFY3Q8IZQ1 3526 aa9.38□□□□□ -0.91
SHANK3-202ENST00000414786 LOC400499M0QZD8 3231 aa9.36□□□□□ -0.91
SHANK3-202ENST00000414786 TENM1Q9UKZ4 2725 aa9.33□□□□□ -0.92
SHANK3-202ENST00000414786 CELSR1Q9NYQ6 3014 aa9.31□□□□□ -0.92
SHANK3-202ENST00000414786 KRTAP13-3Q3SY46 172 aa9.3□□□□□ -0.92
SHANK3-202ENST00000414786 DCHS2Q6V1P9 2916 aa9.29□□□□□ -0.92
SHANK3-202ENST00000414786 FLNCQ14315 2725 aa9.28□□□□□ -0.92
SHANK3-202ENST00000414786 KRTAP21-3Q3LHN1 58 aa9.27□□□□□ -0.93
SHANK3-202ENST00000414786 ZFHX4Q86UP3 3567 aa9.26□□□□□ -0.93
SHANK3-202ENST00000414786 DCHS1Q96JQ0 3298 aa9.25□□□□□ -0.93
SHANK3-202ENST00000414786 NF1P21359 2839 aa9.23□□□□□ -0.93
SHANK3-202ENST00000414786 KRTAP15-1Q3LI76 137 aa9.19□□□□□ -0.94
SHANK3-202ENST00000414786 TENM4Q6N022 2769 aa9.18□□□□□ -0.94
SHANK3-202ENST00000414786 TGP01266 2768 aa9.15□□□□□ -0.94
SHANK3-202ENST00000414786 NIPBLQ6KC79 2804 aaeCLIP9.11□□□□□ -0.95
SHANK3-202ENST00000414786 TENM3Q9P273 2699 aa9.09□□□□□ -0.95
SHANK3-202ENST00000414786 PDZD2O15018 2839 aa9.04□□□□□ -0.96
SHANK3-202ENST00000414786 FBN2P35556 2912 aa9.03□□□□□ -0.96
SHANK3-202ENST00000414786 TENM2Q9NT68 2774 aa9.02□□□□□ -0.97
SHANK3-202ENST00000414786 LAMA5O15230 3695 aa8.96□□□□□ -0.97
SHANK3-202ENST00000414786 NBPF19A0A087WUL8 3843 aa8.96□□□□□ -0.97
SHANK3-202ENST00000414786 CSMD1Q96PZ7 3565 aa8.96□□□□□ -0.97
SHANK3-202ENST00000414786 PKD1L1Q8TDX9 2849 aa8.95□□□□□ -0.98
SHANK3-202ENST00000414786 VWFP04275 2813 aa8.94□□□□□ -0.98
SHANK3-202ENST00000414786 KRTAP13-4Q3LI77 160 aa8.9□□□□□ -0.98
SHANK3-202ENST00000414786 ZANQ9Y493 2812 aa8.88□□□□□ -0.99
SHANK3-202ENST00000414786 KRTAP12-1P59990 96 aa8.79□□□□□ -1
SHANK3-202ENST00000414786 RELNP78509 3460 aa8.76□□□□□ -1.01
SHANK3-202ENST00000414786 DMDP11532 3685 aa8.66□□□□□ -1.02
SHANK3-202ENST00000414786 CUBNO60494 3623 aa8.64□□□□□ -1.03
SHANK3-202ENST00000414786 MXRA5Q9NR99 2828 aa8.62□□□□□ -1.03
SHANK3-202ENST00000414786 HRNRQ86YZ3 2850 aaPredicted RBP8.61□□□□□ -1.03
SHANK3-202ENST00000414786 SMG1Q96Q15 3661 aaKnown RBP8.61□□□□□ -1.03
SHANK3-202ENST00000414786 ZFHX3Q15911 3703 aa8.5□□□□□ -1.05
SHANK3-202ENST00000414786 SPENQ96T58 3664 aaKnown RBP8.49□□□□□ -1.05
SHANK3-202ENST00000414786 KRTAP10-12P60413 245 aa8.48□□□□□ -1.05
SHANK3-202ENST00000414786 SRRM2Q9UQ35 2752 aaKnown RBP8.45□□□□□ -1.06
SHANK3-202ENST00000414786 LORP23490 312 aaPredicted RBP8.45□□□□□ -1.06
SHANK3-202ENST00000414786 KRTAP3-1Q9BYR8 98 aa8.43□□□□□ -1.06
SHANK3-202ENST00000414786 SVEP1Q4LDE5 3571 aa8.39□□□□□ -1.07
SHANK3-202ENST00000414786 KRTAP10-5P60370 271 aa8.37□□□□□ -1.07
SHANK3-202ENST00000414786 COL7A1Q02388 2944 aa8.37□□□□□ -1.07
SHANK3-202ENST00000414786 MEGF8Q7Z7M0 2845 aa8.3□□□□□ -1.08
SHANK3-202ENST00000414786 MUC3AQ02505 3323 aa8.28□□□□□ -1.08
SHANK3-202ENST00000414786 KRTAP4-5Q9BYR2 181 aa8.26□□□□□ -1.09
SHANK3-202ENST00000414786 KRTAP10-6P60371 365 aaPredicted RBP8.25□□□□□ -1.09
SHANK3-202ENST00000414786 FBN3Q75N90 2809 aa8.2□□□□□ -1.1
SHANK3-202ENST00000414786 INE1O15225 51 aa8.16□□□□□ -1.1
SHANK3-202ENST00000414786 LCE3AQ5TA76 89 aa8.14□□□□□ -1.11
SHANK3-202ENST00000414786 KRTAP12-3P60328 96 aa8.14□□□□□ -1.11
SHANK3-202ENST00000414786 KRTAP8-1Q8IUC2 63 aa8.11□□□□□ -1.11
SHANK3-202ENST00000414786 FBN1P35555 2871 aaKnown RBP8.11□□□□□ -1.11
SHANK3-202ENST00000414786 CSMD2Q7Z408 3487 aa8.09□□□□□ -1.11
SHANK3-202ENST00000414786 CSMD3Q7Z407 3707 aa8.01□□□□□ -1.13
SHANK3-202ENST00000414786 TRRAPQ9Y4A5 3859 aa7.97□□□□□ -1.13
SHANK3-202ENST00000414786 MT1HL1P0DM35 61 aa7.96□□□□□ -1.13
SHANK3-202ENST00000414786 BSNQ9UPA5 3926 aa7.94□□□□□ -1.14
SHANK3-202ENST00000414786 VPS13CQ709C8 3753 aa7.87□□□□□ -1.15
SHANK3-202ENST00000414786 OTOGQ6ZRI0 2925 aa7.86□□□□□ -1.15
SHANK3-202ENST00000414786 KRTAP3-3Q9BYR6 98 aa7.8□□□□□ -1.16
SHANK3-202ENST00000414786 KRTAP3-2Q9BYR7 98 aa7.79□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 152 ms