RNA–Protein interactions for RNA: ENST00000411896.6

GRAMD1A-202, Transcript of GRAM domain containing 1A, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene GRAMD1A, Length 2,523 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GRAMD1A-202ENST00000411896 NDUFS5O43920 106 aa9.95□□□□□ -0.82
GRAMD1A-202ENST00000411896 MEGF8Q7Z7M0 2845 aa9.95□□□□□ -0.82
GRAMD1A-202ENST00000411896 C4orf48Q5BLP8 95 aa9.94□□□□□ -0.82
GRAMD1A-202ENST00000411896 TP53AIP1Q9HCN2 124 aa9.94□□□□□ -0.82
GRAMD1A-202ENST00000411896 ALMS1Q8TCU4 4167 aa9.94□□□□□ -0.82
GRAMD1A-202ENST00000411896 A0A087X002 238 aa9.94□□□□□ -0.82
GRAMD1A-202ENST00000411896 NOTCH2NLQ7Z3S9 236 aa9.94□□□□□ -0.82
GRAMD1A-202ENST00000411896 DNAH11Q96DT5 4516 aa9.94□□□□□ -0.82
GRAMD1A-202ENST00000411896 CDK2AP2O75956 126 aa9.93□□□□□ -0.82
GRAMD1A-202ENST00000411896 IGLV7-43P04211 117 aa9.93□□□□□ -0.82
GRAMD1A-202ENST00000411896 DNAH5Q8TE73 4624 aa9.93□□□□□ -0.82
GRAMD1A-202ENST00000411896 DNAH6Q9C0G6 4158 aa9.91□□□□□ -0.82
GRAMD1A-202ENST00000411896 CHKB-CPT1BH3BT56 60 aa9.91□□□□□ -0.82
GRAMD1A-202ENST00000411896 PCOTHQ58A44 107 aa9.91□□□□□ -0.82
GRAMD1A-202ENST00000411896 ATP11AUNQ6ZP68 121 aa9.91□□□□□ -0.82
GRAMD1A-202ENST00000411896 MRPL34Q9BQ48 92 aaKnown RBP9.9□□□□□ -0.83
GRAMD1A-202ENST00000411896 LY6G6CO95867 125 aa9.89□□□□□ -0.83
GRAMD1A-202ENST00000411896 SPTSSBQ8NFR3 76 aa9.89□□□□□ -0.83
GRAMD1A-202ENST00000411896 IGLV7-46A0A075B6I9 117 aa9.89□□□□□ -0.83
GRAMD1A-202ENST00000411896 LIMD2Q9BT23 127 aa9.88□□□□□ -0.83
GRAMD1A-202ENST00000411896 A6NN06 94 aa9.87□□□□□ -0.83
GRAMD1A-202ENST00000411896 TGP01266 2768 aa9.86□□□□□ -0.83
GRAMD1A-202ENST00000411896 SPINK6Q6UWN8 80 aa9.86□□□□□ -0.83
GRAMD1A-202ENST00000411896 CIRBP-AS1Q8TBR5 109 aa9.86□□□□□ -0.83
GRAMD1A-202ENST00000411896 Q8N9P0 234 aaPredicted RBP9.85□□□□□ -0.83
GRAMD1A-202ENST00000411896 KRTAP10-2P60368 255 aa9.84□□□□□ -0.83
GRAMD1A-202ENST00000411896 COA5Q86WW8 74 aa9.84□□□□□ -0.83
GRAMD1A-202ENST00000411896 LCA10Q71F78 164 aa9.83□□□□□ -0.84
GRAMD1A-202ENST00000411896 PRR15LQ9BU68 103 aa9.82□□□□□ -0.84
GRAMD1A-202ENST00000411896 C7orf65Q6ZTY9 151 aa9.8□□□□□ -0.84
GRAMD1A-202ENST00000411896 Q75L30 129 aa9.79□□□□□ -0.84
