RNA–Protein interactions for RNA: ENST00000413806.7

SMARCA4-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 5 BASIC

Gene SMARCA4, Length 5,512 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-202ENST00000413806 ATMQ13315 3056 aa7.33□□□□□ -1.24
SMARCA4-202ENST00000413806 LRBAP50851 2863 aa7.33□□□□□ -1.24
SMARCA4-202ENST00000413806 APCP25054 2843 aa7.31□□□□□ -1.24
SMARCA4-202ENST00000413806 LAMA1P25391 3075 aa7.29□□□□□ -1.24
SMARCA4-202ENST00000413806 CELSR3Q9NYQ7 3312 aa7.28□□□□□ -1.24
SMARCA4-202ENST00000413806 XP32Q5T750 250 aa7.28□□□□□ -1.24
SMARCA4-202ENST00000413806 HIVEP1P15822 2718 aa7.28□□□□□ -1.24
SMARCA4-202ENST00000413806 SZT2Q5T011 3432 aa7.27□□□□□ -1.25
SMARCA4-202ENST00000413806 ADGRG4Q8IZF6 3080 aa7.26□□□□□ -1.25
SMARCA4-202ENST00000413806 NBEAQ8NFP9 2946 aa7.26□□□□□ -1.25
SMARCA4-202ENST00000413806 COL12A1Q99715 3063 aa7.24□□□□□ -1.25
SMARCA4-202ENST00000413806 NIPBLQ6KC79 2804 aaeCLIP7.23□□□□□ -1.254e-6■□□□□ 9.9
SMARCA4-202ENST00000413806 VCANP13611 3396 aa7.23□□□□□ -1.25
SMARCA4-202ENST00000413806 TACC2O95359 2948 aa7.22□□□□□ -1.25
SMARCA4-202ENST00000413806 KRTAP10-8P60410 259 aa7.22□□□□□ -1.25
SMARCA4-202ENST00000413806 DNAH14Q0VDD8 3507 aa7.22□□□□□ -1.25
SMARCA4-202ENST00000413806 FRYLO94915 3013 aa7.18□□□□□ -1.26
SMARCA4-202ENST00000413806 COL6A3P12111 3177 aa7.17□□□□□ -1.26
SMARCA4-202ENST00000413806 BOD1L1Q8NFC6 3051 aa7.16□□□□□ -1.26
SMARCA4-202ENST00000413806 TPRXLQ17RH7 258 aa7.16□□□□□ -1.26
SMARCA4-202ENST00000413806 REV3LO60673 3130 aa7.15□□□□□ -1.26
SMARCA4-202ENST00000413806 DMXL2Q8TDJ6 3036 aa7.15□□□□□ -1.26
SMARCA4-202ENST00000413806 FREM2Q5SZK8 3169 aa7.14□□□□□ -1.27
SMARCA4-202ENST00000413806 EYSQ5T1H1 3165 aa7.14□□□□□ -1.27
SMARCA4-202ENST00000413806 HRNRQ86YZ3 2850 aaPredicted RBP7.14□□□□□ -1.27
SMARCA4-202ENST00000413806 TENM4Q6N022 2769 aa7.11□□□□□ -1.27
SMARCA4-202ENST00000413806 ASH1LQ9NR48 2969 aaKnown RBP7.09□□□□□ -1.27
SMARCA4-202ENST00000413806 ZZEF1O43149 2961 aa7.09□□□□□ -1.28
SMARCA4-202ENST00000413806 KRTAP13-3Q3SY46 172 aa7.08□□□□□ -1.28
SMARCA4-202ENST00000413806 SPTBN5Q9NRC6 3674 aaKnown RBP7.05□□□□□ -1.28
SMARCA4-202ENST00000413806 TNRC18O15417 2968 aaPredicted RBP7.04□□□□□ -1.28
