RNA–Protein interactions for RNA: ENST00000406610.6

PARD3B-204, Transcript of par-3 family cell polarity regulator beta, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PARD3B, Length 8,174 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PARD3B-204ENST00000406610 RPS29P62273 56 aaKnown RBP8.47□□□□□ -1.05
PARD3B-204ENST00000406610 SPEGQ15772 3267 aa8.46□□□□□ -1.06
PARD3B-204ENST00000406610 LAMA1P25391 3075 aa8.45□□□□□ -1.06
PARD3B-204ENST00000406610 VCANP13611 3396 aa8.4□□□□□ -1.07
PARD3B-204ENST00000406610 KRTAP11-1Q8IUC1 163 aa8.38□□□□□ -1.07
PARD3B-204ENST00000406610 KRTAP10-8P60410 259 aa8.36□□□□□ -1.07
PARD3B-204ENST00000406610 BOD1L1Q8NFC6 3051 aa8.34□□□□□ -1.07
PARD3B-204ENST00000406610 USP34Q70CQ2 3546 aa8.33□□□□□ -1.08
PARD3B-204ENST00000406610 HIVEP1P15822 2718 aa8.33□□□□□ -1.08
PARD3B-204ENST00000406610 SZT2Q5T011 3432 aa8.3□□□□□ -1.08
PARD3B-204ENST00000406610 ATMQ13315 3056 aa8.3□□□□□ -1.08
PARD3B-204ENST00000406610 ZZEF1O43149 2961 aa8.29□□□□□ -1.08
PARD3B-204ENST00000406610 KRTAP13-2Q52LG2 175 aa8.28□□□□□ -1.08
PARD3B-204ENST00000406610 Q6ZRN7 208 aaPredicted RBP8.27□□□□□ -1.09
PARD3B-204ENST00000406610 PP632Q6XCG6 107 aa8.26□□□□□ -1.09
PARD3B-204ENST00000406610 CELSR2Q9HCU4 2923 aa8.21□□□□□ -1.1
PARD3B-204ENST00000406610 CHD9Q3L8U1 2897 aa8.2□□□□□ -1.1
PARD3B-204ENST00000406610 TACC2O95359 2948 aa8.2□□□□□ -1.1
PARD3B-204ENST00000406610 ADGRG4Q8IZF6 3080 aa8.2□□□□□ -1.1
PARD3B-204ENST00000406610 A0A1B0GVY2 172 aa8.19□□□□□ -1.1
PARD3B-204ENST00000406610 TENM1Q9UKZ4 2725 aa8.18□□□□□ -1.1
PARD3B-204ENST00000406610 NBEAQ8NFP9 2946 aa8.17□□□□□ -1.1
PARD3B-204ENST00000406610 KRTAP7-1Q8IUC3 87 aa8.14□□□□□ -1.11
PARD3B-204ENST00000406610 DMXL1Q9Y485 3027 aa8.12□□□□□ -1.11
PARD3B-204ENST00000406610 KRTAP13-1Q8IUC0 172 aa8.11□□□□□ -1.11
PARD3B-204ENST00000406610 P0C880 135 aa8.09□□□□□ -1.11
PARD3B-204ENST00000406610 FLNCQ14315 2725 aa8.09□□□□□ -1.11
PARD3B-204ENST00000406610 NF1P21359 2839 aa8.09□□□□□ -1.11
PARD3B-204ENST00000406610 PRO2289Q9P1D8 64 aa8.07□□□□□ -1.12
PARD3B-204ENST00000406610 CELSR1Q9NYQ6 3014 aa8.02□□□□□ -1.13
PARD3B-204ENST00000406610 KRTAP10-10P60014 251 aa8.02□□□□□ -1.13