GRAMD1A-202ENST00000411896 SSBP3-AS1Q7Z2R9 100 aa9.78□□□□□ -0.84
GRAMD1A-202ENST00000411896 A6NED7 52 aa9.77□□□□□ -0.85
GRAMD1A-202ENST00000411896 Q5W150 140 aa9.77□□□□□ -0.85
GRAMD1A-202ENST00000411896 C8orf87E5RJ46 101 aa9.75□□□□□ -0.85
GRAMD1A-202ENST00000411896 KRTAP13-3Q3SY46 172 aa9.75□□□□□ -0.85
GRAMD1A-202ENST00000411896 LRP1BQ9NZR2 4599 aa9.74□□□□□ -0.85
GRAMD1A-202ENST00000411896 CDC42SE1Q9NRR8 79 aa9.74□□□□□ -0.85
GRAMD1A-202ENST00000411896 PKD1P98161 4303 aa9.74□□□□□ -0.85
GRAMD1A-202ENST00000411896 LOC101927531A0A1B0GV80 90 aa9.74□□□□□ -0.85
GRAMD1A-202ENST00000411896 KRTAP13-2Q52LG2 175 aa9.73□□□□□ -0.85
GRAMD1A-202ENST00000411896 KRTAP10-1P60331 282 aa9.72□□□□□ -0.85
GRAMD1A-202ENST00000411896 FAT2Q9NYQ8 4349 aa9.72□□□□□ -0.85
GRAMD1A-202ENST00000411896 HYDINQ4G0P3 5121 aa9.7□□□□□ -0.86
GRAMD1A-202ENST00000411896 Q6ZSA8 131 aa9.7□□□□□ -0.86
GRAMD1A-202ENST00000411896 HRES1P13985 223 aa9.69□□□□□ -0.86
GRAMD1A-202ENST00000411896 LINC00313P59037 77 aa9.64□□□□□ -0.87
GRAMD1A-202ENST00000411896 SPAG11AQ6PDA7 123 aa9.62□□□□□ -0.87
GRAMD1A-202ENST00000411896 H3BS24 57 aa9.61□□□□□ -0.87
GRAMD1A-202ENST00000411896 KRTAP1-4P0C5Y4 121 aa9.61□□□□□ -0.87
GRAMD1A-202ENST00000411896 RETNLBQ9BQ08 111 aa9.6□□□□□ -0.87
GRAMD1A-202ENST00000411896 LINC01558Q9Y6Z2 57 aa9.6□□□□□ -0.87
GRAMD1A-202ENST00000411896 VPS13BQ7Z7G8 4022 aa9.59□□□□□ -0.87
GRAMD1A-202ENST00000411896 KRTAP16-1A8MUX0 517 aa9.55□□□□□ -0.88
GRAMD1A-202ENST00000411896 FAM229AH3BQW9 127 aa9.55□□□□□ -0.88
GRAMD1A-202ENST00000411896 PRR26Q8N8Z3 221 aa9.53□□□□□ -0.88
GRAMD1A-202ENST00000411896 IGKV2-30P06310 120 aa9.51□□□□□ -0.89
GRAMD1A-202ENST00000411896 ACYP2P14621 99 aa9.49□□□□□ -0.89
GRAMD1A-202ENST00000411896 DMAC1Q96GE9 116 aa9.48□□□□□ -0.89
GRAMD1A-202ENST00000411896 SPINK7P58062 85 aa9.48□□□□□ -0.89
GRAMD1A-202ENST00000411896 PLA2G1BP04054 148 aaKnown RBP9.47□□□□□ -0.89
GRAMD1A-202ENST00000411896 LINC01554Q52M75 96 aa9.46□□□□□ -0.9
GRAMD1A-202ENST00000411896 TYMSOSQ8TAI1 123 aa9.46□□□□□ -0.9
GRAMD1A-202ENST00000411896 PRAC1Q96KF2 57 aa9.45□□□□□ -0.9
GRAMD1A-202ENST00000411896 SACSQ9NZJ4 4579 aa9.44□□□□□ -0.9
GRAMD1A-202ENST00000411896 PKHD1P08F94 4074 aa9.41□□□□□ -0.9