SMARCA4-202ENST00000413806 CELSR2Q9HCU4 2923 aa7.03□□□□□ -1.28
SMARCA4-202ENST00000413806 ZANQ9Y493 2812 aa7.02□□□□□ -1.29
SMARCA4-202ENST00000413806 DCHS2Q6V1P9 2916 aa6.98□□□□□ -1.29
SMARCA4-202ENST00000413806 USP34Q70CQ2 3546 aa6.97□□□□□ -1.29
SMARCA4-202ENST00000413806 A0A1B0GVY2 172 aa6.95□□□□□ -1.3
SMARCA4-202ENST00000413806 CRYBG3Q68DQ2 2970 aa6.9□□□□□ -1.3
SMARCA4-202ENST00000413806 CFAP47Q6ZTR5 3102 aa6.9□□□□□ -1.31
SMARCA4-202ENST00000413806 KRTAP12-2P59991 146 aa6.88□□□□□ -1.31
SMARCA4-202ENST00000413806 DMXL1Q9Y485 3027 aa6.87□□□□□ -1.31
SMARCA4-202ENST00000413806 FBN2P35556 2912 aa6.84□□□□□ -1.31
SMARCA4-202ENST00000413806 KRTAP10-10P60014 251 aa6.83□□□□□ -1.32
SMARCA4-202ENST00000413806 PRO2289Q9P1D8 64 aa6.8□□□□□ -1.32
SMARCA4-202ENST00000413806 NF1P21359 2839 aa6.79□□□□□ -1.32
SMARCA4-202ENST00000413806 KRTAP13-4Q3LI77 160 aa6.72□□□□□ -1.33
SMARCA4-202ENST00000413806 TGP01266 2768 aa6.72□□□□□ -1.33
SMARCA4-202ENST00000413806 LOC400499M0QZD8 3231 aa6.72□□□□□ -1.33
SMARCA4-202ENST00000413806 TENM3Q9P273 2699 aa6.72□□□□□ -1.33
SMARCA4-202ENST00000413806 SPEGQ15772 3267 aa6.71□□□□□ -1.34
SMARCA4-202ENST00000413806 KRTAP12-1P59990 96 aa6.71□□□□□ -1.34
SMARCA4-202ENST00000413806 MXRA5Q9NR99 2828 aa6.7□□□□□ -1.34
SMARCA4-202ENST00000413806 CELSR1Q9NYQ6 3014 aa6.69□□□□□ -1.34
SMARCA4-202ENST00000413806 TENM1Q9UKZ4 2725 aa6.69□□□□□ -1.34
SMARCA4-202ENST00000413806 TENM2Q9NT68 2774 aa6.68□□□□□ -1.34
SMARCA4-202ENST00000413806 KRTAP3-1Q9BYR8 98 aa6.68□□□□□ -1.34
SMARCA4-202ENST00000413806 KRTAP15-1Q3LI76 137 aa6.66□□□□□ -1.34
SMARCA4-202ENST00000413806 PDZD2O15018 2839 aa6.62□□□□□ -1.35
SMARCA4-202ENST00000413806 INE1O15225 51 aa6.58□□□□□ -1.36
SMARCA4-202ENST00000413806 ANK3Q12955 4377 aaKnown RBP6.51□□□□□ -1.37
SMARCA4-202ENST00000413806 KRTAP10-6P60371 365 aaPredicted RBP6.5□□□□□ -1.37
SMARCA4-202ENST00000413806 WDFY3Q8IZQ1 3526 aa6.47□□□□□ -1.37
SMARCA4-202ENST00000413806 RELNP78509 3460 aa6.45□□□□□ -1.38
SMARCA4-202ENST00000413806 MYO15AQ9UKN7 3530 aa6.45□□□□□ -1.38
SMARCA4-202ENST00000413806 PKD1L1Q8TDX9 2849 aa6.42□□□□□ -1.38
SMARCA4-202ENST00000413806 OTOGQ6ZRI0 2925 aa6.35□□□□□ -1.39
SMARCA4-202ENST00000413806 ASPMQ8IZT6 3477 aa6.34□□□□□ -1.4