PARD3B-204ENST00000406610 TNRC18O15417 2968 aaPredicted RBP8.01□□□□□ -1.13
PARD3B-204ENST00000406610 TENM3Q9P273 2699 aa8□□□□□ -1.13
PARD3B-204ENST00000406610 H0YAA0 97 aa8□□□□□ -1.13
PARD3B-204ENST00000406610 DCHS2Q6V1P9 2916 aa7.97□□□□□ -1.13
PARD3B-204ENST00000406610 NIPBLQ6KC79 2804 aaeCLIP7.97□□□□□ -1.13
PARD3B-204ENST00000406610 XP32Q5T750 250 aa7.97□□□□□ -1.13
PARD3B-204ENST00000406610 WDFY3Q8IZQ1 3526 aa7.96□□□□□ -1.13
PARD3B-204ENST00000406610 EYSQ5T1H1 3165 aa7.94□□□□□ -1.14
PARD3B-204ENST00000406610 TGP01266 2768 aa7.93□□□□□ -1.14
PARD3B-204ENST00000406610 ASPMQ8IZT6 3477 aa7.92□□□□□ -1.14
PARD3B-204ENST00000406610 SPTBN5Q9NRC6 3674 aaKnown RBP7.91□□□□□ -1.14
PARD3B-204ENST00000406610 LOC400499M0QZD8 3231 aa7.89□□□□□ -1.15
PARD3B-204ENST00000406610 ZFHX4Q86UP3 3567 aa7.88□□□□□ -1.15
PARD3B-204ENST00000406610 MYO15AQ9UKN7 3530 aa7.85□□□□□ -1.15
PARD3B-204ENST00000406610 PDZD2O15018 2839 aa7.83□□□□□ -1.16
PARD3B-204ENST00000406610 TENM4Q6N022 2769 aa7.81□□□□□ -1.16
PARD3B-204ENST00000406610 NBPF19A0A087WUL8 3843 aa7.79□□□□□ -1.16
PARD3B-204ENST00000406610 TPRXLQ17RH7 258 aa7.79□□□□□ -1.16
PARD3B-204ENST00000406610 FBN2P35556 2912 aa7.77□□□□□ -1.17
PARD3B-204ENST00000406610 DCHS1Q96JQ0 3298 aa7.75□□□□□ -1.17
PARD3B-204ENST00000406610 KRTAP1-4P0C5Y4 121 aa7.72□□□□□ -1.17
PARD3B-204ENST00000406610 VWFP04275 2813 aa7.71□□□□□ -1.18
PARD3B-204ENST00000406610 LAMA5O15230 3695 aa7.7□□□□□ -1.18
PARD3B-204ENST00000406610 PKD1L1Q8TDX9 2849 aa7.69□□□□□ -1.18
PARD3B-204ENST00000406610 ZANQ9Y493 2812 aa7.68□□□□□ -1.18
PARD3B-204ENST00000406610 KRTAP21-3Q3LHN1 58 aa7.6□□□□□ -1.19
PARD3B-204ENST00000406610 KRTAP12-2P59991 146 aa7.58□□□□□ -1.2
PARD3B-204ENST00000406610 KRTAP13-3Q3SY46 172 aa7.58□□□□□ -1.2
PARD3B-204ENST00000406610 CSMD1Q96PZ7 3565 aa7.54□□□□□ -1.2
PARD3B-204ENST00000406610 MXRA5Q9NR99 2828 aa7.51□□□□□ -1.21
PARD3B-204ENST00000406610 RELNP78509 3460 aa7.47□□□□□ -1.21
PARD3B-204ENST00000406610 HRNRQ86YZ3 2850 aaPredicted RBP7.47□□□□□ -1.21
PARD3B-204ENST00000406610 KRTAP13-4Q3LI77 160 aa7.46□□□□□ -1.22
PARD3B-204ENST00000406610 SRRM2Q9UQ35 2752 aaKnown RBP7.45□□□□□ -1.22
PARD3B-204ENST00000406610 TENM2Q9NT68 2774 aa7.44□□□□□ -1.22