GRAMD1A-202ENST00000411896 SPINK1P00995 79 aa9.4□□□□□ -0.91
GRAMD1A-202ENST00000411896 IGKV2D-30A0A075B6S6 120 aa9.39□□□□□ -0.91
GRAMD1A-202ENST00000411896 DYNC1H1Q14204 4646 aaKnown RBP9.37□□□□□ -0.91
GRAMD1A-202ENST00000411896 ADM2Q7Z4H4 148 aa9.35□□□□□ -0.91
GRAMD1A-202ENST00000411896 LINC00304Q8N9R0 145 aa9.33□□□□□ -0.92
GRAMD1A-202ENST00000411896 SMR3BP02814 79 aaPredicted RBP9.29□□□□□ -0.92
GRAMD1A-202ENST00000411896 PKHD1L1Q86WI1 4243 aa9.27□□□□□ -0.93
GRAMD1A-202ENST00000411896 RPS29P62273 56 aaKnown RBP9.26□□□□□ -0.93
GRAMD1A-202ENST00000411896 APOBP04114 4563 aaKnown RBP9.25□□□□□ -0.93
GRAMD1A-202ENST00000411896 FAT1Q14517 4588 aa9.24□□□□□ -0.93
GRAMD1A-202ENST00000411896 A0A1B0GU69 56 aa9.24□□□□□ -0.93
GRAMD1A-202ENST00000411896 A0A1B0GVY2 172 aa9.19□□□□□ -0.94
GRAMD1A-202ENST00000411896 KRTAP10-4P60372 401 aaPredicted RBP9.19□□□□□ -0.94
GRAMD1A-202ENST00000411896 Q8N1X5 172 aa9.19□□□□□ -0.94
GRAMD1A-202ENST00000411896 C9orf92A6NGG3 77 aa9.16□□□□□ -0.94
GRAMD1A-202ENST00000411896 A8MUU9 505 aa9.11□□□□□ -0.95
GRAMD1A-202ENST00000411896 SPATA8Q6RVD6 105 aa9.11□□□□□ -0.95
GRAMD1A-202ENST00000411896 C20orf166-AS1Q96NR2 134 aa9.1□□□□□ -0.95
GRAMD1A-202ENST00000411896 CSAG1Q6PB30 78 aa9.09□□□□□ -0.95
GRAMD1A-202ENST00000411896 RYR2Q92736 4967 aa9.08□□□□□ -0.96
GRAMD1A-202ENST00000411896 UQCR11O14957 56 aa9.05□□□□□ -0.96
GRAMD1A-202ENST00000411896 MIR22HGQ0VDD5 57 aa9.05□□□□□ -0.96
GRAMD1A-202ENST00000411896 KRTAP3-1Q9BYR8 98 aa9□□□□□ -0.97
GRAMD1A-202ENST00000411896 FAT3Q8TDW7 4589 aa8.94□□□□□ -0.98
GRAMD1A-202ENST00000411896 KMT2CQ8NEZ4 4911 aaKnown RBP8.93□□□□□ -0.98
GRAMD1A-202ENST00000411896 TNXBP22105 4242 aa8.92□□□□□ -0.98
GRAMD1A-202ENST00000411896 FLG2Q5D862 2391 aaPredicted RBP8.9□□□□□ -0.98
GRAMD1A-202ENST00000411896 LRP1Q07954 4544 aaKnown RBP8.88□□□□□ -0.99
GRAMD1A-202ENST00000411896 ROMO1P60602 79 aa8.84□□□□□ -0.99
GRAMD1A-202ENST00000411896 RYR3Q15413 4870 aa8.84□□□□□ -1
GRAMD1A-202ENST00000411896 HSPG2P98160 4391 aa8.83□□□□□ -1
GRAMD1A-202ENST00000411896 COX6B2Q6YFQ2 88 aa8.82□□□□□ -1
GRAMD1A-202ENST00000411896 KRTAP10-8P60410 259 aa8.81□□□□□ -1
GRAMD1A-202ENST00000411896 H0YAA0 97 aa8.81□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms