RNA–Protein interactions for RNA: ENST00000406902.5

GRAMD4-202, Transcript of GRAM domain containing 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GRAMD4, Length 4,484 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GRAMD4-202ENST00000406902 Q6ZR54 194 aa8.62□□□□□ -1.03
GRAMD4-202ENST00000406902 ANAPC11Q9NYG5 84 aa8.62□□□□□ -1.03
GRAMD4-202ENST00000406902 CRYBG3Q68DQ2 2970 aa8.6□□□□□ -1.03
GRAMD4-202ENST00000406902 KMT2BQ9UMN6 2715 aaPredicted RBP8.6□□□□□ -1.03
GRAMD4-202ENST00000406902 STAB2Q8WWQ8 2551 aa8.58□□□□□ -1.04
GRAMD4-202ENST00000406902 DCHS2Q6V1P9 2916 aa8.58□□□□□ -1.04
GRAMD4-202ENST00000406902 Q5W150 140 aa8.57□□□□□ -1.04
GRAMD4-202ENST00000406902 SVEP1Q4LDE5 3571 aa8.57□□□□□ -1.04
GRAMD4-202ENST00000406902 SPENQ96T58 3664 aaKnown RBP8.56□□□□□ -1.04
GRAMD4-202ENST00000406902 CUBNO60494 3623 aa8.56□□□□□ -1.04
GRAMD4-202ENST00000406902 CSMD1Q96PZ7 3565 aa8.55□□□□□ -1.04
GRAMD4-202ENST00000406902 HIVEP1P15822 2718 aa8.54□□□□□ -1.04
GRAMD4-202ENST00000406902 PLAC8Q9NZF1 115 aa8.53□□□□□ -1.04
GRAMD4-202ENST00000406902 NF1P21359 2839 aa8.53□□□□□ -1.04
GRAMD4-202ENST00000406902 SPRR1BP22528 89 aa8.51□□□□□ -1.05
GRAMD4-202ENST00000406902 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.51□□□□□ -1.05
GRAMD4-202ENST00000406902 RPL37P61927 97 aaKnown RBP8.5□□□□□ -1.05
GRAMD4-202ENST00000406902 FBN2P35556 2912 aa8.49□□□□□ -1.05
GRAMD4-202ENST00000406902 M0R2T5 61 aa8.49□□□□□ -1.05
GRAMD4-202ENST00000406902 KRTAP26-1Q6PEX3 210 aa8.49□□□□□ -1.05
GRAMD4-202ENST00000406902 TENM4Q6N022 2769 aa8.45□□□□□ -1.06
GRAMD4-202ENST00000406902 SEC61BP60468 96 aaKnown RBP8.45□□□□□ -1.06
GRAMD4-202ENST00000406902 BSNQ9UPA5 3926 aa8.45□□□□□ -1.06
GRAMD4-202ENST00000406902 KRTAP21-3Q3LHN1 58 aa8.44□□□□□ -1.06
GRAMD4-202ENST00000406902 H1FX-AS1Q4G0G2 97 aa8.42□□□□□ -1.06
GRAMD4-202ENST00000406902 Q5VSD8 79 aa8.41□□□□□ -1.06
GRAMD4-202ENST00000406902 KRTAP4-16G5E9R7 235 aaPredicted RBP8.4□□□□□ -1.06
GRAMD4-202ENST00000406902 A8MUU9 505 aa8.4□□□□□ -1.07
GRAMD4-202ENST00000406902 CELSR1Q9NYQ6 3014 aa8.39□□□□□ -1.07
GRAMD4-202ENST00000406902 C20orf166-AS1Q96NR2 134 aa8.37□□□□□ -1.07
GRAMD4-202ENST00000406902 LINC00483Q53H64 154 aa8.33□□□□□ -1.08