PARD3B-204ENST00000406610 KRTAP15-1Q3LI76 137 aa7.4□□□□□ -1.22
PARD3B-204ENST00000406610 SMG1Q96Q15 3661 aaKnown RBP7.39□□□□□ -1.23
PARD3B-204ENST00000406610 SPENQ96T58 3664 aaKnown RBP7.38□□□□□ -1.23
PARD3B-204ENST00000406610 ZFHX3Q15911 3703 aa7.36□□□□□ -1.23
PARD3B-204ENST00000406610 COL7A1Q02388 2944 aa7.34□□□□□ -1.23
PARD3B-204ENST00000406610 KRTAP12-1P59990 96 aa7.31□□□□□ -1.24
PARD3B-204ENST00000406610 CUBNO60494 3623 aa7.22□□□□□ -1.25
PARD3B-204ENST00000406610 DMDP11532 3685 aa7.2□□□□□ -1.26
PARD3B-204ENST00000406610 MEGF8Q7Z7M0 2845 aa7.19□□□□□ -1.26
PARD3B-204ENST00000406610 CRCT1Q9UGL9 99 aa7.14□□□□□ -1.27
PARD3B-204ENST00000406610 INE1O15225 51 aa7.06□□□□□ -1.28
PARD3B-204ENST00000406610 SVEP1Q4LDE5 3571 aa7.05□□□□□ -1.28
PARD3B-204ENST00000406610 FBN3Q75N90 2809 aa7.03□□□□□ -1.28
PARD3B-204ENST00000406610 FBN1P35555 2871 aaKnown RBP6.96□□□□□ -1.3
PARD3B-204ENST00000406610 KRTAP3-1Q9BYR8 98 aa6.94□□□□□ -1.3
PARD3B-204ENST00000406610 MUC3AQ02505 3323 aa6.93□□□□□ -1.3
PARD3B-204ENST00000406610 KRTAP10-12P60413 245 aa6.9□□□□□ -1.3
PARD3B-204ENST00000406610 TRRAPQ9Y4A5 3859 aa6.89□□□□□ -1.31
PARD3B-204ENST00000406610 VPS13CQ709C8 3753 aa6.88□□□□□ -1.31
PARD3B-204ENST00000406610 CSMD3Q7Z407 3707 aa6.83□□□□□ -1.32
PARD3B-204ENST00000406610 KRTAP10-6P60371 365 aaPredicted RBP6.82□□□□□ -1.32
PARD3B-204ENST00000406610 OTOGQ6ZRI0 2925 aa6.78□□□□□ -1.32
PARD3B-204ENST00000406610 CSMD2Q7Z408 3487 aa6.72□□□□□ -1.33
PARD3B-204ENST00000406610 KRTAP12-3P60328 96 aa6.66□□□□□ -1.34
PARD3B-204ENST00000406610 KRTAP10-5P60370 271 aa6.58□□□□□ -1.36
PARD3B-204ENST00000406610 LCE3AQ5TA76 89 aa6.53□□□□□ -1.36
PARD3B-204ENST00000406610 BSNQ9UPA5 3926 aa6.51□□□□□ -1.37
PARD3B-204ENST00000406610 KRTAP3-3Q9BYR6 98 aa6.49□□□□□ -1.37
PARD3B-204ENST00000406610 KRTAP3-2Q9BYR7 98 aa6.48□□□□□ -1.37
PARD3B-204ENST00000406610 AKAP9Q99996 3911 aa6.47□□□□□ -1.37
PARD3B-204ENST00000406610 KRTAP23-1A1A580 65 aa6.39□□□□□ -1.39
PARD3B-204ENST00000406610 MT1HL1P0DM35 61 aa6.39□□□□□ -1.39
PARD3B-204ENST00000406610 KRTAP8-1Q8IUC2 63 aa6.38□□□□□ -1.39
PARD3B-204ENST00000406610 LORP23490 312 aaPredicted RBP6.25□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 108.2 ms