SMARCA4-202ENST00000413806 MT1HL1P0DM35 61 aa6.31□□□□□ -1.4
SMARCA4-202ENST00000413806 NBPF19A0A087WUL8 3843 aa6.31□□□□□ -1.4
SMARCA4-202ENST00000413806 ZFHX4Q86UP3 3567 aa6.29□□□□□ -1.4
SMARCA4-202ENST00000413806 VWFP04275 2813 aa6.28□□□□□ -1.4
SMARCA4-202ENST00000413806 KRTAP3-2Q9BYR7 98 aa6.28□□□□□ -1.4
SMARCA4-202ENST00000413806 DCHS1Q96JQ0 3298 aa6.28□□□□□ -1.4
SMARCA4-202ENST00000413806 KRTAP3-3Q9BYR6 98 aa6.27□□□□□ -1.41
SMARCA4-202ENST00000413806 KRTAP10-4P60372 401 aaPredicted RBP6.23□□□□□ -1.41
SMARCA4-202ENST00000413806 LAMA5O15230 3695 aa6.22□□□□□ -1.41
SMARCA4-202ENST00000413806 CSMD1Q96PZ7 3565 aa6.22□□□□□ -1.41
SMARCA4-202ENST00000413806 HUWE1Q7Z6Z7 4374 aaKnown RBP6.17□□□□□ -1.42
SMARCA4-202ENST00000413806 FBN1P35555 2871 aaKnown RBP6.17□□□□□ -1.42
SMARCA4-202ENST00000413806 SMG1Q96Q15 3661 aaKnown RBP6.17□□□□□ -1.42
SMARCA4-202ENST00000413806 FBN3Q75N90 2809 aa6.15□□□□□ -1.42
SMARCA4-202ENST00000413806 SRRM2Q9UQ35 2752 aaKnown RBP6.13□□□□□ -1.43
SMARCA4-202ENST00000413806 ALMS1Q8TCU4 4167 aa6.13□□□□□ -1.43
SMARCA4-202ENST00000413806 MEGF8Q7Z7M0 2845 aa6.1□□□□□ -1.43
SMARCA4-202ENST00000413806 DMDP11532 3685 aa6.08□□□□□ -1.44
SMARCA4-202ENST00000413806 KRTAP23-1A1A580 65 aa6.04□□□□□ -1.44
SMARCA4-202ENST00000413806 KRTAP10-12P60413 245 aa6.03□□□□□ -1.44
SMARCA4-202ENST00000413806 TRRAPQ9Y4A5 3859 aa6.02□□□□□ -1.45
SMARCA4-202ENST00000413806 ZFHX3Q15911 3703 aa5.98□□□□□ -1.45
SMARCA4-202ENST00000413806 SPENQ96T58 3664 aaKnown RBP5.96□□□□□ -1.45
SMARCA4-202ENST00000413806 BSNQ9UPA5 3926 aa5.96□□□□□ -1.46
SMARCA4-202ENST00000413806 SVEP1Q4LDE5 3571 aa5.95□□□□□ -1.46
SMARCA4-202ENST00000413806 KRTAP4-5Q9BYR2 181 aa5.94□□□□□ -1.46
SMARCA4-202ENST00000413806 KRTAP12-3P60328 96 aa5.88□□□□□ -1.47
SMARCA4-202ENST00000413806 CSMD2Q7Z408 3487 aa5.85□□□□□ -1.47
SMARCA4-202ENST00000413806 CUBNO60494 3623 aa5.85□□□□□ -1.47
SMARCA4-202ENST00000413806 COL7A1Q02388 2944 aa5.85□□□□□ -1.47
SMARCA4-202ENST00000413806 CRCT1Q9UGL9 99 aa5.85□□□□□ -1.47
SMARCA4-202ENST00000413806 DNAH9Q9NYC9 4486 aa5.84□□□□□ -1.48
SMARCA4-202ENST00000413806 LCE3AQ5TA76 89 aa5.83□□□□□ -1.48
SMARCA4-202ENST00000413806 LORP23490 312 aaPredicted RBP5.82□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 94.2 ms