GRAMD4-202ENST00000406902 NIPBLQ6KC79 2804 aaeCLIP8.32□□□□□ -1.08
GRAMD4-202ENST00000406902 PANO1I0J062 215 aa8.31□□□□□ -1.08
GRAMD4-202ENST00000406902 PDZD2O15018 2839 aa8.29□□□□□ -1.08
GRAMD4-202ENST00000406902 MXRA5Q9NR99 2828 aa8.29□□□□□ -1.08
GRAMD4-202ENST00000406902 KRTAP10-1P60331 282 aa8.27□□□□□ -1.09
GRAMD4-202ENST00000406902 KRTAP11-1Q8IUC1 163 aa8.27□□□□□ -1.09
GRAMD4-202ENST00000406902 KRTAP1-5Q9BYS1 174 aa8.26□□□□□ -1.09
GRAMD4-202ENST00000406902 CAMK2N1Q7Z7J9 78 aa8.26□□□□□ -1.09
GRAMD4-202ENST00000406902 NOTCH2NLQ7Z3S9 236 aa8.23□□□□□ -1.09
GRAMD4-202ENST00000406902 KRTAP10-2P60368 255 aa8.21□□□□□ -1.1
GRAMD4-202ENST00000406902 OTOGQ6ZRI0 2925 aa8.13□□□□□ -1.11
GRAMD4-202ENST00000406902 S4R3F8 94 aa8.11□□□□□ -1.11
GRAMD4-202ENST00000406902 CSMD2Q7Z408 3487 aa8.1□□□□□ -1.11
GRAMD4-202ENST00000406902 NBPF19A0A087WUL8 3843 aa8.1□□□□□ -1.11
GRAMD4-202ENST00000406902 R4GN34 69 aa8.05□□□□□ -1.12
GRAMD4-202ENST00000406902 ZFHX3Q15911 3703 aa7.98□□□□□ -1.13
GRAMD4-202ENST00000406902 RPS29P62273 56 aaKnown RBP7.97□□□□□ -1.13
GRAMD4-202ENST00000406902 KRTAP7-1Q8IUC3 87 aa7.97□□□□□ -1.13
GRAMD4-202ENST00000406902 TENM1Q9UKZ4 2725 aa7.95□□□□□ -1.14
GRAMD4-202ENST00000406902 C10orf95Q9H7T3 257 aa7.93□□□□□ -1.14
GRAMD4-202ENST00000406902 H0YAA0 97 aa7.92□□□□□ -1.14
GRAMD4-202ENST00000406902 Q6ZRN7 208 aaPredicted RBP7.92□□□□□ -1.14
GRAMD4-202ENST00000406902 PLAC4Q8WY50 150 aa7.92□□□□□ -1.14
GRAMD4-202ENST00000406902 ANK3Q12955 4377 aaKnown RBP7.9□□□□□ -1.14
GRAMD4-202ENST00000406902 TENM3Q9P273 2699 aa7.9□□□□□ -1.14
GRAMD4-202ENST00000406902 VPS13CQ709C8 3753 aa7.9□□□□□ -1.14
GRAMD4-202ENST00000406902 M0QZ58 72 aa7.85□□□□□ -1.15
GRAMD4-202ENST00000406902 P0C880 135 aa7.84□□□□□ -1.15
GRAMD4-202ENST00000406902 VWFP04275 2813 aa7.82□□□□□ -1.16
GRAMD4-202ENST00000406902 FBN1P35555 2871 aaKnown RBP7.77□□□□□ -1.17
GRAMD4-202ENST00000406902 KRTAP13-1Q8IUC0 172 aa7.75□□□□□ -1.17
GRAMD4-202ENST00000406902 PKD1L1Q8TDX9 2849 aa7.75□□□□□ -1.17
GRAMD4-202ENST00000406902 ZNF469Q96JG9 3925 aaPredicted RBP7.74□□□□□ -1.17
GRAMD4-202ENST00000406902 TGP01266 2768 aa7.7□□□□□ -1.18
GRAMD4-202ENST00000406902 AKAP9Q99996 3911 aa7.67□□□□□ -1.18
GRAMD4-202ENST00000406902 KRTAP13-2Q52LG2 175 aa7.64□□□□□ -1.19
GRAMD4-202ENST00000406902 TENM2Q9NT68 2774 aa7.58□□□□□ -1.2
GRAMD4-202ENST00000406902 TRRAPQ9Y4A5 3859 aa7.58□□□□□ -1.2
GRAMD4-202ENST00000406902 PP632Q6XCG6 107 aa7.55□□□□□ -1.2
GRAMD4-202ENST00000406902 SRRM2Q9UQ35 2752 aaKnown RBP7.53□□□□□ -1.2
GRAMD4-202ENST00000406902 KRTAP13-3Q3SY46 172 aa7.52□□□□□ -1.21
GRAMD4-202ENST00000406902 TPRXLQ17RH7 258 aa7.5□□□□□ -1.21
GRAMD4-202ENST00000406902 KRTAP10-8P60410 259 aa7.49□□□□□ -1.21
GRAMD4-202ENST00000406902 TNP1P09430 55 aa7.39□□□□□ -1.23
GRAMD4-202ENST00000406902 KRTAP15-1Q3LI76 137 aa7.34□□□□□ -1.23
GRAMD4-202ENST00000406902 FBN3Q75N90 2809 aa7.34□□□□□ -1.23
GRAMD4-202ENST00000406902 KRTAP1-4P0C5Y4 121 aa7.33□□□□□ -1.24
GRAMD4-202ENST00000406902 XP32Q5T750 250 aa7.32□□□□□ -1.24
GRAMD4-202ENST00000406902 COL7A1Q02388 2944 aa7.21□□□□□ -1.26
GRAMD4-202ENST00000406902 KRTAP12-2P59991 146 aa7.19□□□□□ -1.26
GRAMD4-202ENST00000406902 MEGF8Q7Z7M0 2845 aa7.18□□□□□ -1.26
GRAMD4-202ENST00000406902 KRTAP10-10P60014 251 aa7.16□□□□□ -1.26
GRAMD4-202ENST00000406902 HUWE1Q7Z6Z7 4374 aaKnown RBP7.16□□□□□ -1.26
GRAMD4-202ENST00000406902 PRO2289Q9P1D8 64 aa7.15□□□□□ -1.27
GRAMD4-202ENST00000406902 A0A1B0GVY2 172 aa7.13□□□□□ -1.27
GRAMD4-202ENST00000406902 KRTAP12-1P59990 96 aa7.09□□□□□ -1.27
GRAMD4-202ENST00000406902 CSMD3Q7Z407 3707 aa7.08□□□□□ -1.28
GRAMD4-202ENST00000406902 DNAH9Q9NYC9 4486 aa7.06□□□□□ -1.28
GRAMD4-202ENST00000406902 ANK2Q01484 3957 aa7□□□□□ -1.29
GRAMD4-202ENST00000406902 KRTAP13-4Q3LI77 160 aa6.97□□□□□ -1.29
GRAMD4-202ENST00000406902 KRTAP3-1Q9BYR8 98 aa6.97□□□□□ -1.29
GRAMD4-202ENST00000406902 DNHD1Q96M86 4753 aa6.95□□□□□ -1.3
GRAMD4-202ENST00000406902 INE1O15225 51 aa6.94□□□□□ -1.3
GRAMD4-202ENST00000406902 KRTAP10-6P60371 365 aaPredicted RBP6.92□□□□□ -1.3
GRAMD4-202ENST00000406902 CMYA5Q8N3K9 4069 aa6.87□□□□□ -1.31
GRAMD4-202ENST00000406902 DNAH3Q8TD57 4116 aa6.87□□□□□ -1.31
GRAMD4-202ENST00000406902 PRKDCP78527 4128 aaKnown RBP6.84□□□□□ -1.32
GRAMD4-202ENST00000406902 PLECQ15149 4684 aaKnown RBP6.83□□□□□ -1.32
GRAMD4-202ENST00000406902 STARD9Q9P2P6 4700 aa6.74□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 74.9 ms